mRNA_P-littoralis_Contig631.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5KYT9_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYT9_9PHAE) HSP 1 Score: 126 bits (316), Expect = 2.880e-33 Identity = 63/104 (60.58%), Postives = 81/104 (77.88%), Query Frame = 1
Query: 1 MDDYEDDEEVDAENDRSTREIKRRRIFERKDYKTSCWWQEL---QDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKVS 303
M+D+EDD E+D E+D ++RE+KRRR++ RKDY S WWQEL ++ DHT+R ARRFR FR+PY FFV LV LV++RDWFPTG+ DV GR ++PVELKVS
Sbjct: 41 MEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVS 144
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.340e-30 Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 1 MDDYEDDEEVDAENDRSTREIKRRRIFERKDYKTSCWWQEL---QDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
M+D+EDD E+D E+D ++RE+KRRR++ RKDY S WWQEL ++ DHT+R ARRFR FR+PY FFV LV LV++RDWFPTG+ DV GR ++PVELKV
Sbjct: 73 MEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKV 175
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5K671_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K671_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.230e-29 Identity = 61/103 (59.22%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 1 MDDYEDDEEVDAENDRSTREIKRRRIFERKDYKTSCWWQEL---QDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
M+D+EDD E+D E+D ++RE+KRRR++ RKDY S WWQEL ++ DHT+R ARRFR FR+PY FFV LV LV++RDWFPTG+ DV GR ++PVELK+
Sbjct: 290 MEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKI 392
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5JQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR5_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.450e-25 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 1
Query: 37 ENDRSTREIKRRRIFERKDYKTSCW---WQELQD---EDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKVS 303
E + REIKRRR++ RKDY S W QEL+D + ++ TSR ARRFR FR+PY FFVELVALVK+RDWFPTGK+D +GR IPV+LKV+
Sbjct: 66 EEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVGPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVN 160
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.870e-24 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 37 ENDRSTREIKRRRIFERKDYKTSCW---WQELQD---EDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
E + REIKRRR++ RKDY S W QEL+D + ++D TSR ARRFR FR+PY FFVELVALVK+RDWFPTGK+D +GR IPV+LKV
Sbjct: 66 EEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKV 159
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.510e-19 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 70 RRIFERKDYKTSCWWQELQDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKVSPY 309
R++ ER+D+ TS WW +LQ+ DLLDHT+ AA+ FR FR+P+ FF+ELV + + + WF +KD GR IP+ELK+S Y
Sbjct: 65 RQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSY 144
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.120e-19 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 70 RRIFERKDYKTSCWWQELQDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
RR+ +R+D++TS WW++LQD DL DHT+ AA+ FR FR+PY FF ELV L + + WF G+KD A R IP+ELKV
Sbjct: 63 RRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKV 139
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A835ZAS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.110e-17 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 70 RRIFERKDYKTSCWWQELQDE-DLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
RR++ER DY+ + W L +E LLD TSR A++FR FR+PY F ELVALV+E+ W P DVAGR IP+ELKV
Sbjct: 39 RRVYERPDYRRTAWMTMLDNEAQLLDPTSREAKKFRRRFRLPYPMFKELVALVREKGWLPCADADVAGRPCIPLELKV 116
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 7.880e-17 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 70 RRIFERKDYKTSCWWQELQDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELKV 300
RR+ +R+D++TS WW++LQ DL DHT+ AA FR FR+PY FF LV L + + WF G+KD A R IP+ELK+
Sbjct: 63 RRVTQRRDWRTSAWWEQLQHVDLADHTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKL 139
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Match: A0A6H5KLY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY4_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.840e-16 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 82 ERKDYKTSCWWQELQDEDLLDHTSRAARRFRCYFRIPYCFFVELVALVKERDWFPTGKKDVAGRASIPVELK 297
+RKD +T W Q L+D+DL D TS A++FR FR+PY FF+ LVALVK ++WF T KD GRAS PVE K
Sbjct: 87 QRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFSTAGKDAIGRASHPVEHK 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig631.34.1 >prot_P-littoralis_Contig631.34.1 ID=prot_P-littoralis_Contig631.34.1|Name=mRNA_P-littoralis_Contig631.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=107bp MDDYEDDEEVDAENDRSTREIKRRRIFERKDYKTSCWWQELQDEDLLDHTback to top mRNA from alignment at P-littoralis_Contig631:93301..93897- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig631.34.1 ID=mRNA_P-littoralis_Contig631.34.1|Name=mRNA_P-littoralis_Contig631.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=597bp|location=Sequence derived from alignment at P-littoralis_Contig631:93301..93897- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig631:93301..93897- >mRNA_P-littoralis_Contig631.34.1 ID=mRNA_P-littoralis_Contig631.34.1|Name=mRNA_P-littoralis_Contig631.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=321bp|location=Sequence derived from alignment at P-littoralis_Contig631:93301..93897- (Pylaiella littoralis U1_48)back to top |