mRNA_P-littoralis_Contig631.32.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig631.32.1
Unique NamemRNA_P-littoralis_Contig631.32.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 9.320e-157
Identity = 209/269 (77.70%), Postives = 238/269 (88.48%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 807
            V+ACLQ+LARGN F DIYHMSFIS+ TA ATFH F R+FAREMY EHI+LPTGDYQ KVM++Y+RLGF+GA GSTDVTH+ WG CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG   Q KGCYLLVDNGYHKW TL+ P+KY I++ D  FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHN
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 1.960e-150
Identity = 198/269 (73.61%), Postives = 233/269 (86.62%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 807
            V+ACLQ+L+RGNVF DIYHMSFIS  T  +TFH FC++FA E+Y E++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHKW TL+ P+K  I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHN
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 4.170e-149
Identity = 198/269 (73.61%), Postives = 233/269 (86.62%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 807
            V+ACLQ+L+RGNVF DIYHMSFIS  T  +TFH FC++FA E+Y E++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHKW TL+ P+K  I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHN
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 9.980e-118
Identity = 166/271 (61.25%), Postives = 204/271 (75.28%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 807
            V+ACL +L RGNVF  IY++S++S PT Q  FH FC HFA EMY EHI+LP+ +     +VM +YE+LGF GA+GSTDVTH+ W  CPYNQ RS+TGKEG PT+ YQVTV+H  R LAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++  DG T   KGCYL+VDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCCILHNMLH++D  G + E+ NW GSA L N
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 9.370e-116
Identity = 163/270 (60.37%), Postives = 202/270 (74.81%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPT---GDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 801
            V+A L +L RGN F  IY +S++S  T Q  FH FC+HFAREMY EHIYLP+   G+    VM +Y+RLGF+GA+GS DVTH+ W  CPYN ARS+TGKEG PT+ YQVTV+H  RA+AVT GFT +TNDKT + +D  V +IRTD  YTE+T+++Y+ DG T   KGCYLLVDNGYHKW  LM PTKY + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCCILHNMLH++D   ++ E   W  SAG 
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELD-HVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGA 367          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 1.010e-113
Identity = 170/297 (57.24%), Postives = 206/297 (69.36%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 801
            V+A L +L RGN F  IY MS++S  T Q  FH FCRHFAREMY E I+LPT +      VM +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+ +D AV +I TD  YT                            E+T+++Y+ DG T   KGCYLLVDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTC ILHNMLH++D   ++ E  NW  SAG+
Sbjct:   86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.460e-108
Identity = 158/263 (60.08%), Postives = 186/263 (70.72%), Query Frame = 1
Query:   16 QVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLH 804
            QVL +GN F D+  +S +S   AQ TFH FCRHFA EM+ EHIYLPTG Y  +VM  + +LG+TGA GSTDVTH+ W  CP+   RSFTGKEG+PTIAY VTVDH  R LAVT GFTGATNDKTIIR+D  V +IRT   YTER Y L  A+G  R  +GC+L+VDNGYH+W TL+AP+KY     DT FS  LES RKDV C        FRI KL +PYHK+E +DN+FFTCCILHNMLH++D      E  +W GSAG H
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHH 296          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.520e-106
Identity = 145/185 (78.38%), Postives = 164/185 (88.65%), Query Frame = 1
Query:  253 CPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHN 807
            CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG   Q KGCYLLVDNGYHKW TL+ P+KY I++ D  FS RLES RKDVEC+FGIVKG FRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHN
Sbjct:    2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 186          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 3.320e-104
Identity = 154/269 (57.25%), Postives = 190/269 (70.63%), Query Frame = 1
Query:    1 VMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 801
            V+A L +L +GN F  I+ MS++S  T Q  FH FCR FAREMY EHI+LP  +      VM +Y+RLG                 CPYNQARS+TGK+ +PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+T++LY+ DG T   KGCY L DNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTCCILHNMLH++D   ++ E  NW  SAG+
Sbjct:   21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 272          
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 3.460e-100
Identity = 141/227 (62.11%), Postives = 176/227 (77.53%), Query Frame = 1
Query:  127 MYHEHIYLPTGDYQTK--VMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGL 801
            MY EHI+LPT +      V+ +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTI YQVTVDH  RA+AVT GFTG+TNDKT + +D AV +IRTD  YTE+T+++Y+ DG T   KGCY+LVDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGR RI  LA+ +  +E IDNVFFTCCILHNMLH++D   ++ E  NW  SAG+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE9.320e-15777.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.960e-15073.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE4.170e-14973.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE9.980e-11861.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE9.370e-11660.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.010e-11357.24DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K796_9PHAE2.460e-10860.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE1.520e-10678.38DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE3.320e-10457.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI3.460e-10062.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig631contigP-littoralis_Contig631:91205..92594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size807
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.46e-101
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size804
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791318.1429212-CDS-P-littoralis_Contig631:91204..914831680791318.1429212-CDS-P-littoralis_Contig631:91204..91483Pylaiella littoralis U1_48CDSP-littoralis_Contig631 91205..91483 -
1680791318.1537282-CDS-P-littoralis_Contig631:92066..925911680791318.1537282-CDS-P-littoralis_Contig631:92066..92591Pylaiella littoralis U1_48CDSP-littoralis_Contig631 92067..92591 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791318.163204-UTR-P-littoralis_Contig631:92591..925941680791318.163204-UTR-P-littoralis_Contig631:92591..92594Pylaiella littoralis U1_48UTRP-littoralis_Contig631 92592..92594 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig631.32.1prot_P-littoralis_Contig631.32.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig631 91205..92591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig631.32.1

>prot_P-littoralis_Contig631.32.1 ID=prot_P-littoralis_Contig631.32.1|Name=mRNA_P-littoralis_Contig631.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=268bp
MACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLP
TGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPT
IAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTY
NLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLES
SRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDN
KGEMGEEPNWAGSAGLHN
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mRNA from alignment at P-littoralis_Contig631:91205..92594-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig631.32.1 ID=mRNA_P-littoralis_Contig631.32.1|Name=mRNA_P-littoralis_Contig631.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1390bp|location=Sequence derived from alignment at P-littoralis_Contig631:91205..92594- (Pylaiella littoralis U1_48)
GTCATGGCTTGCCTGCAGGTGCTGGCCAGGGGGAACGTCTTTCGAGACAT CTACCACATGTCTTTCATTAGCGTGCCGACAGCTCAGGCGACCTTCCACA GCTTCTGCAGGCACTTCGCCAGAGAGATGTACCACGAACACATCTATCTA CCGACAGGAGATTATCAGACGAAGGTCATGAGCGAGTACGAGCGCCTTGG CTTCACAGGCGCGATCGGGTCTACGGATGTCACCCACCTCGCGTGGGGCT GTTGCCCCTACAACCAAGCCCGTTCTTTCACAGGAAAAGAAGGGTATCCT ACCATCGCATATCAAGTGACCGTCGATCACACTAAACGCGCGTTGGCAGT GACACCGGGCTTCACGGGCGCGACGAATGACAAGACGATCATCCGTTTCG ACAAAGCTGTCACCCGGATCCGGACCGACCCGATCTACACCGAGCGCACG TACAACCTCTACGACGCGGACGGGGCGACACGCCAGGAGAAGGGGTGCTA CTTGCTGGTGGACAATGGGTATCACAAGGTTGGTTGTTGCCGAAAGAGAA GGTTTGATTTTGTTGTGCCACCTTATACGTTGGAAGAACAAGCTACCTTG GCCCTTTTGTGACTGAGCCACGAAAAAGATCCCTTTGCAAGTCCTATGTC TTCGATTCGCTTTTTCGCGAAAGGAAAGCTGGTACGCGACGCGTAGCTCC GAAGCATTCGTGAAGATGAACTTTTGATCTTTCACGCTCGTATGCGAGCC TGTGCCTGCATATTTCGGGCATCTTTCGGGCAGTGGTGGTATGCCGAGCT GTGTGTAGCCTCTGTCGTTTTCGAGTGGGGATAATCTTTGTGCAAGGCGG TGTGTTGGTGTGGATGTATGTATGGATAATCAGGGTCGGGTTCGCAGAGG AACGTGCCGCCCTAGGATTAAGGTTCCGGGCCAAAGTCCGTCGCTAAACC CCTGTCACCAACAGGTTAACTCGATAGTTAATGTGCGTTCATCATCGCCA GCATAAACGGGCGGGCGCGTTCGTGGAACGTATCCAAGACCGTATTCCAT CCGCCAACAGCCTCCAAGCCCCCCCTTCCTCCCCTCCCCCCCACCGCCGT CGTCTTCGCAGTGGAACACTCTCATGGCCCCAACAAAGTACGCAATAGAG AAGGGCGATACGGTGTTCTCCAACAGACTGGAGAGCTCGCGCAAGGATGT GGAGTGCTATTTTGGCATCGTGAAAGGCCGCTTCCGCATCAACAAGCTAG CGATCCCGTACCACAAGAAGGAAGACATCGACAACGTTTTCTTCACCTGC TGCATCCTCCACAACATGCTGCACAGCTATGACAACAAGGGCGAGATGGG TGAGGAACCCAACTGGGCAGGGAGCGCGGGCCTGCACAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig631:91205..92594-

>mRNA_P-littoralis_Contig631.32.1 ID=mRNA_P-littoralis_Contig631.32.1|Name=mRNA_P-littoralis_Contig631.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=804bp|location=Sequence derived from alignment at P-littoralis_Contig631:91205..92594- (Pylaiella littoralis U1_48)
ATGGCTTGCCTGCAGGTGCTGGCCAGGGGGAACGTCTTTCGAGACATCTA
CCACATGTCTTTCATTAGCGTGCCGACAGCTCAGGCGACCTTCCACAGCT
TCTGCAGGCACTTCGCCAGAGAGATGTACCACGAACACATCTATCTACCG
ACAGGAGATTATCAGACGAAGGTCATGAGCGAGTACGAGCGCCTTGGCTT
CACAGGCGCGATCGGGTCTACGGATGTCACCCACCTCGCGTGGGGCTGTT
GCCCCTACAACCAAGCCCGTTCTTTCACAGGAAAAGAAGGGTATCCTACC
ATCGCATATCAAGTGACCGTCGATCACACTAAACGCGCGTTGGCAGTGAC
ACCGGGCTTCACGGGCGCGACGAATGACAAGACGATCATCCGTTTCGACA
AAGCTGTCACCCGGATCCGGACCGACCCGATCTACACCGAGCGCACGTAC
AACCTCTACGACGCGGACGGGGCGACACGCCAGGAGAAGGGGTGCTACTT
GCTGGTGGACAATGGGTATCACAAGTGGAACACTCTCATGGCCCCAACAA
AGTACGCAATAGAGAAGGGCGATACGGTGTTCTCCAACAGACTGGAGAGC
TCGCGCAAGGATGTGGAGTGCTATTTTGGCATCGTGAAAGGCCGCTTCCG
CATCAACAAGCTAGCGATCCCGTACCACAAGAAGGAAGACATCGACAACG
TTTTCTTCACCTGCTGCATCCTCCACAACATGCTGCACAGCTATGACAAC
AAGGGCGAGATGGGTGAGGAACCCAACTGGGCAGGGAGCGCGGGCCTGCA
CAAC
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