mRNA_P-littoralis_Contig632.9.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig632.9.2
Unique NamemRNA_P-littoralis_Contig632.9.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 721 bits (1861), Expect = 1.240e-236
Identity = 390/534 (73.03%), Postives = 435/534 (81.46%), Query Frame = 2
Query: 1244 TATNSTAGLTTEART-ELAVGEISAEEDADLPADGPTTASRESAASSIAAGRR-TPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAK------IGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDG 2821
            TATNSTA ++TE RT EL+    S +E AD   D P                  T   +  GQA + AA++LAH+CQIPGVSEA TVVS+L+ LV++S+D +SR D  ++RCRSIVMMLERAAKVLG GGDTN EVER L+E+VHDAV DLV+LIK Y++KNK+SKVL STLFKRR +ELDAVVD+AIL LHLGLQVQVG +V EGL LHK STA+A+AE+LA AR ARRQRKL+QVEIP+DHV +T+E+LG+GGFGEVYLADYNGHNAAAKVQ+  HGFGR  +DD L+G + GQPDA REK  RKAFLRELDAMIRLR PHTVNVYGAITSLPDRLILV+ELL GGDLR MLK SEQPLPEEQSRQII DICAGM FLHSK TVHGDLKSANILLDARGRAK      IGDFGTSRWTQNTERSTGLA YTT PG STHISFAWTAPEVLE   TS ASDVYS+G+VVWEVLSR+ PWADQA PRDIYLRVVI G+RP IP DAP DIAE+LLGCWAQ P ERPTFQAL  G
Sbjct:  514 TATNSTAEVSTEERTAELSRLGFSVDEGAD---DAPXXXXXXXXXXXXXXXXXXTSSGVEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGR--RDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPAIPADAPVDIAEILLGCWAQEPTERPTFQALSGG 1042          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 682 bits (1760), Expect = 3.040e-220
Identity = 353/467 (75.59%), Postives = 391/467 (83.73%), Query Frame = 2
Query: 1421 GQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDG 2821
            GQA + AA++LAH+CQIPGVSEA TVVS+L+ LV++S+D +SR D  ++RCRSIVMMLERAAKVLGKGGDTN EVER L+E+VHDAV DLV+LIK Y++KNK+SKVL STLFKRR +ELDAVVD+AIL LHLGLQVQVG +V EGL LHK STA+A+AE+LA AR ARRQRKL+QVEIP+DHV +T+E+LG+GGFGEVYLADYNGHNAAAKV                            +K  RKAFLRELDAMIRLR PHTVNVYGAITSLPDRLILV+ELL GGDLR MLK SEQPLPEEQSRQII DICAGM FLHSK TVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLA YTT PG STHISFAWTAPEVLE   TS ASDVYS+G+VVWEVLSR+ PWADQA PRDIYLRVVI G+RP +P DAP DIA+MLLGCWAQ P ERPTFQAL  G
Sbjct:  715 GQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVG---------------------------KKIQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQALSGG 1154          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 647 bits (1670), Expect = 8.730e-208
Identity = 396/706 (56.09%), Postives = 463/706 (65.58%), Query Frame = 2
Query:  833 KKKDVNPPAPHPDSSAGDLEHGR--EHRQ---EWDGKSPTSIGVAGGNGVSDPSSQQRGPPPP---------YSDTYSRNALPTPNQHAAAVVAAETN-NDDCGRAQSLSTAPLAGAAMS--------RTDQTAYQGKGIGRAPAGRGTGDW--------SSAQQLLL--TATNSTAGLTTEART-ELAVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLARARS------------ARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQAL 2812
            K  D +PPAP P +    LEHGR  +HRQ   +    SP   G AGGN    P                   + + + R A P        V+AAET   +D    QSL  AP  G   +        RT      G G   A AG G GD         + A+Q LL  T TNST  ++TE RT E+A    S +E AD P      A R          R+TP  +G GQA + AA++LAH+CQIPG+SEA T VS+LI LV +++D  S   A ++RCRSIVMMLERAAKVLGKGGDT+ E ERVL+E+VHDAV DLVELI +Y++K+K+ KVLTSTLFKRR DEL+AV+DRAI  LHLGLQVQVGH+V    +L K STA+A+A+                   +RRQRKL+Q+EIPE+HV++T E+LGKGGFG VYLADYNGHNAAAK                              K+ RKAFLRELDAM+RLR+PHTVNVYGAITSLPDRL+LVMELL GGDLR MLK SEQPLPE++ RQII D+CAGM FLHSK TVHGDLKSAN+LLD RGRAKIGDFGTSRW QNTERSTGLA YTT PG S HISFAWTAPEVLE+  TS ASDVYS+GMV WEVL+R+TPWADQA PRDIYLRVV+R ERP IP DAP DIAEM+  CWAQ P++RPTF  L
Sbjct:  430 KSTDPDPPAP-PSNGLDSLEHGRGEQHRQRQQDLHSSSPIIAGSAGGNVTRCPXXXXXXXXQXXXXXXXSYAHDNAHRRGAWPASASQQHVVIAAETTLGEDGTTIQSLFPAPPVGTLPNPSSKGKPKRTRDNNESGGGTRTADAGEGGGDAVEDGDGCVAVAEQSLLPLTTTNSTNDVSTEERTAEVAGFGFSVDEGADDPPSAAAPAGR----------RQTPSGVGYGQAVLAAAEELAHHCQIPGISEAATAVSILIHLVVDTEDLTS--SAGVKRCRSIVMMLERAAKVLGKGGDTSTEEERVLMEEVHDAVSDLVELITSYQNKSKLGKVLTSTLFKRRQDELNAVIDRAIWGLHLGLQVQVGHDVA---HLVKRSTAEAQAQAXXXXXXXXXXXXXXXTLRSRRQRKLDQIEIPEEHVSITTEVLGKGGFGVVYLADYNGHNAAAK------------------------------KAERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSAHISFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYLRVVMREERPAIPADAPVDIAEMVRSCWAQEPEDRPTFPGL 1089          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 7.080e-202
Identity = 372/649 (57.32%), Postives = 457/649 (70.42%), Query Frame = 2
Query:  887 LEHGREHRQEWDGKSPTSIGVAGGNGVSDPSSQQRGPPPPYSDTYSRNALPTPNQHAAAVVAAETNNDDCGRAQSLSTAPLAGAAMSRTDQTAYQGKGIGRAPAGRGTGDWSSAQQLLLTATNSTAGLTTEARTELAVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDA-QREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDGVMS 2830
            LEHGRE+ ++  G  P +  V                   YSD    N  P P++    V A        G+A S       G+  S T+Q+    +G G    G GT D   AQQ L TA  STA ++T  R ELA   IS E      AD P  AS E  ASS A  R +  D+G GQA MVAAQ+LAH CQ+PGVSEAVT+VS+L+ LV +S+DD S  D+RLR+CRSIVM+L RA KV G G +T G+V R L++DVH+A+ DLVELIK Y+SKNK+SKVL STLFKRR DELDAVVDRAI+RL LGLQVQVG +VK G+ L+K S A+ ++E+LA ARS RR+RKL+QVEIPE+HVT+T+E+LG+GGFGEVYLADYNG NAAAKV       G LS++DAL+    G+ +  +RE S R+AFLRELDAMIRLRSPHTVNVYGA+TSLPDR++LVMELL GGDLR +L+  +QPLPEEQSR+IIGDICAGM FLHSK TVHGDLKSAN+LLD  GRAKIGDFGTSRW+Q+T  STGLA YTT+    T +S AW+APEVLE+ G++ ASDVYS+G+VVWEV+S + PWA+++ PR+I L  V+ G RP   D AP D+ E+   CW   P  R TF A+M+G+MS
Sbjct:  342 LEHGREYNRQQ-GVEPAASAVV------------------YSDN---NQPPHPHKPVEVVTA--------GKAPS-------GSVSSSTEQSTRMPEGPGVRFPGVGTKDVL-AQQSLTTA-GSTAVVSTSERAELAG--ISTENTGRF-ADEPMPASGEREASSTAGRRGSFGDVGVGQAVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAGNGENTTGKVARTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQVGQDVKAGMDLYKGSIAEVQSESLADARSTRRRRKLDQVEIPEEHVTITNEVLGRGGFGEVYLADYNGRNAAAKVLLIARDLGTLSENDALESPLAGRSNTTKREDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTN-STGLATYTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREI-LSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMS 946          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 625 bits (1613), Expect = 2.090e-201
Identity = 365/614 (59.45%), Postives = 428/614 (69.71%), Query Frame = 2
Query: 1037 PTPNQHAAAVVAAETNNDDCGRAQSLSTAPLAGAAMSRTDQTAYQGKGIGRAPAGRGTGDWSSA------------------QQLL-LTATNSTAGLTTEART-ELAVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAE--AETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQAL 2812
            P  +Q  AAVVA  T  +DC   QSL  AP  GA     +    + +   ++  G    D                      Q LL LT TNSTA ++TE RT E+A    SAE   D     P+ A+   AA+     RRT C IG GQA + AA++L HNCQIPGV EA T VS+LI+LV +S+D  S     ++RCRSIV ML+RAAKV+G GGDT+ E  RVL+E+VH AV DLVELIK YE+K+K++++LTSTLFKRR DEL+AV+DRAI  LHLGLQVQVGH+V    +L K STA+A+  AE++A AR  RR+RKL+Q EIPEDHV++T+E+LGKGGFG VYLADYNGHNAAAK                              K+ RKAFLREL+AMIRLR+PHTVNVYGAITS P+RL+LVMELL GGDLR MLK SEQPLPE++ RQII D+CAGM FLHSK TVHGDLKSAN+LLD RGRAKIGDFGTSRW QNTERSTGLA YTT PG STHIS AWTAPEVLE   TS ASDVYS+GMV WEVL+R+TPWADQ  PRDI+LRVV+R ERP IP DAP DIAEM+  CWAQ P +RPTF  L
Sbjct:  352 PAASQQHAAVVAETTFGEDCTPIQSLFPAPPVGALPKSEENPRRRTRDKNKSGGGTRAADXXXXXXXXXXXXXXXXXXXXXEQSLLSLTTTNSTADMSTEERTAEVAGLRFSAEGKGD---SAPSAAAPSPAAAPAGGRRRTSCGIGYGQAVLAAAEELVHNCQIPGVCEAATAVSILIRLVLDSRDLTS--SPGVKRCRSIVTMLQRAAKVVGTGGDTSTEEGRVLMEEVHGAVSDLVELIKTYENKSKLAQMLTSTLFKRRQDELNAVLDRAIWGLHLGLQVQVGHDVA---HLVKRSTAEAQDQAESVAEARRLRRRRKLDQNEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK------------------------------KAERKAFLRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFLRVVMREERPAIPADAPVDIAEMVRSCWAQEPLDRPTFPVL 927          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D7FLN5_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI)

HSP 1 Score: 610 bits (1572), Expect = 5.200e-201
Identity = 345/542 (63.65%), Postives = 397/542 (73.25%), Query Frame = 2
Query: 1115 STAPLAGAAM---SRTDQTAYQGKGIGRAPAGRGTGDWSSAQQLLLTATNSTAGLTTEARTELAVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNV---KEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPV 2722
            STAP A   +   SR       GK   RAPAG G       +Q  L ATNSTA ++T  R +LA   I  E D  +P DG        A S + A R +   +G GQA M AAQ+LA +CQIPGVSEA T VS+L++LVS+S+D   R DA ++RCRSIVMMLE AAKVLGKGGDTNGE  + L+EDVHDAVCDLVELIK Y+SKN++S VL STLFKRR DELDAVVDRAILRLHLGLQVQVGH+V   KE  + HK S  +A +E LA ARSARRQR+L+Q+ IPEDHV +TDE+LGKGGFGEV++ADYNG NAAAKVQH  HGFGRL +DD L+GA KG+    + +  RKAFL ELDAM+RLRSPHTVNVYGAITSL +R +LVMELL GGDLR+MLK +E PLPE Q RQIIGDICAGM FLH                      KIGDFGTSRW QNTE STGLA YTTK G  THISFAWTAPEVL+T   SNASDVYS+G+VVWE+L+R+ PWA+QALP DIYLRVVIRGERP+
Sbjct:   11 STAPAAVGTVVQSSRAKTEPRSGKDNDRAPAGGGAEVGLPTEQSPLHATNSTANVSTGERNDLAGTAIPPENDP-VPGDG-------GAPSMVGARRTSDGGVGYGQAVMAAAQELAQHCQIPGVSEAATAVSILVRLVSDSRDYAVRGDAGVKRCRSIVMMLELAAKVLGKGGDTNGEAAQALMEDVHDAVCDLVELIKTYQSKNRLSNVLMSTLFKRRQDELDAVVDRAILRLHLGLQVQVGHDVSEAKEVTHRHKGSMEEAMSEPLAEARSARRQRRLDQLAIPEDHVLITDEVLGKGGFGEVFIADYNGRNAAAKVQHVAHGFGRLGEDDLLNGASKGESHTLQLQKQRKAFLHELDAMVRLRSPHTVNVYGAITSLLNRPVLVMELLAGGDLRSMLKRAEPPLPEAQCRQIIGDICAGMAFLH---------------------CKIGDFGTSRWAQNTENSTGLATYTTKTGHGTHISFAWTAPEVLKTKAVSNASDVYSFGVVVWEILTRQIPWAEQALPTDIYLRVVIRGERPI 523          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D7FLJ2_ECTSI (TKL family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI)

HSP 1 Score: 622 bits (1603), Expect = 3.190e-197
Identity = 325/472 (68.86%), Postives = 377/472 (79.87%), Query Frame = 2
Query: 1397 RTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQAL 2812
            RT   +  GQA +VAA++LAH+CQIPGVSEA T VS+L+ LV +S+D  S     ++RCRSIVMMLERAAKVLG+GGDT+ E ERVL+E+VHDAV DL ELIK Y++K+K++++LTSTLFKRR DEL+AV+DRAI  LHLGLQVQVGH+V    +L K STA+A+AE+LA AR +RRQRKL+Q+EIPEDHV++T+E+LGKGGFG VYLADYNGHNAAAK                              K+ RKAFLRELDAMIRLRSPHTVNVYGAITSLPD L++VMELL GGDLR MLK SEQPLPE+  RQII D+CAGMTFLHSK TVHGDLKSAN+LLD RGRAKIGDFGTSRW QNT+RSTGLA YTT PG S HISFAWTAPEVLE+  TS ASDVYS+GMV WEVL+R+TPWADQA PRDIYLRVV+R ERP IP + P DI EM+  CWAQ P++RPTF  L
Sbjct:  709 RTSSGVAYGQAVLVAAEELAHHCQIPGVSEAATAVSILVHLVLDSRDLTS--GTGVKRCRSIVMMLERAAKVLGQGGDTSTEEERVLMEEVHDAVSDLNELIKTYQNKSKLAQLLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHDVA---HLVKRSTAEAQAESLAEARRSRRQRKLDQIEIPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK------------------------------KAERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAMLKNSEQPLPEDMCRQIIQDVCAGMTFLHSKSTVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTDRSTGLATYTTNPGPSAHISFAWTAPEVLESQETSKASDVYSFGMVAWEVLTRRTPWADQARPRDIYLRVVMREERPAIPANTPVDITEMVRSCWAQEPEDRPTFTVL 1145          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D7G7X9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 9.900e-178
Identity = 356/629 (56.60%), Postives = 416/629 (66.14%), Query Frame = 2
Query: 1070 AAETNNDDCGRAQSLSTAPLAGAA--------MSRTDQTAYQGKGIGRAPAGRGTGDWS---------SAQQLL-LTATNSTAGLTTEART-ELAVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVE----------RVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEAETLAR----------ARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDGVMSDRR 2839
            A +T   D    QSLSTAP  GA            T   +  G G   A AGRG GD +         S Q LL LT  NS A ++TE  T E+A   +SA+      ADG  +A+             T   +GCGQA + AA++LAH+CQIPG+SEA T VS+LI+LV +S+D  S     ++RCRSIV+MLERA+KVLG   D    VE          RVL+E+VHDAV DLVELIK Y++K+K+ KVLTSTLFKRR  EL+AV+DRAI  LHLGLQVQVGH+V    +L K STA+A+ E+LA+          AR +RRQRKL+Q+EIPEDHV++TDE+LGKGGFG VYLADYNGHNAAAK                              K+ RKAFLRELDAMIRLRSPH VN+YGAITSLPDRLILVMELL GGDLR MLK SEQPLP+++ RQII D+C GM FLH K TVHGDLKSAN+LLD RGRAKIGDFGTSRW    ERS       T PG STHISFAWTAPEVLET  TS A DVYS+GMV WEVL+R+TPW DQA PRDIYL VV+R ERP IP  AP DIAEM+  CWAQ P++RPTF  L +   + RR
Sbjct:  794 AEKTFGGDDTPVQSLSTAPAMGALPKPSSEGKSKSTRDNSESGGGARTADAGRGGGDAAEDGSGCVAASTQSLLSLTTRNSAAEVSTEEGTAEVAEFGLSAD------ADGAPSAAALXXXXXXXXXXXTSSGVGCGQAVLAAAEKLAHSCQIPGISEAATAVSILIRLVLDSRDLTS--SPGVKRCRSIVVMLERASKVLGNVNDLTRVVEMGTCLCHRYPRVLMEEVHDAVSDLVELIKTYQNKSKVGKVLTSTLFKRRQGELNAVIDRAIWGLHLGLQVQVGHDVA---HLVKRSTAEAQTESLAQVRAXXXXXXEARRSRRQRKLDQIEIPEDHVSITDEMLGKGGFGVVYLADYNGHNAAAK------------------------------KAERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAMLKNSEQPLPKDKCRQIIQDVCVGMAFLHGKATVHGDLKSANVLLDDRGRAKIGDFGTSRWA---ERSAETVTNNTNPGPSTHISFAWTAPEVLETKETSKAGDVYSFGMVAWEVLTRQTPW-DQARPRDIYLGVVMREERPAIPAGAPVDIAEMVRKCWAQEPKDRPTFPVLCNRGNAHRR 1377          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 2.270e-174
Identity = 318/539 (59.00%), Postives = 396/539 (73.47%), Query Frame = 2
Query: 1241 LTATNSTAGLTTEARTELAV---GEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNV---KEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTV-TDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLS-QDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDGVMSD 2833
            LTAT ST  ++T  R EL      + SA   A +  +       E  ASS    R +   IG  +A M AA+ LA++CQIPGVSEA +VVS L+ LVS+S+D  S  D+ LR+CRSIV +LERA+KV G+GG+T    +R L+++VH A+ DLVELIK Y+S N++SKVL ST FK R ++L+A +DRA+ RL  GLQVQVG +V   KEG+ + + S  +A A +LA+ARSARRQRKL+QVEIPED V + +DELLGKGGFGEV+LA+YN  NAAAKV H  H  G+   Q+D L+    GQ + +REKS RKAFLREL+AMIRLRSPHTV VYGAITS PDRL+LVMELL GGDLR +LK S+QPLPEEQ R+IIGDICAGM FLHSK TVHGDLKSAN+LLD  GRAKIGDFGTSRW+ +T  STGLA YT K G +T +S AW+APEVL  +G++ ASDVYS+G+V WEVLSR+ PWA    PR++Y+RVV+   RP IP DAPADIA ++  CWA  P+ RPT  A+M+ + S+
Sbjct:  670 LTATVSTVDMSTAERAELGQFDEKQQSAASVASVDGESAPEVLGEGIASSATGRRGSRGGIGLREAVMQAAENLAYHCQIPGVSEAASVVSTLVMLVSDSRDIKSGGDSNLRQCRSIVRILERASKVAGRGGETTTAEQRDLIDEVHYAIEDLVELIKTYQSMNRLSKVLMSTSFKWRQNDLEAAIDRALSRLQFGLQVQVGDDVRGVKEGIDVVQGSIVEANAASLAKARSARRQRKLDQVEIPEDQVMIFSDELLGKGGFGEVFLAEYNRRNAAAKVLHIAHDLGKPGGQEDLLEARVDGQSNPEREKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTN-STGLATYT-KAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIESN 1206          
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 3.100e-172
Identity = 297/477 (62.26%), Postives = 366/477 (76.73%), Query Frame = 2
Query: 1412 IGCGQAAMVAAQQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMMLERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLTSTLFKRRLDELDAVVDRAILRLHLGLQVQVGHNV---KEGLYLHKTSTAKAEAETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNAAAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRLRSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQIIGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAAYTT-KPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLSRKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQERPTFQALMDGVMS 2830
            +G GQA ++ AQ+LAH+CQ+PGVSE  T+VS+L+ LV++S D+    D RLR+CRSI+++L RA KV G G +T GEV R+L+EDVH+A+ DLVELIK Y+SKNK+SKVL STLFKRR DELDAVVDRA++RL LGL +QVG +V   K G+  +K S A+A++E+LA AR  RRQRKL+QVEIPE H+T+T+E+LGKGGFGEVYLADYNG NAAAK                       Q D+QR     +AFLRELDAMIRLRSPHTVNVYGA+TS PD ++LVMELL GGDLR +L+TSEQPLP+EQSR+IIGDICAGM FLH K TVHGDLKSAN+LLD  GRAKIGDFGTSRW+Q+T  STGLA YTT KP  ST +S AW+APEVLE+ G++ ASDVYS+G+VVWEV+S + PWA++  PR+I L  V+ G RP    DAPADI E+   CW   P+ R TF A+++G+ S
Sbjct:  638 VGGGQAVLLLAQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAGNGENTTGEVTRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAIKTGMDQYKGSIAEAQSESLADARRTRRQRKLDQVEIPEGHLTITNEVLGKGGFGEVYLADYNGRNAAAKHH---------------------QNDSQR-----RAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTH-STGLATYTTTKP--STQMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREI-LSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDS 1084          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig632.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA37_9PHAE1.240e-23673.03Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FN19_ECTSI3.040e-22075.59Putative CTR1-like protein kinase/ leucine rich re... [more]
D8LH32_ECTSI8.730e-20856.09Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca... [more]
D8LRE9_ECTSI7.080e-20257.32Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
D7FRQ5_ECTSI2.090e-20159.45Similar to CG1848-PA, isoform A/ leucine rich repe... [more]
D7FLN5_ECTSI5.200e-20163.65Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
D7FLJ2_ECTSI3.190e-19768.86TKL family protein kinase protein kinase/ putative... [more]
D7G7X9_ECTSI9.900e-17856.60Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KY76_9PHAE2.270e-17459.00Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LHV1_ECTSI3.100e-17262.26Protein kinase domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig632contigP-littoralis_Contig632:18327..35023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRF5
Preferred nameRIPK4
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,Pkinase,Pkinase_Tyr
Model size4299
Max annot lvl2759|Eukaryota
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
Exons10
Evalue4.31e-207
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size2601
COG categoryKLT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig632.9.2prot_P-littoralis_Contig632.9.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig632 25166..33569 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791319.3149457-UTR-P-littoralis_Contig632:18326..184931680791319.3149457-UTR-P-littoralis_Contig632:18326..18493Pylaiella littoralis U1_48UTRP-littoralis_Contig632 18327..18493 +
1680791319.3318565-UTR-P-littoralis_Contig632:25088..251651680791319.3318565-UTR-P-littoralis_Contig632:25088..25165Pylaiella littoralis U1_48UTRP-littoralis_Contig632 25089..25165 +
1680791319.4577777-UTR-P-littoralis_Contig632:33569..350231680791319.4577777-UTR-P-littoralis_Contig632:33569..35023Pylaiella littoralis U1_48UTRP-littoralis_Contig632 33570..35023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791319.3451018-CDS-P-littoralis_Contig632:25165..253781680791319.3451018-CDS-P-littoralis_Contig632:25165..25378Pylaiella littoralis U1_48CDSP-littoralis_Contig632 25166..25378 +
1680791319.3563504-CDS-P-littoralis_Contig632:26062..263421680791319.3563504-CDS-P-littoralis_Contig632:26062..26342Pylaiella littoralis U1_48CDSP-littoralis_Contig632 26063..26342 +
1680791319.3658824-CDS-P-littoralis_Contig632:27014..278981680791319.3658824-CDS-P-littoralis_Contig632:27014..27898Pylaiella littoralis U1_48CDSP-littoralis_Contig632 27015..27898 +
1680791319.3819292-CDS-P-littoralis_Contig632:28318..285101680791319.3819292-CDS-P-littoralis_Contig632:28318..28510Pylaiella littoralis U1_48CDSP-littoralis_Contig632 28319..28510 +
1680791319.3923056-CDS-P-littoralis_Contig632:29138..291951680791319.3923056-CDS-P-littoralis_Contig632:29138..29195Pylaiella littoralis U1_48CDSP-littoralis_Contig632 29139..29195 +
1680791319.4037971-CDS-P-littoralis_Contig632:31127..313101680791319.4037971-CDS-P-littoralis_Contig632:31127..31310Pylaiella littoralis U1_48CDSP-littoralis_Contig632 31128..31310 +
1680791319.4146304-CDS-P-littoralis_Contig632:31508..319041680791319.4146304-CDS-P-littoralis_Contig632:31508..31904Pylaiella littoralis U1_48CDSP-littoralis_Contig632 31509..31904 +
1680791319.4294503-CDS-P-littoralis_Contig632:32335..324551680791319.4294503-CDS-P-littoralis_Contig632:32335..32455Pylaiella littoralis U1_48CDSP-littoralis_Contig632 32336..32455 +
1680791319.439987-CDS-P-littoralis_Contig632:33293..335691680791319.439987-CDS-P-littoralis_Contig632:33293..33569Pylaiella littoralis U1_48CDSP-littoralis_Contig632 33294..33569 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig632.9.2

>prot_P-littoralis_Contig632.9.2 ID=prot_P-littoralis_Contig632.9.2|Name=mRNA_P-littoralis_Contig632.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=867bp
MTNCSDGDSFRVVADINYVYLEYGVFSSPDGCYGALDCQVTGEESEDHFC
TGGEYSTYEYYFRTYTFDDVEVWVFASYYNGTYNPRCRDYYDNDYSTLHP
TEVLYWACENSDGEFTLFPEFVTTCGCSTPAPTTTPELTSAPAATSEPSA
TPTTPVSLASDGSGGATTVVVVVGTLVAGALAVAALVFYLRRRRVAKKKD
VNPPAPHPDSSAGDLEHGREHRQEWDGKSPTSIGVAGGNGVSDPSSQQRG
PPPPYSDTYSRNALPTPNQHAAAVVAAETNNDDCGRAQSLSTAPLAGAAM
SRTDQTAYQGKGIGRAPAGRGTGDWSSAQQLLLTATNSTAGLTTEARTEL
AVGEISAEEDADLPADGPTTASRESAASSIAAGRRTPCDIGCGQAAMVAA
QQLAHNCQIPGVSEAVTVVSMLIQLVSNSKDDVSRVDARLRRCRSIVMML
ERAAKVLGKGGDTNGEVERVLVEDVHDAVCDLVELIKAYESKNKMSKVLT
STLFKRRLDELDAVVDRAILRLHLGLQVQVGHNVKEGLYLHKTSTAKAEA
ETLARARSARRQRKLNQVEIPEDHVTVTDELLGKGGFGEVYLADYNGHNA
AAKVQHFTHGFGRLSQDDALDGARKGQPDAQREKSLRKAFLRELDAMIRL
RSPHTVNVYGAITSLPDRLILVMELLVGGDLRNMLKTSEQPLPEEQSRQI
IGDICAGMTFLHSKGTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTER
STGLAAYTTKPGASTHISFAWTAPEVLETNGTSNASDVYSYGMVVWEVLS
RKTPWADQALPRDIYLRVVIRGERPVIPDDAPADIAEMLLGCWAQAPQER
PTFQALMDGVMSDRRR*
back to top

mRNA from alignment at P-littoralis_Contig632:18327..35023+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig632.9.2 ID=mRNA_P-littoralis_Contig632.9.2|Name=mRNA_P-littoralis_Contig632.9.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=16697bp|location=Sequence derived from alignment at P-littoralis_Contig632:18327..35023+ (Pylaiella littoralis U1_48)
CGACCAGCTAAACGGCGAATAATAGAAAAATAAAAAAGAGGTGTGTGTGC GAGGCATCATGTGATACATACGAAGCATCCAACAAGTAGAGACAGAACGA CAGGGCCCACTCCACCTCACTTCCGAGGGCGCTTTCATACTACCTGCGAA CCGAACGGGGCATTCAGGTGAGACGACTGGAAGAGAGTGTGCGGGGTGCC TCTCCGACCGGATTGCTGCGGAAAGAAGTGCGTTTTTTACGGCTTGTGAC ACTTGTACGCATGTGTGTGTGCGTGTGTGCCGTGTGCTATGCCATCCACT TGTACGCAGAATCTTCGATGGAATGAACCGCTGAGCTGCGACCCCAAATA AATGCGTCATGCTCTGTGTGGGACGCAAATAAAAGGGAGACAGGGAGGGA GGGATTTATTTCCAGGTCGTGATTTCCCAACAGGGTAGATAGGTGGATAG AGCGGAGCAGAGCGAGTCGTCGTGCGTGGTTGTAGGTTGCTGTTGATTCT GACATGGTTCTGAGTATGCATCATGTGAAGCTGTGTTGTTTCACTGTTGC AAACCGTGACGACGAGGATAAAGCTCTGCTTGTTTCAGCAAAGTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTGCTACTGAGGT GGAGACGAAACCGCACCGCTTCGTGATACTGCACCTTTGAGCCTTTGGCG CGTCGCATTGAGCTACTGCCGTAGGCTGTCTGCCGCCTGCGGCGTACGCC GGCTATGACTCGTGCTTTATTTTGACGCTCTATAACAACCACCATCGCTG GTGTCGACCGGTTTAGCGGAGGATGGGCAATCTCCATCGACTCTGAAATC TGTAATAAACATCCACCCGAAAACACACGAAAAGCAAGGACACACGGCGG TGCACTACGACTGCTGTTGTTGTTGTTGTTGATTCTCACATTAGCTCATT ACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATACCGTCCTTGG AGGAAAAAAATAAAAATAAAATAAATGGACTATGATCACCCACATTCAAA TCAGATATGGTACCGTTGGGGTGCCATCTGTAGTGGCCAAAGTTTTGTGT GTGTTGTGTGTTGTCATCCCTTTAATTGGACGCCACTCTACACCTTTCGG GTAGGTAGACGCTCCAACCGGGGTCACACAGGGGGAAGTCAACACAGGAG TTTTTTTTTTTTTTCTCCACTTCCCTCTGCAGTGCTTGCCTTTTTGGTTG AGCTTTTATCGCGAGAAAGGGGACAGCAATCCCTTTCCCTCGTCGATGTA CCAAGCAAAATACAGAAAAAAAATAACAGGTTCGAAGGAAAAAACAGAAA ATTGGAAACAGTACGACAGACAAAAAATAACCAAGACAAACCTCAACCAT AATAACCATATACTTCGAAGTACTTCGTACGTCGAACCAGGGCCCAGGGC CATGACAGACCAAGGCAAACGCAAACCAGGGCGATGGTCCAGTAACCACA TGATCAACAGACGAAAGACAAAAAAAATAAAAAAGAAGATACAGGGAGGG CACAAAGACTGAGGGAGGAGTGCAATCGTACACAAACACAACAAACAGGC CGCCAAACAAAGAGGGAGCAGGGGAACGAAAAGGGAAAAGAAAAAAAAGA GACAAAGAGGAAAAAAATACATACATACATAGAGAGTGCAGAGGGAAGAC CGGAAGTACCGGAAGTCgggggGGGGGGGGGAGGGGGAGGTGATAAAAAA AAAAAAGTAAAAGGCATGCAATCAATCGCAAACATGTCTTGCCACGAGGT CTGCCTGTTCACGCTTGCTCTCCTCAGTCGCATCCATGCCTCCTGCTACT GGCACCACCGTACCCAGTTGTTTCTGCCCCACATATTTGGCAGCAGCTAC ACCACCATTCCGCCCTACAGGTTTTCCACTCCGGCCACTCCGTAGCTTGG CTTTGGGCTGCTTCTTCTTGTGCTGTGCAACTCCAACCCCACTACCCCGC TGCCCTTGTGCCCCCCCGTACTCCTCCTCTCGTTTACCCCCGCCATCCGT TCTCCCTCTTTTGGCCAAGGCCTGCCCCTCAGCCGCGTCCCTCTCCCTTT TCCGTCGACGTGTCTCTGATAAGTCTCCCTCTTTCTTGAGCCACTCATCC GTGAACCGCCGCGCACCCTCGTCGATCCTGTCGTACCACTCGTCAGCTCT CTCTCTTGGCACTTGCCTCCCACCCCTCTTTTTTGTCGACCACGATGTCG AACGCTTCGAGGTCCTCCTGCATTCGCCTCAGCCAGTCAAACTCTTGCCC CCCCAGATACCTCGCTCCCCCCTGCAATTCTCCCACAAAAGCAATTTTCG GGAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTGCGAAGCACAGTCGC CGCTTGCGCACGGTGGCCTCAATGCTCTCGTCGCAACCCGCGGTGATCAG GGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTATCTCCCTCTTTTGTACAC TGGTGTGAAAGCGAACTACTTCGAAGCACATTTTTCGGTGCTACTGCTGT AATTACCTGATATTTACGCCACACCGGGTGTGTGCCCCACCGGTGTGTGT GTGTGTGTGTTGTCACACTACACCTCTCGAATCCCAGTGCGGTAACATCA TCTGGGGCTTTTTCTCACATTGCGCGTGGAAGTGGAAAGCGATCAATTCG TGAGTAAACAAAATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGT CCCCTTTCTCGCGATAAAAGCTCAACCAAAAAGGCAAGCACCGCAGAGGG AAGTGGAGAAAAAGAAAAAAAAAAAACTCCTGTGTTGACTTCCCCCTGTG TGACCCCGGTTGGAGCGTCTACCTACCCGAAAGGTGTAGAGTGGTGTCCA ATTAAAGGGATGACAACACACACACACACACACTTCCCGCTGCTGTACTT GGCTTAATTTTTTATCGCAAGAAAGGGTACAGCCTTCCCTTTCCCTCGTC GACACTTCGAACTGTGTTTACTCACTCACGAATTCATCGCTTTCCACCTT CACGCATGACGACATGGGGAAAAGAAAAAGAAGAAAAAAATGCCTCATCG CTGGTGGGATAAAAAGCCGTACCTACACCACCATTGGGTGGATTCGAGTC GACGGGATGTACAAGTAAGTATGATTCGTGTTCATCAGGTATATAGATAC GTATCCTTGCGTTTTCCGTTGGTTTGTCGCCGCTGCTGGGGCTTCGAGCA ACAAGCTTTTTTAGGTTGGTTCCTTCAGTGCTGTGGACGTTCAACAAGCT GAAATCGCACGAGGAAACGTCTTTACAACATAACCTCTTCTCCTGTACTA TGATGTGTATCGGGGTTGAGAAGCAGTGTGCGTTGGATGGCCGCTTCTCA AATAATTGCGCTAAGCCCTGTGCGTTGCTGTTTGGTGGCGTATGATGTGC CTGCTTCTTCACAGCAGTGCTGCTGCTGCAAAACACAGCTGGTGGTGATG TGTTCTTGTTGATTCTCACATTTGCTCACTACCGCCGCAGTCTAGCCCGT TATGTGTGCTGGTGTGGGTGTGCGCCAGCACAACGAACACAAAACGCCTC TCATCATTTTTAAAAAAAAAGGGACCCCAACAATAACGCGCCTCCGCCAA GATAGCTGTGCGCACAGGACATGGACTGCGATGACCCCAGCAGCAATGGG TAGGTGCTATTTACCTCACCAGTTCAAGCCCTCGGTCGTAATGATCTGTG CTGAACTGGTGCCAAAGTGTTGCAAAATGTGGCCATTATCTCGGACACGC ACAGACGCTCAGACAGACACCAGAACCTCGAAATTAATTAAAGGCACCCC TGTCTCCGATTTTTTTTTTTTATTCGCACATACACACTCACTCACAGATA TACATCACGACAAGTCGGTATGGATTGGAAGCAGTTCGACACCGAAGTCA CACTTCGCTGCGCTCGTGGACTGCTTCTCAATATCACACAACAGACAGGT GTATGTATGTGTTTCGTGGCGTGTTAAACACAATGAACAAATATCAAGGA CAGGACGCGATTTTTCACAAAGATATTTGTAACGTGTGTCGCACAAGACG ACCACCAAAAATCTCATCACCGCAGGTGAATGAAAGTAAAGTTTGACATG CTTTTAGTTGAGTTCCAACTAATATATTGATGTGTTTGGAGGGATGTTTG GTTGTTTGGTTGGTTTTGGGTTTGTTACTGAATTTGTATGGATTAATAGT TTTTGGTTTCAGGACCCCTGCCAAAGGTAATAAACAGTGACAAGAGGGAG GAATTAAATTAATGACTCGGGACGGGATGACATGGGTGTGTGTGTTTGTG TGTGTTATCATCCCTTTAATTGGACGCCACTCTACACCTTTCGGGTAGTA GGTAGACGCTCCAAGCAGGGTCATACAGGGGGAAGTCGACATGGGTGTAG GCAACAAAATGAACAGATAAAAGATATCGTTCGTACGGGAGTAAAATTGA TGAGTTCGAATAGGGCTGACACAACAACAAGTTTAGGCAAAGAAATATTG GCTGGTCTTTTATGTCAGGACGTCTCACCTGTCAACGGTAATAAAGCAAC ACCAACCTAGCGATCCTTTCGAGCAACACCAACCTGGCAAATCCTCCGAG TAACACCAACCTACTTGGCGATTCCATCGAGCAACACCAACCTAGCAAAC TACTTTGCTCACCATCCAAAAAACTGCTGTGCTGTATGGGTTTGGGGTTG GGGTTAACGTTAGCTTTACTGTAGAGCCAAAGGATTTTCACGCCCTCTCC TGCCCCCCTGCCACACCTTCAAAATAACAGAGTCAAAAATCGATACCTGC CACATTCACCTACTGTATAACGACACCAAGCTATGTAGACAACAAACGGC CGATTCCTCCCGTTGTGAGACACAAAAACAATGTATCATATGATGGGTGC ATTTGTTGCCTACGCCCCCCTGGGTGGATCGAAGATTTACGTAGTCAGTG CTGCATGGTCTGGGGCGGCTGAATTTGAACCACAAACATTACCAAGCACC TACTTCTGTTCGGCGGCGCATTTTGCGTATACCGTTGGGGTTTATGACTC ACTGTAAATAGTATTGGGGTGAACGCTCCGAAGCAGAGTAGGCCAGCAAG TGATTTACACCAATGAATACACAGGTGGCCAAACCGACACCTTACGAGAC GTTGGGGGCATCCACAACCTTAGGAGACGGTGGAGATGGTTGGTGAGAGC GATGTCAGCCTCAAATAGTGATTGTCGTGCTTCGTGCACAAGCACAATTG CAACAAACCGGCGATCAGAGGGTCATTTGTGCAAGCTCCGTACAACATGG ATTTTAATTTCGTTTTTAAAAATAATACAAGCCGAATCGAAAAAACATTG CGAATCATGTTGGACGGAGCTTGCACAAATGACCTTCTGATCGCCGGTTT GTTGCAACTTTGCTTGTGCACGAAGCACGACATCCATTATTTGACGTTGA CCTCGCTCTCCCAACCATCTCCACAATCTCTTCAGGTTGTGGATGCCCCC CAACGTTTCGTAAGGTATCGGTTCGGCCACCTGTGAAGTATGTATGGAGC CGCTCCGGAAGCAGGCAATGTGCCAATCGCCGCTGTTTGTGGCGCTGGGC GGTCCGCTCTTCACCATGAGTACTTATTTCACGAGGCGCAAAGCATGCCA TATTACTCTCCCCCCACAAGCTCTCACGAAGTCAAATACACACACCAAAT ACTGCCGACGAAAAGCGCGTGTTGTCTTCGCGCGTACTCGCTTCGGATAC AGTAAATACTTGTACGTGTTCGGCAGCCAGATTTCGCACTTGCTTTTTTG TCGAGAGATCCTAATCCGCACTATAGATTTGTCCTAGAGTTTCGAATCCC TCGCACCATATTGTGCTGAAATTCGGACAGAAAGAAATGGCCGATGCCGC CGTGCTGGGTGGCGCCAAGAGATATCGGATGTGGTCTGCGTCTTCAAGGC AGCCTGCATTAAACTTGCCTGTACGTACTACAAAGCCCAAAAATATTCTC CCGCTGTGATACAGTATATTCAAGCGACTGAAAGCAACTTTTCTTGCTAC TACACTCAAGAAAATGTGGCGAGGTGCTGATATTGTCAGGAAAACGTCAT TTATTGGCGGTCGACTACGGGCAGCTGCATATATTTTGTATACTATACTA GTTGTGTAGCGAGGTCACGTCCTCTTCCAAAAGAGGGAAATGGTTGTTTT GTCCTACAGTACCGGCCTGCTAATAAGAAACCAGTAAATCTGGCTCAGGC TGACTTCTTATGTTGGGTTGAAAGTCGAGCATGACACTTTCTTATGTATT GTATAGGATTGAGTGTAGCACTCGCCGCCCAGGCTGGGCACTTTCTTAAT TTTCTGAAAATCTCAGGCTGACTTTCTTCAAAGGAGCTTTCTTATTAGCG GGCCGGTACTGTACTCATGTACTGTACTGGTGAGCAAGATGCCGTTTGTT ATCTCGTCCTAGACGCTTCCGGCCAGAGACGCTGCCCTTTCAGCGTTCGC TTTGGTATGACTGATCTTCTGCGTAGATGTGCCTTTTCCAGCGAGATAAA CGGTAGGCGGGGGAGGTGTTCGTGTTAAGTCTCTCCGCCCTGATGCAACA TGACAGCGATGCCATTTCATTGAACTTCGAAGCAATACCTATGTGTGAGA GTAAAATTTCCACCCTGGCTCATCATCTTGCCCCCCCCCCCCTCCCGCGT ACAACTATGAAGTGTGCCAAGTGTGTCGGCAAACAACAAGTGGGTGAAGA TTCACATTGTCCCTCGTGACGAACTCGTCTACTTCACACATGACGAACTG CTCGGATGGAGATTCCTTCCGTGTCGTTGCTGACATCAACTACGTGTACC TCGAGTACGGCGTGTTCTCGAGTCCGGACGGTTGCTACGGAGCCCTGGAC TGCCAAGTCACCGGTGAAGAATCTGAGGATCATTTCTGCACGGGCGGCGA ATACTCAACCTACGAGTATTACTTCAGGACATACACATTCGACGATGTTG AAGTGAGTGAGGTGTTGGACATGTACACCCCCACAGGTCGATGCGCAATT CACAGTGATGTTGGATAGATTCCGAGATGCACCTGATAGGCTTGTACCCT GGTTTATAGCCGACTTGAAAATCGGGGGCAAAACGTTACAACAGCGTGGG AGCGATCCTGCCTGCCCCCATAGACTAATGTACGCCCCGTGATAAAACAA TCACAGTTTGAACACGGATTACCTGCCGGTGGATTCAAATCTTGCCATTT CTTGGGTTAGATCTGGTGAGGGTGGCATCTAACATATGGGATGACTCGTC GTTGATGGTGGCGATTTGCCGAGAATATGCACCAGCAGTAGTGTCAATCA ATGGCTAGAGTTGTACTTGAAGTGTTGGACTGCAGCATGAATAGTTATTT CGTCTTCACTTAAACTTGGCTATCATTTCTTTGGTTATTTTTGGACATGT TTCTGGACAGTTTTTTCGGCGTTTGTTGTGGGAACCACATACGCTGTCTC GGTGTCGGCACATTTTATTTCCAGTATTGCGTACTTTCTTCATGCATACG TAGTCGCCGATGTGAACTGCATGCTTCTTGCTTGGGCGTGGTGAACCTTT TGCGTCAAGGCGGTGTGTCAGCTGTTGATCCTTACCTTTGCTTCCGCGGG CGCTCTCAATTTGGGAAACCTTTCACTTGTGTTCAGGTATGGGTATTCGC CAGTTATTATAACGGTACATACAACCCCCGGTGTCGAGACTACTACGACA ACGACTATTCTACGTTGCACCCCACGGAAGTCCTCTATTGGGCTTGCGAA AACAGCGATGGGGAGTTTACACTCTTCCCCGAGTTTGTGACCACTTGCGG CTGCAGCACTCCTGCTCCTACTACCACCCCCGAGCTTACTTCTGCTCCTG CCGCCACCTCCGAGCCATCTGCTACGCCGACCACCCCAGTTTCCCTCGCC TCCGACGGGAGCGGAGGTAAGCACGGGTTGGGGATGGCAAGTGTATATGG AATCGCAATGAAATCGAGGATGTTTTTGCCAACAAGTCTGTTCCGGGAGC CCTTCGACCTTGCTCTCGTGCGCTTGTTTCCCCCCATTTCTGTTTGCTCT TCTTCCTTTTGACACTATATTTCAACTTGAAGCCCTCGTAGTTTCCTTTG TCAAATCTCTTCCTTCCTTTTCACCTTCGTTCCTGGGTTTGACACGATGT GGACACATGTTCTGCGTCTTCATGTCTTACTGTTCATGTTGCATTATCTT ATCTTGAGCCTGTGGCCACGTAAGGAGAGGTGGGACCATAAATGTCGTGG GCAACAGCTAGGTGTTTTCTCGATCAACTCTACGACAAATACCTACCTAT CTCTCCGAGGAGTACATTCAGAGCTAAACCGAAGCAGAGCCGCTCCCTTT GCACCGTCGGGCCTCGGATGATTATTTGAGGAGAAAAGAGGGGCGCTTGC TCTCGGTGCCAAGCAGCATCAAACACGTACTGTCTTGTTCATGCTGTAGG AGATCGCAACGCTAGCCTTCACAACAAAAGTGAACATCTTACTTCGAAGT GTGCTGTCCGGCTGCCATCTCCCCATGTCGTAGTCTATCTGTGGAATCTT CTCACTGCTTTAGCCCACTGCTCTTCTGCAAAAAGCAGGCGCTACAACGG TGGTTGTTGTAGTCGGGACTTTGGTGGCCGGCGCGCTGGCGGTGGCAGCG CTGGTGTTTTACCTGAGGCGCCGACGAGTCGCGAAGAAAAAGGACGTCAA CCCTCCGGCCCCTCATCCCGACAGCAGTGCGGGCGACCTTGAGCATGGCC GTGAGCACCGGCAAGAGTGGGACGGTAAATCCCCTACATCGATCGGTGTC GCCGGAGGCAACGGAGTCAGCGACCCGTCTTCTCAGCAGAGAGGTCCGCC ACCGCCGTATTCGGATACATATTCCCGCAACGCTCTGCCAACCCCCAATC AACACGCGGCGGCAGTGGTAGCGGCAGAGACCAACAATGACGATTGTGGA CGCGCCCAATCGTTGTCTACAGCACCACTTGCTGGCGCTGCTATGTCCAG AACCGATCAAACCGCGTACCAAGGCAAGGGTATTGGAAGGGCGCCTGCCG GCCGGGGAACGGGAGACTGGTCATCAGCCCAGCAATTGTTGTTGACGGCG ACGAACTCTACTGCGGGCTTGACGACGGAGGCGCGCACCGAGCTTGCCGT TGGAGAAATTTCGGCAGAGGAAGATGCCGATCTTCCTGCCGACGGACCAA CGACAGCCTCAAGAGAGAGCGCAGCATCGTCGATAGCCGCCGGCCGAAGG ACGCCCTGCGACATCGGGTGTGGTCAGGCAGCGATGGTGGCGGCACAGCA GCTGGCGCACAATTGCCAGATCCCCGGCGTCAGCGAGGCAGTGACGGTGG TGTCGATGCTGATACAGTTGGTGTCGAACAGTAAGGACGACGTGAGCCGG GTCGACGCCAGGCTTAGGCGGTGCCGGTCGATCGTGATGATGCTTGAGCG GGCGGCGAAGGTGCTTGGCAAGGTGGGCTGCATAGCGCGTGCTTGTGGAT CGTGTTTTGTGTGTCGGTTCCCATGCGCGATTTAAGTCGCGAGGATGATT GGAGACAAGGTTTTTTCTTTGCGTAGACTCGGGCTGAACAAGTTCGCAAA CGTGTTCATCACTACGATGATGAGCTCGGAAAGTGCCTTGTTCCACCTGT CTTCGGTTTTGTTTTGGAGATTTGTGTGAGTCTGTGAAGCTACAAACTTT TTTCACGTAACGTGCAGCACCCGTGCTGGAGAGAGCAGACTCTACACGTC ACAACGGGTACGCTCCATAATTATGCAAAACTGGTACAGTAACCGCATGA TGTGGGAGCACGTTGTGGGAGGCAATATTGCTTTCGTCGTGTTTACATGT ATATACGCTCGATGAATCGTTGCACATTGAAACGGAACCAAGGGTGGCGA TACAAACGGAGAAGTTGAGCGCGTTTTGGTGGAAGATGTGCACGACGCCG TCTGCGATCTCGTCGAGCTCATTAAGGCGTACGAAAGCAAGAACAAGATG TCTAAGGTATTAACGTCGACCCTGTTCAAGCGGCGCCTGGACGAGCTAGA CGCGGTCGTGGACCGAGCCATCTTACGCCTGCACGTGAGTGATGTCAAGC GACTAATTTTGTGCGCGTAATTGGTAGATACGTCACCCGCCCTGTACTGC GTAAGCGCCCGCTGTACAGCAGTATGCATCATGGCTGTCGCATCATGCTT TCCGGATATAAGAAGTGCAGTCAACGTGGGGAACTTCGCTCACGATATAA AGGACGATTCGCCATCTCGAACATGGATCGTGGACCTACCTACTTCGAAA TGATTTACACCTCCGTCGTGTGCCTTTCTCGCGGAAAGTCTAGTCACCTT CTGGACAACTGTAACCTACTCGTTCGTATCTCTATTCGGTGGTGACGCTA TCAGATTGAGCGCTGAGACAGCCCCGACCGTAGGATCAAATGCGCGAAAG ACTGTTCCTTTTGCCCTCTCTAGCTCGCCCTGTAGATGAACTCAAGACCC ACGGTCTGTGCACGTCGGTTATTTTCTTCGAAAACAATGTATTCTGGAAG GGCTCATACTTTTCGCCTTTCAGAAATCATAAATTTTGCTCGACAAAGCG GGTCAAACCGACTTGTTCTGACAAGTAGAACGTTGGTATGGCACGATCGG GTCGTAGCTGATCACGTACGGCCCGCTGTTTCCCCCCACATTGGCTGCTT GGAATCTTCCAGCTGGGCCTGCAGGTGCAAGTGGGACACAATGTCAAGGA AGGGTTGTATCTACACAAGGTGAGCGAGAGCACCTACATTTGTTAGGTAC AATGGATCCCATTAACCCAACAAAATGGTAACGAATCAGTGACGAAGGTC AACACATAGACCAAAGGGCAAGACAAAATCCCAACCCATAATAACAGTTT CTCAAAACACCAACAACAAATCCAAGTCAAAGCTGGGCGGATGAAAAGCA TGAGCATGTCGTCACATGCCTGAGCGGGTCTAGGACCCTAGTTGTAGGCG GCGTGCTGCTGCTGCTGCTTCTGCTGGTTGAACATCGGCTGCTGCTGTGT TGTGGTCTTCTCTTGCATGCTGCTCATGATCCTCTTGATCTCCAAAGTTC CGTCGCCCTCCCTGCGAAATGATTCTCCAACTGGCAAAGCTAGACCCGCA TATCGTGAACGACGTGTCTCCGCTAGAGTAATCGATAATTGGGCTGAGCT TTAGCTCGGTGTTGGGTGGAGATGTGGGTACCTCGGCCACACGGGCCGAG GTAGGAAACGCTCGTTGTATTATTGACCTCGAAGGAAGCACACACCAGAG AAGATGAAGAGTACCAAAGCAGACAACAAACGGAGAGTGACGTGGATGCG GTACATCCATCACGGAATCACTCCGTCTCCAAATCCAATGAACCGAATCT CCACCATGCCAAGATACTCCAGGGAAGTACCCATGAACTTCCCCGAATGT CGCAACCTACCGACTGCAATCTTCGTAGTTATTATATCCAGTATCCATCC ATCATATTATGCTACGAGGACACCTCTCATGTATCCTTCAACGTACAAGT ATCCAAAAAATCCTCCAAGTCCAAAAGCTGTTCCTCATCCCCCACCGTAG GTTTCGCCGTTTGAAAACCACAGGCCACGTGAGCTCTGTTCATAGCCCCC CGCGAGCGCGGGTGTAGCAGAAGTATGGGAAACAACATAGAAGAGTGTAA AGCAGTTGGCAACAGTGCAGAGGGCAACAGCTAAACGTTTGTCTTATCAA AGGACGTTTAACTCTGACGCGTGACAGAGGTCAGAGCAGGTGTAGGAGTG TACACTCCCTCAGGACAACGAGATGTGAGGGAGCTGAAATGTACGTATCA GATACGAAGGATGCCATGGTTGATTTGATGATGTTTACCGGGTATCTTAC ACGGGGAAGAATATTGTTTCGAAGTTGTGTGTGAGATCGGGAAAAGGATG GGACACCGTAGCCGAGTTAGTACAGGAAAGAGATCAGAGGAAACCAAAAA GAGGCATCGGCCAAGAAAACGTTTGGCGGCAGGATAATACAAGGACGATT TGAAGGGTTTGGTACTGGTACCAAAAAGAGAGAACCCAGCATTACGAAAG AAGGTGTGACATGTGAAAAGCATCCGTGCATAAACTTTGGAAAAGTGGAA GGGATGGGCGACGTATCTCCTCAGTCCGACGATTCATGCCATGCCATAAG ATGGAAATTCACCTGCGAGTAGTAAGCATGGACTTGCCAAAAGAAGAAAA GAGGCTGACCAGTAGTCGGAAGGAGACGTCGATAGAACTTACGTTGGTTT GGAACATCAGCTTATGTATGCAGGATGCCCTAGTCGCGGTTAATGGTGGC CACAAGAGGCCAAGCAGGACGGAGATAAGGTGACCAAGACGTGGAGAAAA CGTGAACAGTGCCCAAATGTTGGCTGTGACTCTACTAGGAGTGCGGTAGA AGCGATGCTCCGTGTAGAAAGGGATGCGTGGTCAAAAGTCAAAGGACTAT CACAAATAAAACAAAAATTGGGCACGTTTCCCGCCCCCGCCCCCCTAGAA CGGGGTAGGGTCATGCGCAAGGCCCTCTCTGCCCCTTCCGCTTCGCCGAA CTGTTTCACCAGTGTGGTCAAGGGGAGTGCAATCTCGTGTAATGTTGAAG TTTCTCCGACCACATTTCCGTTGGTGACTGAACGTTCGATTTGTATGACA GACGTCTACGGCGAAGGCCGAAGCGGAAACTCTGGCGAGAGCCCGTAGCG CGAGGCGGCAGCGCAAGCTAAACCAGGTTGAAATCCCGGAGGACCACGTG ACCGTCACGGACGAACTTCTGGGAAAGGGAGGCTTCGGCGAGGTGTACCT GGCCGACTACAACGGCCACAACGCCGCAGCGAAGGTCTGGAGCCATCGTT GATCAATAATCTTGAGACAGCTACAGAGCAGTAGCAGCAGCCTGCAGGGC CTGGAGGGAGGGAGGACCGACCCCCACCTCTCTACAGATGTCACTTTTCA CTCATTTTGCTTTCCCTCTGTCCGTCGTGCTATCTCCTCTTTCCTCGCCG ATTGCTGATGTTGCTGTCACTCGACGACACAGGTGCAGCATTTCACCCAC GGCTTTGGCAGACTGAGCCAGGACGACGCCCTGGATGGGGCAAGGAAGGG CCAGCCCGATGCACAGCGCGAAAAGAGCCTGCGCAAAGCGTTCCTGCGCG AGCTGGACGCGATGATTCGCCTCAGGAGCCCTCATACCGTCAACGTCTAC GGGGCGATCACCTCACTGCCGGACCGTCTGATTCTAGTAATGGAGCTGCT CGTGGGTGGTGACCTCCGAAACATGTTGAAAACCTCCGAGCAGCCGCTCC CCGAAGAACAGTCCCGGCAGATCATCGGAGACATCTGCGCGGGGATGACA TTCTTGCACAGCAAGGGGACGGTGCACGGGGACCTCAAGTCTGCAAATAT TCTTCTGGATGCACGTGGAAGGGCAAAGGTACGGGCGGTACCTCTAAGCT TGTTTTGAAGTCAAGAGTCGGTCGTCTTGTTGTTCAGAAGTGTTACCGTT TTGCCTGGGTTGTTCGTGGACGCCTCCCGTTTTCCTGTCGTTCCGCGGAT TTTACGTATTTTTTGTACGCGTACGTCTTCGTTGAGCACTAATTTAGAGC TGGAGTGACGGCTACATGGGTATGGTGTTGTTGTTGTTGTTGTTGTTGTT TGTTGTTGTTGTTGTTACTGTACCGTGTGACATGATGAGCCGCTCCGAGT GCTGTCCAGTACTCACATTGCGTGTTGATGCAATGAGTGGAACACGACTT CCGCGGCCATACAAACCCCCCCAAAAAATCCCAAGAAGGTGAAAATGTAT CACGTCATCAAGAAAATACTAAGTAGTTACCTGCGCGACGGCTTGTTTCC GACCTCCAGATCGGGGACTTCGGTACGTCGAGGTGGACTCAGAACACCGA GAGATCCACAGGCCTGGCCGCCTATACCACCAAGCCGGGAGCAAGCACCC ACATCAGCTTCGCATGGACTGCGCCAGAGGTGAGGAGGACTCATTTACGA CGTACTAGTAATTCGAAGTACTATTTACGAATTTCCTAACTTCTATTTTA GGGTTTGTGCAGCTGGTCTAGCCCGTGCCAGAGGTACGCGCAAAGAGCAA GTCGGTTTTGCCAGGCAGCGATCACGTACATGTTTATGTACAAAAAATAA AAATGGAACAATGCCATTTACAGAGACCGGAAAGCACTGCAACAGTGACG GGGGTCAGAACGCGTGCATGTGGAAGGATGTTGCCGCGGAGATGCAGCTC GCTGTCACATCTCCCATAAACGCGAAAAGAGTGCAGATACTTGTTGCTGT AGATGGAAATTTTGAAAGCTTCTATGATACGGGGGTATGTATAGCGTGCA GCGTCCTGACCGGGCGGCAGCATGTATGAATGGGCGTGTGTTTTAGTCTA CACCACATTCGGTTCATGTCGGGGCATCAACTAGGCGTCGAACAGAAGGA AGGCCAACACAGTTTTGTTTTTCGTGAACCGGGTCTAAGAAAGTCTCTTT ACATGGGTTTGGAGAAGGGCATGCATATATTTTGTCACCCGATTGCGTAC GTGACGTTTGGCGTTAGTTAGTCTCTTGACTCAATTTCTATCTCTGAGTA TGATCCGCGCGTTTGGGCTCCTGTCGAACTCAACATCCGTTTACCCTCCG GCGAAGGAGCGAAAATTGTACTTGTAAGCAGCCTCGAAGCCTTCAGAGCA TGCTTCGCGAATGTGATGTGTCCCCATCAGCATGTATGCACCTTAGCTTC GCCTTCGATGGGGGCGGCGCTCATATAATGCGACGATTGTCTACGGTCCC TCTCGGCGTGCGCGAAGGTCCTGGAGACCAACGGAACCTCCAACGCAAGC GATGTCTACAGCTACGGGATGGTGGTGTGGGAGGTACTATCCAGAAAAAC ACCTTGGGCTGATCAAGCTCTCCCCCGCGACATTTACCTCCGCGTCGTCA TCCGTGGAGAACGTCCGGTGATCCCCGACGACGCCCCTGCAGATATCGCA GAGATGTTGCTGGGCTGCTGGGCCCAAGCACCCCAGGAACGACCGACGTT TCAGGCGCTCATGGACGGAGTTATGTCCGACAGGCGGCGGTGAAATAGTT TCCGTACTTATCGGAGAGGACGAAAAGGGGTACGCCCTGTTATCCCCGTC CGATACAGTACATCGACGGCGGGGAGGGTGTCATATTTCGGTATGTCGAA GGCGGTGCTTTGTCGTTTGGGATATCTGGCGGAGGTGATTCGGAAAACCG ATCGTTTAACTTTCGCACCCTCTCCTCTTGGTCGAGAATGGGGCAAGAAC ATTAGCGTTAAACCAGGCGCGTTTTCTCCGATGACCAAAGGCGGCAGTAT TCTTGACATGTTCGACCGTGGACAACCTTGCAAAAGTCTTGACATACAGT ACAGCAGTAGAGTTTTTGTTGTTGACGAAATGCATGACACCCAGCCCGTG ATCTGTATCATGTGTACTGTGTTTCTGACCTTAGGAGGACCGGAGTGTGT GCGTATTATTGGCATTTGATTTCGGTGACCATATTTATGAGAAAATTTGT AAATTTAGCTTTCTGAGGACCGGAGACAAGTTAGCGAGCAGTACATGAAT TGAAAGAGATGTAAGTGTTTTGGACAGCTTGTTTGTAAGTTCGACGTTAT GAGAACCGGGGTGTGTAGTGAGAGGGTATGGGTGTATTGAGTGATTAATT TGGCGAACCGTTGATGTGTAAATTTAAACTGAGCGTTATGAATGAGGATC GGTAAGCAATCAGTGAAGTGTGTGAGTGAACACGTTTTGGATAACTTTTG TTTCCGTAAATTTTACATATGAAGAAGAGAGAGGGAGGGACGGGAAGAGA GAGTAGATGACGACGAAACCTTTCACGTGCCTTTCTCGGGTGCTCTTGAT TTTGCTGGTCGTCGAGACTGCGATCTGGGAGAAAAAATGCAATCCTGTTC CCACGGCCGTCTTGGCGCCGTGCTAGAACACAAACCTGGGGCGATAGGCT CTCAGATGGGGTGCTCACTTTTTGGAAGCTGAGAGGCTATCACCGCGGAA GTGAAATGAGAAGGGAGGATCTGGCTGGACCCCTGTCGTTGGCACCATCC AAACAGTCGAACATACGAGGGAAGAAGTACACTCCGTTTTTCCGACTGGA TTCAAATACCGTTCAGTCCATGTTGATTCAATAAGCGGGCTCTTCAGCGG CCTATTTTCTGTCTGCCAGCGCCCCGGAAATAATTCGAGCTACAGTAAGG GCGACTAAATGCAGCTGCAGTACTAGGTAGAGCTCCATATACATACTAAG GTCGCACCGGTGGTTCAGTGGGTAACCTCGAAAGTTTAACTTTATGACGC CTGTAGATCGCAAGTTAAAACCCTCATGAACTGGGATTGGATCTCACCCA ATACCAATATGTGGTTTGTGACCACGGGTTAGACTTTAGTGGCGAGTCAA TGTGAGAAACAACCTGCGAAGTGGAGTGTGATCTTTTCGCGCGTAAACAA GACATGTGACTCGACTGAAGGCGGCGAGGGAAAGAGGCGGTCAAACC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig632:18327..35023+

>mRNA_P-littoralis_Contig632.9.2 ID=mRNA_P-littoralis_Contig632.9.2|Name=mRNA_P-littoralis_Contig632.9.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2601bp|location=Sequence derived from alignment at P-littoralis_Contig632:18327..35023+ (Pylaiella littoralis U1_48)
ATGACGAACTGCTCGGATGGAGATTCCTTCCGTGTCGTTGCTGACATCAA
CTACGTGTACCTCGAGTACGGCGTGTTCTCGAGTCCGGACGGTTGCTACG
GAGCCCTGGACTGCCAAGTCACCGGTGAAGAATCTGAGGATCATTTCTGC
ACGGGCGGCGAATACTCAACCTACGAGTATTACTTCAGGACATACACATT
CGACGATGTTGAAGTATGGGTATTCGCCAGTTATTATAACGGTACATACA
ACCCCCGGTGTCGAGACTACTACGACAACGACTATTCTACGTTGCACCCC
ACGGAAGTCCTCTATTGGGCTTGCGAAAACAGCGATGGGGAGTTTACACT
CTTCCCCGAGTTTGTGACCACTTGCGGCTGCAGCACTCCTGCTCCTACTA
CCACCCCCGAGCTTACTTCTGCTCCTGCCGCCACCTCCGAGCCATCTGCT
ACGCCGACCACCCCAGTTTCCCTCGCCTCCGACGGGAGCGGAGGCGCTAC
AACGGTGGTTGTTGTAGTCGGGACTTTGGTGGCCGGCGCGCTGGCGGTGG
CAGCGCTGGTGTTTTACCTGAGGCGCCGACGAGTCGCGAAGAAAAAGGAC
GTCAACCCTCCGGCCCCTCATCCCGACAGCAGTGCGGGCGACCTTGAGCA
TGGCCGTGAGCACCGGCAAGAGTGGGACGGTAAATCCCCTACATCGATCG
GTGTCGCCGGAGGCAACGGAGTCAGCGACCCGTCTTCTCAGCAGAGAGGT
CCGCCACCGCCGTATTCGGATACATATTCCCGCAACGCTCTGCCAACCCC
CAATCAACACGCGGCGGCAGTGGTAGCGGCAGAGACCAACAATGACGATT
GTGGACGCGCCCAATCGTTGTCTACAGCACCACTTGCTGGCGCTGCTATG
TCCAGAACCGATCAAACCGCGTACCAAGGCAAGGGTATTGGAAGGGCGCC
TGCCGGCCGGGGAACGGGAGACTGGTCATCAGCCCAGCAATTGTTGTTGA
CGGCGACGAACTCTACTGCGGGCTTGACGACGGAGGCGCGCACCGAGCTT
GCCGTTGGAGAAATTTCGGCAGAGGAAGATGCCGATCTTCCTGCCGACGG
ACCAACGACAGCCTCAAGAGAGAGCGCAGCATCGTCGATAGCCGCCGGCC
GAAGGACGCCCTGCGACATCGGGTGTGGTCAGGCAGCGATGGTGGCGGCA
CAGCAGCTGGCGCACAATTGCCAGATCCCCGGCGTCAGCGAGGCAGTGAC
GGTGGTGTCGATGCTGATACAGTTGGTGTCGAACAGTAAGGACGACGTGA
GCCGGGTCGACGCCAGGCTTAGGCGGTGCCGGTCGATCGTGATGATGCTT
GAGCGGGCGGCGAAGGTGCTTGGCAAGGGTGGCGATACAAACGGAGAAGT
TGAGCGCGTTTTGGTGGAAGATGTGCACGACGCCGTCTGCGATCTCGTCG
AGCTCATTAAGGCGTACGAAAGCAAGAACAAGATGTCTAAGGTATTAACG
TCGACCCTGTTCAAGCGGCGCCTGGACGAGCTAGACGCGGTCGTGGACCG
AGCCATCTTACGCCTGCACCTGGGCCTGCAGGTGCAAGTGGGACACAATG
TCAAGGAAGGGTTGTATCTACACAAGACGTCTACGGCGAAGGCCGAAGCG
GAAACTCTGGCGAGAGCCCGTAGCGCGAGGCGGCAGCGCAAGCTAAACCA
GGTTGAAATCCCGGAGGACCACGTGACCGTCACGGACGAACTTCTGGGAA
AGGGAGGCTTCGGCGAGGTGTACCTGGCCGACTACAACGGCCACAACGCC
GCAGCGAAGGTGCAGCATTTCACCCACGGCTTTGGCAGACTGAGCCAGGA
CGACGCCCTGGATGGGGCAAGGAAGGGCCAGCCCGATGCACAGCGCGAAA
AGAGCCTGCGCAAAGCGTTCCTGCGCGAGCTGGACGCGATGATTCGCCTC
AGGAGCCCTCATACCGTCAACGTCTACGGGGCGATCACCTCACTGCCGGA
CCGTCTGATTCTAGTAATGGAGCTGCTCGTGGGTGGTGACCTCCGAAACA
TGTTGAAAACCTCCGAGCAGCCGCTCCCCGAAGAACAGTCCCGGCAGATC
ATCGGAGACATCTGCGCGGGGATGACATTCTTGCACAGCAAGGGGACGGT
GCACGGGGACCTCAAGTCTGCAAATATTCTTCTGGATGCACGTGGAAGGG
CAAAGATCGGGGACTTCGGTACGTCGAGGTGGACTCAGAACACCGAGAGA
TCCACAGGCCTGGCCGCCTATACCACCAAGCCGGGAGCAAGCACCCACAT
CAGCTTCGCATGGACTGCGCCAGAGGTCCTGGAGACCAACGGAACCTCCA
ACGCAAGCGATGTCTACAGCTACGGGATGGTGGTGTGGGAGGTACTATCC
AGAAAAACACCTTGGGCTGATCAAGCTCTCCCCCGCGACATTTACCTCCG
CGTCGTCATCCGTGGAGAACGTCCGGTGATCCCCGACGACGCCCCTGCAG
ATATCGCAGAGATGTTGCTGGGCTGCTGGGCCCAAGCACCCCAGGAACGA
CCGACGTTTCAGGCGCTCATGGACGGAGTTATGTCCGACAGGCGGCGGTG
A
back to top