mRNA_P-littoralis_Contig631.29.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A060SDH7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SDH7_PYCCI) HSP 1 Score: 72.0 bits (175), Expect = 3.770e-15 Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
LC CN++AVACYAA G TFG T GA VP V+LGCN ALGTCMAAC A A+AP P
Sbjct: 29 LCQTGCNSLAVACYAAGGFTFGTVTAGAGVPAVVLGCNAALGTCMAAC----AAVALAPIP 85
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A835TKD9_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TKD9_CHLIN) HSP 1 Score: 71.2 bits (173), Expect = 7.790e-15 Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CN +AVACYAAAG TFGV T GAAVPV IL CN ALGTCMAAC AA ++P P
Sbjct: 30 ICQTGCNAIAVACYAAAGFTFGVPTWGAAVPVAILACNAALGTCMAACV----AAGLSPIP 86
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A0D0CH81_9AGAR (Uncharacterized protein (Fragment) n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0CH81_9AGAR) HSP 1 Score: 69.3 bits (168), Expect = 2.630e-14 Identity = 40/61 (65.57%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CNTVAVACYAAAG TFG AA P VILGCN ALGTC AAC V A +APTP
Sbjct: 8 ICQTGCNTVAVACYAAAGFTFGTVVAAAAAPPVILGCNAALGTCSAACATV---ALLAPTP 65
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A164TMX6_9CRUS (Uncharacterized protein n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164TMX6_9CRUS) HSP 1 Score: 69.7 bits (169), Expect = 3.010e-14 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CN +AVACYAAAG TFGV+T GA +P I+GCNGALG CMAAC A APTP
Sbjct: 28 VCQTGCNALAVACYAAAGFTFGVSTFGAGIPAAIVGCNGALGICMAAC----AATLFAPTP 84
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A0D7AC54_9AGAR (Uncharacterized protein n=2 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7AC54_9AGAR) HSP 1 Score: 68.9 bits (167), Expect = 5.900e-14 Identity = 39/61 (63.93%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CN VAVACYAAAG TFG AA P VILGCN ALGTC AAC V A +APTP
Sbjct: 26 ICQTGCNVVAVACYAAAGFTFGTVVASAATPAVILGCNSALGTCSAACASV---ALLAPTP 83
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: S2JF41_MUCC1 (Uncharacterized protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) TaxID=1220926 RepID=S2JF41_MUCC1) HSP 1 Score: 67.0 bits (162), Expect = 3.400e-13 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CN VAVACY+AAG TFG T GA VP VILGCN ALG CMA C AA AP P
Sbjct: 27 ICQTGCNAVAVACYSAAGFTFGTVTAGAGVPAVILGCNTALGVCMAGCV----AAGCAPIP 83
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A165N0W4_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165N0W4_9AGAM) HSP 1 Score: 67.0 bits (162), Expect = 3.670e-13 Identity = 37/61 (60.66%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CNTVAVACYAAAG TFG AA P ILGCN ALGTC AAC A +AP P
Sbjct: 29 ICQTGCNTVAVACYAAAGFTFGTVVAAAAAPAAILGCNSALGTCSAAC---AATALIAPIP 86
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: A0A835XLR9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLR9_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 3.770e-13 Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAAC 144
+C CN V VACYAAAG TFG T GA +P V++GCN LGTCMAAC
Sbjct: 31 ICQSGCNAVVVACYAAAGFTFGTVTAGAGIPAVLVGCNAGLGTCMAAC 78
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: S8EL77_FOMPI (Uncharacterized protein (Fragment) n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8EL77_FOMPI) HSP 1 Score: 66.2 bits (160), Expect = 4.250e-13 Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CNTVAVACYAAAG TFG AVP VILGCN ALGTC AC V A APTP
Sbjct: 7 ICQTGCNTVAVACYAAAGFTFGTVIAAPAVPAVILGCNTALGTCSTACATV---ALFAPTP 64
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Match: I1BJI1_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BJI1_RHIO9) HSP 1 Score: 66.2 bits (160), Expect = 6.860e-13 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 1 LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGVTGAAAVAPTP 183
+C CN +AVACY AAG TFG TGGAAVP VI CN ALGTCMA C AA AP P
Sbjct: 27 ICQTGCNALAVACYGAAGFTFGTVTGGAAVPPVIAACNLALGTCMAGCV----AAGAAPVP 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig631.29.1 >prot_P-littoralis_Contig631.29.1 ID=prot_P-littoralis_Contig631.29.1|Name=mRNA_P-littoralis_Contig631.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=62bp LCSGRCNTVAVACYAAAGATFGVATGGAAVPVVILGCNGALGTCMAACWGback to top mRNA from alignment at P-littoralis_Contig631:72373..72558+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig631.29.1 ID=mRNA_P-littoralis_Contig631.29.1|Name=mRNA_P-littoralis_Contig631.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=186bp|location=Sequence derived from alignment at P-littoralis_Contig631:72373..72558+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig631:72373..72558+ >mRNA_P-littoralis_Contig631.29.1 ID=mRNA_P-littoralis_Contig631.29.1|Name=mRNA_P-littoralis_Contig631.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=186bp|location=Sequence derived from alignment at P-littoralis_Contig631:72373..72558+ (Pylaiella littoralis U1_48)back to top |