mRNA_P-littoralis_Contig632.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig632.14.1
Unique NamemRNA_P-littoralis_Contig632.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 8.060e-113
Identity = 184/330 (55.76%), Postives = 243/330 (73.64%), Query Frame = 1
Query:    1 CGGRLHGLCGEVEDPDGNDNHRICHTCFSKRSNL---SNAAKRKQEQGSLLQQGASKKINPGASKP--------RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            CGGRLHG+CGE E+  G + HR+C+ C +K+      S   KR   +  L   GA+ K    A K         R RL+ G++LEVLKLLD+K +  EI+RR+    +AI  I+ +R+ LE AAA++ARST+SKS+R GDFP+++K  + ++EEAR+VPLP+TR +IESFG+A R K +   +T A  K++L  F  SEKWVRN ++R+ + S VLHGEAGS+D  A AEG+  IR+AC +Y++ENIFNVDETG++Y+LLPKRTYLS  EKR++ARGTKGMKAKDRVSAYMCTNATG+ KVPM+IIG++KNPRCFR +P P+ YFSQANA
Sbjct:   29 CGGRLHGICGEPEEEGGQEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPSTPADAKERLRMFGASEKWVRNLVNRHNLTSFVLHGEAGSLDAEAAAEGMAAIRRACSKYKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAKNPRCFRSSPSPLTYFSQANA 358          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5KD82_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD82_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 3.510e-83
Identity = 153/323 (47.37%), Postives = 211/323 (65.33%), Query Frame = 1
Query:    1 CGGRLHGLCGEVEDPDGNDNHRICHTCFSKRSNLSNAAKRKQEQGSLLQQGASKKINPGASKP----RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            CGGRLHG CG V +   N+ H IC TC ++ S       +    G+   Q   +K   G SK     R RLD  +KL++LK+LDQKVS  +I+ RF C    IG+    R+ +E A A+     S K AR GDFP+VD++A+ ++++ARK  +P+TR  + SFG +AR   L    T+AA ++++E F   E+W +NF+ RN+++SV LHGEAGSVD  AI EG+ EIR  C++Y    IFNVDETG+ +KL+P+RTYLS +E R++ARG+K M  KDR+SA MC NA G+ KV M+IIG++K PRCF+    P+KYFSQ NA
Sbjct:   28 CGGRLHGNCGSVFED--NEQHLICSTCVARTSKRKGTPAK----GAGAGQSKRQKQTSGGSKKGTASRARLDSNKKLDILKMLDQKVSHAQIADRFKCSLRFIGTANAGRQKVETATAAGC--GSQKIARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSARATLLAGTATSAAVRERVEDFKAGERWAKNFVKRNQIQSVRLHGEAGSVDKEAIKEGMEEIRALCEKYPARFIFNVDETGLQWKLMPRRTYLSTSEDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMAIIGRAKEPRCFKNGGSPLKYFSQTNA 342          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5J7S2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S2_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.980e-80
Identity = 154/326 (47.24%), Postives = 214/326 (65.64%), Query Frame = 1
Query:    1 CGGRLHGLCGE-VEDPDGNDNHRICHTCFSKRSNLSNAAKRKQEQGSLLQQGASK--KINPGASKP----RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            CGGRLHG CG   ED   N+ HRIC TC ++ S      KRK         G SK  K   G  K     R RLD  +KLE+LK+LDQKVS  +I+ RF C    IG+++  R+ +E A A+    +S K+AR GDFP+VD++A+ ++++ARK  +P+TR  + SFG + R   L D  T+AA ++++E F   ++W +NF+ RN+++SV LHGEAGSVD  AI EG+ EIR  C++Y    I NVDE+G+ +KL+P+RTYLS +E R++ARG+K M  KD +SA MC NA G+ KV M+I+G++K PRCF+    P+KYFSQ NA
Sbjct:   28 CGGRLHGNCGSGFED---NEQHRICTTCVARTS------KRKATPAKGAGAGPSKRQKQTSGGCKKGTGFRARLDNNKKLEILKMLDQKVSHAQIADRFKCLLRFIGTVKAGRQKVETATAAGC--SSQKTARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSTRATLLADTATSAAVRERVEDFKAGKRWAKNFVKRNKIQSVRLHGEAGSVDKEAIKEGMEEIRALCEKYPARFIVNVDESGLQWKLMPRRTYLSTSEDRKTARGSKSMNFKDGLSAIMCCNADGTAKVYMAIMGRAKEPRCFKNGGSPLKYFSQTNA 342          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5JQU7_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU7_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 5.880e-79
Identity = 152/318 (47.80%), Postives = 207/318 (65.09%), Query Frame = 1
Query:    1 CGGRLHGLCGEVEDPDGNDNHRICHTCFSKRSNLSNAAKRKQEQGSLLQQGASK--KINPGASKP----RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIK 936
            CGGRLHG CG V +   N+ HRIC TC ++ S      KRK         G SK  K   G SK     R RLD  +KLE+LKLLDQKVS  +I+ RF C    IG+++  R+ +E A A+     S K+AR GDFP+VD++A+ ++++ARK  +P+TR  + SFG +AR   L D  T+AA ++++E F   E+W +NF+ RN+++SV LHGEAGSVD  AI E + EIR  C+ +    IFNVDETG+ +KL+P+RTYL  +E R++ARG+K M  KDR+SA MC NA G+ KV M IIG++K PRCF+    P+K
Sbjct:   28 CGGRLHGNCGSVFED--NEQHRICSTCVARTS------KRKATPAKGAGAGPSKRQKQTSGGSKKGTGSRARLDNNKKLEILKLLDQKVSHAQIADRFTCSLRFIGTVKAGRQKVEIATAAGC--GSQKAARKGDFPEVDEIALDLLDKARKAKMPVTRDVLRSFGRSARATLLADIATSAAVRERVEDFKAGERWAKNFVKRNKIQSVRLHGEAGSVDKEAIKEVMEEIRALCEIFPASFIFNVDETGLQWKLMPRRTYLFTSEDRKAARGSKSMHFKDRLSAIMCCNADGTAKVDMGIIGRAKEPRCFKNGGSPLK 335          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5LCM9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM9_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 6.260e-73
Identity = 137/306 (44.77%), Postives = 195/306 (63.73%), Query Frame = 1
Query:   52 NDNHRICHTCFSK----RSNLSNAAKRKQEQGSLLQQGASKKINPGASKPRRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            N+ HRIC  C +K    ++  ++   R Q +   +  G SKK  P    PR R DL  KLE+LKL+D KV+  +I+ RF C    + ++++ R+  EA AA      S KS R GDFP V+ +A+ ++E+ARK  +P+TR  + SFG +AR   L D   +   K +++ F   E+W +NF+ RN ++S   HGEAGSVD  AI   + E++  C +Y    IFNVDETG+ +KL+P+RTYLS +E++++ARG+KGM  KDR+SA M  NA G+  VPM+IIGK+K PRCF+  P P+KYFSQANA
Sbjct:    5 NEQHRICSACVAKDGKRKAPPADTGGRGQSKRPKVTNGGSKKSQPSRKGPRARPDLNAKLEMLKLMDAKVTHEQIADRFACSVRLVRNVKKNRQKHEAEAAXXXX-XSKKSLRKGDFPAVEAIALDLLEKARKAKMPVTREVLRSFGRSARATLLGDPAASKEVKARVQDFKAGERWAQNFVKRNNIQSARPHGEAGSVDKEAIEAAMEELKALCAKYSARFIFNVDETGLQWKLMPRRTYLSTSEEQKTARGSKGMFFKDRLSAIMSANADGTANVPMAIIGKAKEPRCFKDTPSPLKYFSQANA 309          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 9.190e-69
Identity = 140/302 (46.36%), Postives = 188/302 (62.25%), Query Frame = 1
Query:   25 CGEVEDPDGNDNHRICHTCFSKRSNL---SNAAKRKQEQGSLLQQGASKKINPGASKP--------RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSK 897
            CGE E+  G + HR+C+ C +K+      S   KR   +  L   GA+ K    A K         R RL+ G++LEVLKLLD+K +  EI+RR+    +AI  I+ +R+ LE AAA++ARST+SKS+R GDFP+++K  + ++EEAR+VPLP+TR +IESFG+A R K +   +T A  K++L  F  SEKW                                        Y++ENIFNVDETG++Y+LLPKRTYLS  EKR++ARGTKGMKAKDRVSAYMCTNATG+ KVPM+IIG++K
Sbjct:   16 CGEPEEEGGQEIHRVCNPCIAKKQKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTHAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPSTPADAKERLRMFGASEKW----------------------------------------YKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAK 277          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5L4D9_9PHAE (DDE-1 domain-containing protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D9_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 4.870e-65
Identity = 120/245 (48.98%), Postives = 164/245 (66.94%), Query Frame = 1
Query:  223 VLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            +LKL+DQKV+  +++ RF C    +  +++ RK  E  AA+  R  S K+ R G+ P+VD +A+ ++E+ARK  +P+TR  + SFG AAR   L D   +   K ++E F   E+W RNF+ RN + SV LHGEAGSV+  AI E + E++  C +Y    I NVDETG+ +KL+P+R YLS  E R++ARG+KGM  KDR+SA MC NA G+ KV MSIIGK+K PRCF   P P+KYFSQANA
Sbjct:    1 MLKLMDQKVTHEQLADRFKCSERLVRDVKKNRKKYETEAAAG-RGGSKKNVRTGNNPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASKEVKARVEDFKAGERWARNFVKRNSIDSVRLHGEAGSVNKEAIKEAMEELKALCAKYLARLIVNVDETGLQWKLMPRRMYLSNLEDRKTARGSKGMFFKDRLSAIMCANADGTAKVDMSIIGKAKGPRCFNDTPSPLKYFSQANA 244          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5JML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML3_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.240e-59
Identity = 133/310 (42.90%), Postives = 180/310 (58.06%), Query Frame = 1
Query:    4 GGRLHGLCGEVEDPDGNDNHRICHTCFSKRSNLSNAAKRKQEQGSLLQQGASKKINP--GASKP----RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFR 915
            GGRLHG CG V +   N+ HRIC TC ++ S      KRK         G SK++    G SK     R RLD  +KL+VLK+LD +VS  +I+ R  C     G+++  R+ +E A A+     S K+AR GDFP+V  M    V                          L D  T+AA + ++E F   E+W +NF+ RN+++S+  HGEAGSVD  AI EGL EIR  C++Y    IFNVDETG+ +KL+P+RTYLS +  R++ARG+K M  KDR+SA MC NA G+ KV M+IIG++K PRCF+
Sbjct:   29 GGRLHGNCGSVFED--NEQHRICSTCGARTS------KRKTTPAKGAGAGPSKRLKQTSGGSKKGTGSRARLDNNKKLKVLKMLDPEVSHAQIADRLKCSLRLSGTVKASRQKVETATAAGC--GSQKTARKGDFPEVPYMQCCDVGATL----------------------LADTATSAAVRDRVEDFKAGERWAKNFVKRNKIQSMRFHGEAGSVDKEAIKEGLEEIRDLCEKYPARFIFNVDETGLQWKLMPRRTYLSTSYDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMTIIGRAKEPRCFK 306          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5JWL9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL9_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 2.280e-58
Identity = 113/249 (45.38%), Postives = 161/249 (64.66%), Query Frame = 1
Query:  211 EKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            +KLE+LK +D KVS V+++ RF C    + ++R +RK +EAAAA  A +   K+AR GDFP+VDK+++ ++E+AR+  +P+TR    SFG +AR   L D  T+ A + ++E F   EKW + F+ RN+++SV LHGEAGSVD  AI EG+ EIR  C +Y    IFNVD+TG+ +KL+P+RT                M  KDR+SA MC NA G  KV ++IIG++K PRC +    P+K F+Q NA
Sbjct:   35 KKLEMLKAMDAKVSYVQVADRFSCSVRFLATVRSDRKAIEAAAA--AGNGCQKNARKGDFPEVDKISLDLLEKARQAKIPVTRDVFRSFGRSARVTLLADPATSEAVRARVEDFKAGEKWAKKFVKRNKIQSVRLHGEAGSVDSAAIKEGMDEIRALCAKYPARFIFNVDKTGLQWKLMPRRT----------------MYFKDRLSAIMCCNADGIAKVDVAIIGRAKEPRCLKNVACPVKNFAQTNA 265          
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Match: A0A6H5K1S6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.540e-54
Identity = 115/256 (44.92%), Postives = 159/256 (62.11%), Query Frame = 1
Query:  190 RRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIGSIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLPLTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRMKSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLPKRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKNPRCFRKAPPPIKYFSQANA 957
            R RLD  +KLE LK+LDQKVS  +I+ RF C    IG+++  R+ +E A A+     S K+AR  DFP+      T+   AR                  R   L D  T+AA ++++E F   ++W +NF+ RN+++SV LHGEAGSVD  AI EG+ EIR  C++Y    IFNVDETG+ +KL+PKRTYLS +E R++ARG+K M  KDR++A MC NA G+ KV M+IIG++K PRCF+    P++     NA
Sbjct:   41 RARLDNNKKLEFLKMLDQKVSHAQIADRFKCSLRFIGTVKAGRQKVETATAAGC--GSQKTARKEDFPEG-----TLRPPAR--------------AAQCRATLLADTATSAAVRERVEDFKAGQRWAKNFVKRNKIQSVRLHGEAGSVDKEAIKEGMGEIRALCEKYPARFIFNVDETGLQWKLMPKRTYLSTSENRKTARGSKSMHLKDRLAAIMCCNADGTAKVDMAIIGRAKEPRCFKNGGSPLQVLLADNA 275          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig632.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNH6_9PHAE8.060e-11355.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD82_9PHAE3.510e-8347.37HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5J7S2_9PHAE1.980e-8047.24HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JQU7_9PHAE5.880e-7947.80HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5LCM9_9PHAE6.260e-7344.77HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KEK9_9PHAE9.190e-6946.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4D9_9PHAE4.870e-6548.98DDE-1 domain-containing protein n=8 Tax=Ectocarpus... [more]
A0A6H5JML3_9PHAE1.240e-5942.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWL9_9PHAE2.280e-5845.38DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K1S6_9PHAE5.540e-5444.92DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig632contigP-littoralis_Contig632:49766..51165 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog6669.EFX68856
PFAMsCENP-B_N,DDE_1,HTH_Tnp_Tc5
Model size957
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.56e-32
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38HJW@33154|Opisthokonta,3BCG5@33208|Metazoa,3CXR0@33213|Bilateria,420II@6656|Arthropoda
DescriptionJerky protein homolog-like
Cds size957
COG categoryBD
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791319.5577679-CDS-P-littoralis_Contig632:49765..501611680791319.5577679-CDS-P-littoralis_Contig632:49765..50161Pylaiella littoralis U1_48CDSP-littoralis_Contig632 49766..50161 +
1680791319.5692413-CDS-P-littoralis_Contig632:50604..511651680791319.5692413-CDS-P-littoralis_Contig632:50604..51165Pylaiella littoralis U1_48CDSP-littoralis_Contig632 50605..51165 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig632.14.1prot_P-littoralis_Contig632.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig632 49766..51165 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig632.14.1

>prot_P-littoralis_Contig632.14.1 ID=prot_P-littoralis_Contig632.14.1|Name=mRNA_P-littoralis_Contig632.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=319bp
CGGRLHGLCGEVEDPDGNDNHRICHTCFSKRSNLSNAAKRKQEQGSLLQQ
GASKKINPGASKPRRRLDLGEKLEVLKLLDQKVSRVEISRRFGCGPTAIG
SIRRERKTLEAAAASSARSTSSKSARGGDFPQVDKMAMTMVEEARKVPLP
LTRTSIESFGVAARKKPLTDETTTAADKKKLESFNVSEKWVRNFISRNRM
KSVVLHGEAGSVDDGAIAEGLTEIRKACQEYELENIFNVDETGIFYKLLP
KRTYLSKAEKRQSARGTKGMKAKDRVSAYMCTNATGSGKVPMSIIGKSKN
PRCFRKAPPPIKYFSQANA
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mRNA from alignment at P-littoralis_Contig632:49766..51165+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig632.14.1 ID=mRNA_P-littoralis_Contig632.14.1|Name=mRNA_P-littoralis_Contig632.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1400bp|location=Sequence derived from alignment at P-littoralis_Contig632:49766..51165+ (Pylaiella littoralis U1_48)
TGTGGTGGCCGCCTACATGGGTTGTGTGGTGAGGTAGAAGACCCAGACGG CAACGATAATCACCGTATTTGTCACACGTGTTTCAGCAAGCGCAGCAACC TCTCAAACGCGGCCAAGCGCAAACAGGAACAAGGCTCTTTACTACAACAA GGCGCGTCGAAGAAGATCAACCCTGGTGCGTCGAAGCCCCGGAGGCGGCT TGATCTTGGTGAGAAACTTGAGGTTCTCAAACTTTTGGACCAGAAGGTGT CGCGCGTTGAGATCTCGCGCCGATTTGGTTGTGGCCCCACCGCAATAGGA TCGATTCGGAGGGAGAGGAAGACCCTGGAAGCAGCCGCAGCATCTTCTGC ACGTAGTACATCCTCTAAGAGCGCGCGAGGAGGGGACTTTCCCCAGGTGT GTGTTGCATGTTTATTTTTTTGTTCTTCTCACTTGCTTTCTTCGGCCTGA TCCGTATCTCCATGTAACTGCTGTAATAATTTTATAATTTTGAAATTGAA ATGTGTACTGCAGTAGCATTGCTGTTGTCCTGATATCTCCTTCTTTATAA TTTTGAATTTGAAATGAACTCATCAAGCACAGCGCAGCAGTACTATCTGT AATATACTTGTACAAGTTGCTTTTTTTTACAGCAGCAATCATGATTTAAA TGTTTCAGAGTACTGTAATATTAATATTATTACTGTAACTGAATGATGCC GTGTACTCTGCACAGTACTGTTGTAGCTGATGATGCCTTCAGGCCTTTCC ACCGCACCAGATATTTTACAAAAAGTATCAGAAAGTGGTATGAAGCTCTC AATAAACTTCAGTTCCACTCTCGTGCTCCTTTCAAGCAGGTGGATAAGAT GGCCATGACGATGGTAGAGGAAGCCAGGAAGGTGCCGCTGCCGCTTACGC GTACATCGATCGAGTCGTTTGGGGTCGCCGCCAGGAAGAAGCCGTTGACC GATGAAACTACCACTGCGGCCGACAAGAAGAAGCTAGAGTCCTTCAACGT CAGTGAAAAGTGGGTGAGGAACTTCATTTCGCGCAACCGGATGAAGAGCG TCGTGCTGCATGGCGAGGCTGGAAGTGTCGATGACGGGGCCATCGCGGAA GGCCTGACGGAGATCCGCAAGGCATGCCAAGAGTACGAGTTGGAGAACAT CTTCAACGTCGACGAGACAGGCATCTTCTACAAGTTGTTGCCGAAACGCA CCTATCTGTCGAAGGCAGAGAAGCGCCAGTCGGCGAGGGGCACAAAAGGG ATGAAAGCGAAAGATCGTGTTTCAGCGTACATGTGTACGAACGCGACGGG GTCTGGCAAGGTCCCGATGTCCATCATCGGGAAATCGAAGAACCCGCGAT GCTTCCGTAAAGCTCCTCCGCCCATCAAGTACTTCTCTCAAGCCAACGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig632:49766..51165+

>mRNA_P-littoralis_Contig632.14.1 ID=mRNA_P-littoralis_Contig632.14.1|Name=mRNA_P-littoralis_Contig632.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=957bp|location=Sequence derived from alignment at P-littoralis_Contig632:49766..51165+ (Pylaiella littoralis U1_48)
TGTGGTGGCCGCCTACATGGGTTGTGTGGTGAGGTAGAAGACCCAGACGG
CAACGATAATCACCGTATTTGTCACACGTGTTTCAGCAAGCGCAGCAACC
TCTCAAACGCGGCCAAGCGCAAACAGGAACAAGGCTCTTTACTACAACAA
GGCGCGTCGAAGAAGATCAACCCTGGTGCGTCGAAGCCCCGGAGGCGGCT
TGATCTTGGTGAGAAACTTGAGGTTCTCAAACTTTTGGACCAGAAGGTGT
CGCGCGTTGAGATCTCGCGCCGATTTGGTTGTGGCCCCACCGCAATAGGA
TCGATTCGGAGGGAGAGGAAGACCCTGGAAGCAGCCGCAGCATCTTCTGC
ACGTAGTACATCCTCTAAGAGCGCGCGAGGAGGGGACTTTCCCCAGGTGG
ATAAGATGGCCATGACGATGGTAGAGGAAGCCAGGAAGGTGCCGCTGCCG
CTTACGCGTACATCGATCGAGTCGTTTGGGGTCGCCGCCAGGAAGAAGCC
GTTGACCGATGAAACTACCACTGCGGCCGACAAGAAGAAGCTAGAGTCCT
TCAACGTCAGTGAAAAGTGGGTGAGGAACTTCATTTCGCGCAACCGGATG
AAGAGCGTCGTGCTGCATGGCGAGGCTGGAAGTGTCGATGACGGGGCCAT
CGCGGAAGGCCTGACGGAGATCCGCAAGGCATGCCAAGAGTACGAGTTGG
AGAACATCTTCAACGTCGACGAGACAGGCATCTTCTACAAGTTGTTGCCG
AAACGCACCTATCTGTCGAAGGCAGAGAAGCGCCAGTCGGCGAGGGGCAC
AAAAGGGATGAAAGCGAAAGATCGTGTTTCAGCGTACATGTGTACGAACG
CGACGGGGTCTGGCAAGGTCCCGATGTCCATCATCGGGAAATCGAAGAAC
CCGCGATGCTTCCGTAAAGCTCCTCCGCCCATCAAGTACTTCTCTCAAGC
CAACGCG
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