prot_P-littoralis_Contig631.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig631.11.1
Unique Nameprot_P-littoralis_Contig631.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length110
Homology
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BLAST of mRNA_P-littoralis_Contig631.11.1 vs. uniprot
Match: D7FHU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU4_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 4.190e-56
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 
Query:    1 MVVGRRRSFGERENKKDGLVTDIYEEPARGMPNVWCMTVNNTLCVRLVGRCGWGTWRIAYGVDYNVVAAWDAKDGYSTPATRCQTLQ 87
            MVVGRRRSFGERENKKDGLVTDIY+EPARGMPN+WCMTVNNT CVRLVGRCGWGTWRIA GVDY+VVAAWDAKDGYSTPATRCQTLQ
Sbjct:    1 MVVGRRRSFGERENKKDGLVTDIYDEPARGMPNLWCMTVNNT-CVRLVGRCGWGTWRIANGVDYDVVAAWDAKDGYSTPATRCQTLQ 86
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHU4_ECTSI4.190e-5694.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig631contigP-littoralis_Contig631:27894..32697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig631.11.1mRNA_P-littoralis_Contig631.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig631 27160..32697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig631.11.1 ID=prot_P-littoralis_Contig631.11.1|Name=mRNA_P-littoralis_Contig631.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=110bp
MVVGRRRSFGERENKKDGLVTDIYEEPARGMPNVWCMTVNNTLCVRLVGR
CGWGTWRIAYGVDYNVVAAWDAKDGYSTPATRCQTLQVLKKHATRDYPYS
SRVPCFRCG*
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