mRNA_P-littoralis_Contig631.49.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig631.49.1
Unique NamemRNA_P-littoralis_Contig631.49.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 586 bits (1511), Expect = 1.090e-205
Identity = 278/332 (83.73%), Postives = 301/332 (90.66%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTWEHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLSR 996
            R+ HPVEHKV+ACLTIL RGN FGSIY LSWMS+  VQK FH+FC+HFATEMYDEHIFLP++ENGELDRVMGQYEKLGFPGAMGSTDVTHI W RCPYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK+RFRILKLAMTYQ+QER+DYVFFTCCILH MLHT DGM  LEE+VNWV SAELQ+T  HN+DS+SVGTKD+N+KPQ+EA HA LKR+LTT++LYRKK K+DIVWLSR
Sbjct:  119 RRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 7.790e-175
Identity = 252/359 (70.19%), Postives = 278/359 (77.44%), Query Frame = 1
Query:   10 HPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLSR 996
            HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFC+HFA EMYDE I LPT+E+G+LD VM QY++LGF GA+GS DVTHIAW RCPYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTC ILH MLHT DGMD L EN NWVSSA + +T   E   D  SVGTKDVN++PQ+E  H + KRQLTTS+ YRKK K+DIVWLSR
Sbjct:   80 HPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 1.120e-162
Identity = 223/301 (74.09%), Postives = 249/301 (82.72%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQS--TWEHNVDSTSVGTKDVNEK 897
            RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS  D+LFSKRLESVRKDVECFFGILK  FRI K+AM Y EQERID VFFTCCILH MLHT DGMD L EN  WVSSA   +    E   DS++VG KD N+K
Sbjct:   90 RQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 463 bits (1191), Expect = 4.380e-159
Identity = 228/326 (69.94%), Postives = 257/326 (78.83%), Query Frame = 1
Query:   25 KVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLSR 996
            +V+A LTIL +GNCF SI+ +SWMS+  VQ  FHKFC+ FA EMYDEHI LP +E+G+L  VM QY++LG                 CPYNQARSYTGK+  PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILH MLHT DGMD L EN NWVSSA + +T   E   D  S GTKDVN++PQ+E GH + KRQLTTS+ YRKK K+DIVWLSR
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 4.130e-155
Identity = 218/280 (77.86%), Postives = 242/280 (86.43%), Query Frame = 1
Query:  154 MYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQST--WEHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 987
            MYDEHI LPT+E+G+LD V+ QY++LGF GAMGS DVTHIAW RCPYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QERID VFFTCCILH MLHT DGMD L EN NWVSSA + +T   E   DS SVGTKDVN +PQ+EAGHA+ KRQLTTS+ YRKK K+DIV+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 1.270e-138
Identity = 208/336 (61.90%), Postives = 250/336 (74.40%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTWEHN--VDSTSVGTKDVN---EKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLS 993
            R+G PV+ KV+ACL ILARGNCF  IY +S++S      TFH+F ++FA EMY EHIFLPT +  +  +VM QY++LGF GA GSTDVTHI WG CPYNQARSYTGKEG PT+ YQVTV+H  RVLAVT GFTGSTNDK+II +D AV +IR+D  Y+EK F VY  DGT   LKGCYL+VDNGYHKW TLI PSKYP+   DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y +QE ID VFFTCCILH MLH+ D   ++EE  NW  +A L + WEHN  +D +SVG K  +   E  ++E+G    ++QL  S++YRK  K DI WLS
Sbjct:  150 RRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKS-KNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 2.060e-138
Identity = 204/334 (61.08%), Postives = 254/334 (76.05%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTWEH--NVDSTSVGTKD-VNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLS 993
            RQ  PVE KV+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILH MLH+ D   D+ E  NW  SA L +  +   N D +SVG+ D  +E  ++E G   L+ +L T+++YR++ KRDIVWLS
Sbjct:  166 RQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 1.500e-136
Identity = 199/330 (60.30%), Postives = 250/330 (75.76%), Query Frame = 1
Query:   13 PVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTWEH--NVDSTSVGTKD-VNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLS 993
            P   +V+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILH MLH+ D   D+ E  NW  SA L +  +   N D +SVG+ D  +E  ++E G   L+ +L T+++YR++ KRDIVWLS
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 6.150e-128
Identity = 204/334 (61.08%), Postives = 232/334 (69.46%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVWLSR 996
            R  HPVEHKV+A LTIL R NCF SI+ +SWMS+  VQ  FHKFC+HFA +MYDEHI L  +E+G+LD V+      G                 CPYNQARSYTGKEG PTI YQV                      TI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRL+SVR+D     GILK RFRILKLAM YQ QERID VFFTCCI+H MLHT DGMD L EN   VSSA + +T   E   D  SVG +DVN++PQ+E G  + KRQLTTS+ YRKK K+DIVWLSR
Sbjct:  164 RASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459          
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.310e-114
Identity = 184/335 (54.93%), Postives = 222/335 (66.27%), Query Frame = 1
Query:   46 ILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTSDGMDDLEENVNWVSSAELQSTWEHN--VDSTSVGTKDV------NEKPQIEAG----------HALLKRQLTTSYLYRKKIKRDIVWLSR 996
            +L +GNCF  +  LS MS ++ Q TFHKFC+HFA EM+DEHI+LPT     LD VMG + +LG+ GA GSTDVTHI W  CP+   RS+TGKEG PTI Y VTV+H GR LAVT GFTG+TNDKTII +D+ V++IR   QYTE+ + +   +GT R  +GC+LIVDNGYH+W TLI PSKYP    D  FS+ LESVRKDV CF        RILKL M Y ++E +D +FFTCCILH MLHT DG+D  EEN +W  SA     WEH+   D TSVG+K V       EK +   G          HA LKRQL  S+ +RKKI  DI WLSR
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTY--LDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKIN-DITWLSR 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE1.090e-20583.73Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE7.790e-17570.19DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE1.120e-16274.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE4.380e-15969.94DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI4.130e-15577.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAU4_9PHAE1.270e-13861.90Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.060e-13861.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.500e-13660.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE6.150e-12861.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.310e-11454.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig631contigP-littoralis_Contig631:162977..166118 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1473
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.34e-158
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size969
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791318.8646622-UTR-P-littoralis_Contig631:162976..1630031680791318.8646622-UTR-P-littoralis_Contig631:162976..163003Pylaiella littoralis U1_48UTRP-littoralis_Contig631 162977..163003 +
1680791318.8810174-UTR-P-littoralis_Contig631:164349..1643521680791318.8810174-UTR-P-littoralis_Contig631:164349..164352Pylaiella littoralis U1_48UTRP-littoralis_Contig631 164350..164352 +
1680791318.9176757-UTR-P-littoralis_Contig631:165644..1661181680791318.9176757-UTR-P-littoralis_Contig631:165644..166118Pylaiella littoralis U1_48UTRP-littoralis_Contig631 165645..166118 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791318.8924263-CDS-P-littoralis_Contig631:164352..1648831680791318.8924263-CDS-P-littoralis_Contig631:164352..164883Pylaiella littoralis U1_48CDSP-littoralis_Contig631 164353..164883 +
1680791318.9051392-CDS-P-littoralis_Contig631:165206..1656441680791318.9051392-CDS-P-littoralis_Contig631:165206..165644Pylaiella littoralis U1_48CDSP-littoralis_Contig631 165207..165644 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig631.49.1prot_P-littoralis_Contig631.49.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig631 164353..165644 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig631.49.1

>prot_P-littoralis_Contig631.49.1 ID=prot_P-littoralis_Contig631.49.1|Name=mRNA_P-littoralis_Contig631.49.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
MACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLP
TDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGK
PTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEK
TFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRL
ESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHIMLHTS
DGMDDLEENVNWVSSAELQSTWEHNVDSTSVGTKDVNEKPQIEAGHALLK
RQLTTSYLYRKKIKRDIVWLSR*
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mRNA from alignment at P-littoralis_Contig631:162977..166118+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig631.49.1 ID=mRNA_P-littoralis_Contig631.49.1|Name=mRNA_P-littoralis_Contig631.49.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3142bp|location=Sequence derived from alignment at P-littoralis_Contig631:162977..166118+ (Pylaiella littoralis U1_48)
CGGCAAGGCCACCCAGTGGAGCATAAGGTGAGGTTAGGAGGTGCTTCACT CACTACTTTGGCGGTTGTACAGGTGGTGGAAGCAGTAGACTGTCTGCATG CATGTCTTGCACTATAGAGTAGTATAAGATTATCACACCAGTGATAAAGT ACTACCCGACAGTCAGAACACCACTAATGTGTGACCGTTTCTAGTGTGCA GGCTCCTTATTTGGTCCAGCGATTATTTTTCTCCTGAGACCGTTTCTTAC GGCTGCGTTATCCAGCCCCCAATCCCCCAAAAAAGAGAGCCCAAACGGTT GAAAAATATACTTCTTGAGCACAACAGGAGATAGCACCGAGCAGAACTCG ACCCCTGGGACACCAATCGAGACTATAACTGTTAGACGGTACGCTCTAGT GTGCTCAGGTTGGCCACAGGAAATTTAATGGGTGTGGGCTTCGGCTGTGG CGAGGTTTCGGCGGCGGAGTGGGTTGAGGTAGGAAAATCCGGTGGAAAAA AAACGCTGTCCGAGCCTGTTTTTTGGCCGGAAAAACAGGAGCGAAGTCTG TTACTCCGTATTTCGTTTCATCTATTTTTCCATCTCCAACACACACCGCC GCCAAAATCTCGCCACAGCCCGAACCCACTGCCACCAAACTTCCTGTGGC CAACTTGAGAACGTAGGAGCACACGATCTATCAGGTTTTATTGGCATCTG TGTCGTAGGGGTCGAGTTCTGGTTGGTGCTGTCGCACGATGTGTGCAATG GCGATCAAACCTATCGCCACGTCGCTTCAGTGTTCTGAGATTGGCCATGG CAAGTTTGATGGGTGTGGGCCTTAGCTGCTGTAAGATTTTGCCGGTGGTG TACGTCGTGGTAGAATAAACAATGCCAAAAGAATCCTGTTCGAGCAGGCT CGCACGGAAACAAAACAGGCTCGAACACAGCAGTCCACACATATTTTGTT TTTTTGTCATTGTTTGGGATATCTCAAACCACACCGCCGCCAAAACAAAT TCGACACAGCAAAAGCCCACACCCACCAAACTCCCTTCGGCTAAAACCTC AGCAAACGGGAGTGCACGCTCCAACAGGTTTGATCGCCATCGCTGCGTGC CAGAGGCCAAGTTCCGACTGGTGTTGCCGCGTGATGTGCTCaAACAGTGT TTTGTTCGGTCGTTAGGAATCTTCTCCGTTTCGTATGACGGGGGGGGGGG GGGGGGGGGGGATCAAAATGATACAATACTCAGGAAACCAGAACCAGCCG TATGACCAGCCTCACATTGTTCACACCTTCTTATTTTGATAAAGCACAAC ACCTTACATGACACCTTGTGGCTGATTGCGTGGATTCCCGTCCAATCAAC AAATGTTGCGATTGGTGCTATAGGTGATGGCCTGCCTGACCATACTCGCC AGAGGGAACTGTTTCGGAAGCATCTACATGCTTTCGTGGATGAGCAGCGC GGTAGTGCAGAAGACGTTCCACAAATTCTGCAAGCACTTCGCGACGGAAA TGTACGACGAGCACATCTTCCTCCCGACGGACGAGAACGGCGAGCTTGAC CGCGTTATGGGACAGTACGAGAAGCTGGGGTTCCCGGGCGCAATGGGTTC CACTGATGTTACCCATATAGCGTGGGGTAGGTGCCCCTACAACCAAGCCC GCTCGTACACTGGAAAGGAAGGCAAGCCTACCATCGGGTACCAGGTGACG GTCAACCACGCTGGGCGCGTGTTGGCCGTGACAGAGGGGTTCACAGGGTC CACCAACGACAAGACGATCATCTGCTGGGATGCAGCGGTGGACCGGATTC GCAAAGACAAGCAGTACACGGAAAAGACATTTGACGTCTACAACAAGGAT GGCACCACGCGAACCCTGAAGGGTTGCTACTTGATCGTTGACAACGGTTA CCACAAGGTGAAAAATGTTTGGTATCACATGGAACGCGATTGTGTTTTTG TCGAATCGCATGGGCATTTTTGGCCGAACAAAAGTTCCTCCCAGTTAGCC GCGCTCAAAATTGTCCCCCAGGTCCTCTTGGGTGCTGTGGACATGATTGT GTGACACTGAATTACTCCCCATAATGGTGTTGTTGAAGCTGTGGGGGGAT GAAGCAGTCGACATGTTTACACAGTTCGTTTAGTACCCAATCCTCAAAAT GAAACGCGGTACAGGACGAGTTATTAATACTTGATCATTCCAGGTGCACC CTTTTTTTTGTGTTCGTTCGTTCTATTCAGTGGCGGACGCTGATCGAGCC CTCCAAGTACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGG AGAGCGTAAGGAAGGATGTGGAGTGCTTCTTCGGCATTCTGAAGATTCGC TTCAGAATCCTCAAGCTCGCCATGACCTACCAGGAGCAGGAGCGCATTGA CTACGTGTTCTTCACGTGCTGCATCCTGCACATCATGCTGCATACCTCCG ACGGCATGGACGACCTGGAGGAGAACGTCAACTGGGTCAGCAGTGCCGAG CTCCAGAGCACGTGGGAGCACAACGTGGACTCCACCTCGGTCGGGACCAA GGACGTCAACGAGAAGCCCCAAATCGAGGCGGGGCACGCGCTGCTCAAGA GGCAGCTGACCACGAGCTACCTGTACCGCAAGAAGATTAAGAGGGATATT GTTTGGCTTTCTAGGTGAACGTGTGCGTACACGACTTGGCGTGACACCGC AGTAGATCACGGAATGTTCACAACGGTGTTGTTGCTGCCCCCTCCCCCCG CTCCCCCTTCTTGGGGATGTACATCACCGATAGTCGTGTGTCTGTGTCTG TGCCCAACCTGACTTGTTTTGTTCTTGCGTATGATGCACATGATGTCGTG TGCGTAGGTGTGCCATTTCTACTAGTCTCGTCTCTGGTAGCTTGGGCAGC ACATTGTTTGTGGCATCACCCCACACGAGATAACGGACTCTTGACAACAT TGAAGCTGGTCCCGGGCCCTTGTAGTTTGGACGTTAAAAACCGGTGTTCG TTTATATCAGTATTGTGCAAACCATTTTTTGTCGGGGTGCGCGCGTGCTA GGTTGTTCTTCGAAGTACTCGCCTGTAAACTTGTCTGTGTCGGTGTCTGT GCCCGTCCTCCCCTTGGGTTATTTTGCACGCGTTTGTGAGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig631:162977..166118+

>mRNA_P-littoralis_Contig631.49.1 ID=mRNA_P-littoralis_Contig631.49.1|Name=mRNA_P-littoralis_Contig631.49.1|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig631:162977..166118+ (Pylaiella littoralis U1_48)
ATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTCGGAAGCATCTA
CATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGAAGACGTTCCACAAAT
TCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACATCTTCCTCCCG
ACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGACAGTACGAGAAGCT
GGGGTTCCCGGGCGCAATGGGTTCCACTGATGTTACCCATATAGCGTGGG
GTAGGTGCCCCTACAACCAAGCCCGCTCGTACACTGGAAAGGAAGGCAAG
CCTACCATCGGGTACCAGGTGACGGTCAACCACGCTGGGCGCGTGTTGGC
CGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACGATCATCTGCT
GGGATGCAGCGGTGGACCGGATTCGCAAAGACAAGCAGTACACGGAAAAG
ACATTTGACGTCTACAACAAGGATGGCACCACGCGAACCCTGAAGGGTTG
CTACTTGATCGTTGACAACGGTTACCACAAGTGGCGGACGCTGATCGAGC
CCTCCAAGTACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTG
GAGAGCGTAAGGAAGGATGTGGAGTGCTTCTTCGGCATTCTGAAGATTCG
CTTCAGAATCCTCAAGCTCGCCATGACCTACCAGGAGCAGGAGCGCATTG
ACTACGTGTTCTTCACGTGCTGCATCCTGCACATCATGCTGCATACCTCC
GACGGCATGGACGACCTGGAGGAGAACGTCAACTGGGTCAGCAGTGCCGA
GCTCCAGAGCACGTGGGAGCACAACGTGGACTCCACCTCGGTCGGGACCA
AGGACGTCAACGAGAAGCCCCAAATCGAGGCGGGGCACGCGCTGCTCAAG
AGGCAGCTGACCACGAGCTACCTGTACCGCAAGAAGATTAAGAGGGATAT
TGTTTGGCTTTCTAGGTGA
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