mRNA_P-littoralis_Contig630.11.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE) HSP 1 Score: 752 bits (1941), Expect = 2.470e-245 Identity = 502/1137 (44.15%), Postives = 654/1137 (57.52%), Query Frame = 2
Query: 839 ERTYKWLSASVERRVTQDWCDVTWLALLAEALRVNIVVWEPSGVGRQVQVYSALGTRGLFLYEKKDRMDEEGDHWLHLFYHCIERPFVARVGVAPGGEAHAMHNHFDWLMLGAESQKAFARAMASGQEEVVNHEALLGKTTEVRGSRKRSRQPGPLEKTNGGSSSKKPVPGRSPLTTGAKEKGKKSAVGGGGRGKLVPR---------KSAATKKPGGVQEKGKKQVAA----------------------DG---SENGK----GGSVLKK----EKDVRYDSDGSIGGGD--DFETRGAFACLTINKKKLVSDIAEIPETPYKRAFLTSSEKKALGRKLLHRANKIKAKKKAEADKKAAEAGRHKTGGKXXXXXXXXXXXXXXXXXXXXXXEIGEVSQDVQWTERGISNFAGTEAHKKRHLREPTAEVSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKLLVDKTNRYVSLCTTEPAEGETDVRKDHQKAKKRTLGYHTLGDPAFEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEANPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GEKECARNEG-IDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAEC---KEGGDSGTLMCRTCFKKEASHTAAAVARVN 4036
++T +W + + + W DVTW++ LA VNI+VWEPS VQ Y T G+FL+EK+D+MDEEGDHW+HL Y P++AR + H + NHFD L LG ++ +F +AS + ++ + G S G EK + S P ++G K+ G +G++ P+ ++A KK G GK + DG +NGK GG K + + YDSDGSIGG D +T GAFA ++ N+KKLV+ + +IPE YKRAF +++++ LG KL KI ++KA K XXXXXXXXXXXXXXXXXXXXXX V WT+RGI +FAGT+ HKKR RE + SLS SA ++LP LD FMD LD E+ KFPL LM+TCFDM FP+EAV L VDKTN+YV+LCTT P G D RK HQ K RTLG TL +PAFE KHIYGM+G+ IT G T KTRMRKHWSRS + PLV +CM RDLFELLYSRF+HCSDGNAPPR + + H R H +R+ + +++ S+ + G R W +T + F S R LE++LN AW EN+D N+WL YDEQM++ VST+A L R P++ ITHG+K++A+CD +GYC +SSVDGGM G KLR WF+CPL RTTR VL VLLGA K+DGSGV+IAM + FT+P LFECLASHDIFAVGTCRS+RT GA YL+SLDR VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP GE + ++G DHF PLPY RK + + QP MRKDY A MGGV+TAD+QNGS+ H H+S N+WR VM +Q+ TN F+ F+++V +L+ +A +R+E + E+L + ELGR AK+ERA DE+++ LM RC++G N GGR P+ +VWGS+ VK R CM+P C ++ GC+CAE K+ GD G LMC+ CF H A A+ N
Sbjct: 82 DKTVRWF-CDLAWQSAEKWVDVTWMSFLASEYGVNIMVWEPSAKHGTVQAYLGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR------NQNHNL-NHFDRLQLGHDAAASFVDVVASAKLQLGTVTLMPSAIYTAGGEAGGSSLVGGEEKDHPDFSMGPPXXXXXXXXXXXXKEGVKAGAGKKKKGEIGPKVVVKRPTAGQTAENKKLKGRGASGKHKAGVAPGXXXXXXXXXXXXXXXXXXXDGRRAKKNGKTTPTGGRKSSKANGEDDNANYDSDGSIGGRDVDHTQTPGAFATMSQNRKKLVTAMKKIPERGYKRAFWLTNKRRELGMKL----KKIADEEKARLKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWTDRGIPDFAGTDDHKKRTQRETVSAASLSASAREKLPSLDTFMDNLD-ESGKFPLHGLMMTCFDMMFPDEAVDLFVDKTNKYVNLCTTPPLPGAKDTRKAHQVKKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTMKTRMRKHWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGXMKTR----MRKHWSRSLHDDYPLVRKCMSRDLFELLY-SRFIHCSDGNAPPR---------WTGEDKTPNPE---------FDSKWHI----RELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVHIAMSNNFTSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDDDGGDDHFAPLPYRCFVCIPPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVNTADRQNGSHTHDHESYTNHWRGVMEGKFKQTFTNIFVMFKKYVSLLEGQANKRIEGGGVELEVVEKLDRLLVELGRLAKMERAVWDEMLSTELMARCNVGRPNNGGRPAEVTGAPD--KVWGSISVKTQRKCMHPGCKSKTWKGCACAELCVGKQAGDRGVLMCQACFNNPVRHGRAGDAQRN 1173
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE) HSP 1 Score: 669 bits (1727), Expect = 4.460e-213 Identity = 492/1238 (39.74%), Postives = 633/1238 (51.13%), Query Frame = 2
Query: 290 MRFFFFTLLVVVFGPRPMSAAVDSQGHVPVTGVGTAPREQLPRSAVLGREACAHHGGVLGMRLDCAVQKKASRNAFVPRAGAKVSLTQGDGSCAYHAVGGALTNAVGQSRAKTVLDLKRRTIAGAIQHTMQGTATTAAAATTQQLNESCLSDDQLVRARALYLTTWTEWVNHTEIFQEEPSRSERTYKWLSASVERRVTQDWCDVTWLALLAEALRVNIVVWEPSGVGRQVQVYSALGTRGLFLYEKKDRMDEEGDHWLHLFYHCIERPFVARVGVAPGGEAHAMHNHFDWLMLGAESQKAFARAMASGQEEV----VNHEALLGKTTEVRGSR----KRSRQP----GPLEKTNGGSSSKKPVPGRSPLT-------TGAKEKGKKSAVGGGGRGKLVPRKSAATKKPGGVQE-------------------------------KGKKQVAADGSENGKGGSVLK-KEKDVRYDSDGSIGGGD--DFETRGAFACLTINKKKLVSDIAEIPETPYKRAFLTSSEKKALGRK--LLHRANKIKAK-KKAEADKKAAEAGRHKTGGKXXXXXXXXXXXXXXXXXXXXXXEIGEVSQ---DVQWTERGISNFAGTEAHKKRHLREPTAEVSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKLLVDKTNRYVSLCTTEPAEGETDVRKDHQKAKKRTLGYHTLGDPAFEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEA-NPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GE-KECARNEGIDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQ--------WVPVLKCEAQRRV--EDDVGDTAQKERLGCAINELG 3721
MR FF LL + + AVDS V +E P + LGR H GG + + C+ P AGA V +GDG C ++A+ L +G++R ++ A++H + A + + + LS DQL RA ++ + V H ++ +T +W + R+ + W D+TW++ LA VNI+VWEPS VQ YS T G+FL+EK+D+MDEEGDHW+HL Y P++AR + H + NHFD L LG ++ +F +AS + ++ + A+ E GS + P GPL + + S S GR G K K+ G K + + A+ K GV +G K+ G+ S K+ + YDSDGSIGGG G +K E + L +++ G + L A++ KA+ KKA+ K + H+ G+ XXXXXXXXXXXXXXXXXXXXX DV WT+RGI +FAGT+ HKKR RE + SLS SA ++LP LD FMD+LD E+ KFPL M+TCFDM FP+EA+ L VDKTN+YV+LCTT G D RK HQ K RTLG TL +PAFE KHIYGM+G+ IT G TKKTRMRKHWSRS + PLV ECM RDLFELLY RF+HCSDGNAPPR + NP++D+K HIR LE++LN AW EN+D NQWL YDEQMVK VST+A L R+ P+K ITHG+K++A+CD +GYC +SSVDGGM G KLR WF+CPL RTTR VL VLLGA K+DGSG YIAMD++F +P LFECLASHDIFAVGTCRS+RT GA YL+SLDR VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP GE K+ + G DHF PLPY RK + + QP MRKDY A MGGVDTADQQNGS+ H HKS N+WRRVM EQ+ TN F+ F++ W +L E R + V A +E G + E G
Sbjct: 1 MRPFFLVLLAIFRTSSMNTPAVDSDSDHQVVFRVDKRQELAPPPSALGRRVQEHIGGPQALSMKCSTTLIQGGRVITPLAGAGVHTVEGDGKCGWNALRAGLQACLGRARTPNEQQMRAAVARRAMEHVV-------GAPDVPEDSTAVLSKDQLGRALSVKVPHVLGDVEHGMAAED------KTVRWF-CDLARQSAEKWVDITWMSFLASEYGVNIMVWEPSAKHGTVQAYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR------NQNHNL-NHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGGEEEDHPEFSMGPLPRGSNSSRSSSGTEGRQAGARKTKKGKVGPKVVVKRPTAGQTAENKKLKGRDASGKHKAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGAKKKVKTTPTGGRNSSKANGKDDNANYDSDGSIGGGGRRPQANPGRLRYNVAEPEKAGHGHEEDSGAGLQAGVLADQQEEGAGYEEVLKKVADEEKARLKKADERNKTKQ---HRPRGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVWTDRGIPDFAGTDDHKKRTQRETVSAASLSASAREKLPSLDTFMDSLD-ESGKFPLHGSMMTCFDMMFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRE-------------------------------------------------------------------------------LEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDNYFKSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVDTADQQNGSHTHDHKSYTNHWRRVMEGKFEQTFTNIFVMFKKLGKMERAVWDEMLSTELMARPLNTETVAAPASEEGSGPVVAEDG 1131
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE) HSP 1 Score: 528 bits (1361), Expect = 4.710e-165 Identity = 344/809 (42.52%), Postives = 428/809 (52.90%), Query Frame = 2
Query: 1994 VSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKL--------------------LVDKTNRYVSLCTTEPAEGETDVRKDHQKAKKRTLGYHTLGDPA--------FEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEANPDYDTKHHIR-------------------------------RESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRT--------AGHKIAYFAV----------ISVFSSSLFRTLAGR------LLEEVLNKAWAENVDV----------------NQWLAYDEQMVKIVS-----TYAAALG-----RYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLPYEKRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 4075
VSLS A LP LD FM +P + +F L ++ C D+ FP++A KL + TN YV CTT P GE D RK HQ K TLG TLG+ + FE++HI GMIG+ IT G TKK RMRKHWSRS N PLV +CMPRD+FELLY FLHCSD NAP R LP+GE NPD D+K HIR + S ++ + R ++ V++ E G+ + F+ + D Y T A H I FAV + SL RT+ R +V WA++ D+ +W + IVS T A G R + +K+ A CD YCL SSVDGGM+G KLR + +CPL RTTR VL VLLG VL +K+DGSGV+IAMD++FT+P LFECLASHDIFAVGTCR+DRTAGA AYLESL RT+ RGDMNFCR+G++A V+W DSKD+ L STIH+AQP G++E GIDHF PLP R K R + QP MR DY M GVD ADQQNGS+ H HKS N+WRRV +EQ+LTN FL FR+WV +L E + + + + E L A EL +K+ERA DE MA LM C++ N GG+R A +P D VWGSV +K R C+NP C S GCSC + C G +G LMC TC+K SH AA A + + R R EW
Sbjct: 24 VSLSAEARAALPSLDNFMSHQNPTSGEFSLDLVLEKCLDLTFPQKARKLFWIRYVNYVLSCCDTHRFAFMCPVTNAYVKHCTTAPPPGEEDKRKPHQMKKSATLGRVTLGERSEERNTYGMFEEQHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCCFLHCSDPNAPERLLPDGEENPDDDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKMDCLLDRTTRHVLHVLLGECGVLRQKIDGSGV--FIAM------DNYFTSPTLFECLASHDI--FAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVAYVQWADSKDIFISTIHVAQPAKGKGGGRWNRPLQAFASIVSLNISLTTAGPFGLPVGGRSSVFYFMCASMKLLAACDITSYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVACVQWADSKDIFLISTIHVAQPAKGKEEAG---GIDHFKPLPLSLRAKGRNGE---PLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLIREVEAK--KPIAPGGELEELELASTELATLSKVERAVWDEQMATLLMAECNVARPNKGGKRPASDNKPAD-PVWGSVTLKSGRLCLNPTCKTTSMKGCSCKQFCTWGDKAGVLMCETCWKSPESHEQAAKAYWDSVSEGRNRTGFEW 813
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KMF5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF5_9PHAE) HSP 1 Score: 469 bits (1206), Expect = 1.070e-146 Identity = 265/590 (44.92%), Postives = 335/590 (56.78%), Query Frame = 2
Query: 2336 TRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEANPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQPGEKECARNEGIDHFTPLPYEKRKKD-----REDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPED-GRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 4075
T MRKHWS S N PLV E M RDLFELLYSRFLHCSD NAPPR+LP GE NP+YD+K HIR LE++LN AW+ENVD+ QWL YDEQMVK ST++ L + P K ITHG+K++A+CD GYCLI+S+DG +G LR +CPL +TTR VL VLL L KL GSGV+IAMD++FT+P LF CLASH+IFAVGTCRS RT GA Y++SL+RT GDM FCR+GEMAFV+W+DSK++ LCST+HI + GE+ I+HF P+P + K +E D QP MR DY YMGGVD ADQQN S+ H H+S N+WRRV I Q LTN+FL FR WV +L E ++ + + L EL R +K ER DE ++ LM RC++G++ GG+ ++R + G+VWGSV +K R CM+P C++R+ GC+C E C G G LMC+TCF + + AAA A +G RR MEW
Sbjct: 24 TWMRKHWSESAHDNYPLVREFMQRDLFELLYSRFLHCSDPNAPPRQLPTGEDNPEYDSKWHIRD-------------------------------------------------------------------------------LEKILNCAWSENVDLGQWLCYDEQMVKTASTFSKGLAHFNPAKPITHGMKLYAVCDRNGYCLINSIDGSFKGDPSLRSLEDCPLGKTTRHVLHVLLEECETLRGKLVGSGVFIAMDNYFTSPTLFACLASHEIFAVGTCRSPRTCGALPYIQSLERTTPNPGDMTFCRSGEMAFVQWRDSKEILLCSTVHIGETGEE----GGDINHFKPVPLALKGKGWAGKHKEHD--------QPVMRMDYVKYMGGVDRADQQNESHYHDHRSYTNHWRRVFDAKIMQMLTNNFLLFRMWVRLLMSEVDVLMDAHNTPFEEVQELADVKKELERLSKRERVDWDEELSEILMRRCNVGTIRKGGKVPRSSERQQPRGKVWGSVEIKSHRVCMDPACSKRTLKGCTCEEFCTFEGQRGVLMCKTCFLDKDRYAAAAEANWHGVDVLPRRSQMEW 522
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KVX6_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX6_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 2.630e-124 Identity = 217/444 (48.87%), Postives = 259/444 (58.33%), Query Frame = 2
Query: 1994 VSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKLLVDKTNRYVSLCTTEPAEGETDVRKDHQKAKKRTLGYHTLGDPA--------FEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEANPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKD 3301
VSLS A LP LD FM +P + +F L + C D+ FP++A KL +DKTN YV CTT P GE D RK HQ K TLG TLG+ + FE++H+ GMIG+ IT G TKK RMRKHWSRS N PLV + MPRD+FELLY RFLHCSD NAP R LP GE NPDYD+K LEE+LN AWA NV+ + WL+YDEQM+K VS Y++ + Y P K I HG+K+ A CD GYCL SSVDGGM+G KLR + +CPLDRTTR VL VLLG VL +K+DGSGV+IAMD++FT+P L ECLASHDIFAVGTCR+D TAGA YLESL RT+ RGDMNFCR+G++A V+W D
Sbjct: 24 VSLSAEARAALPSLDNFMSHQNPTSGEFSLDLALEKCLDLTFPQKARKLFLDKTNAYVKHCTTAPPPGEEDKRKPHQMKKSATLGRVTLGERSEERNTYGMFEEQHMDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKSMPRDVFELLYCRFLHCSDPNAPKRLLPAGEENPDYDSKE-----------------------------------------------------------------------------------LEEMLNTAWATNVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLDRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLLECLASHDIFAVGTCRADLTAGADTYLESLGRTIPNRGDMNFCRSGQVACVQWAD 384
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KNV0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV0_9PHAE) HSP 1 Score: 380 bits (976), Expect = 3.680e-111 Identity = 291/718 (40.53%), Postives = 380/718 (52.92%), Query Frame = 2
Query: 911 LALLAEALRVNIVVWEPSGVGRQVQVYSALGTRGLFLYEKKDRMDEEGDHWLHLFYHCIERPFVARVGVAPGGEAHAMHNHFDWLMLGAESQKAFARAMASGQEEV----VNHEALLGKTTEVRGSR----KRSRQP----GPLEKTNGGSSSKKPVPGRSPLTTGAKEKGKKSAVGGGGRGKLVPRKSAATKKPGGVQEKGKKQVAADGSENGKG-------------GSVLKKEKDVRYDSDGS------------------IGGGD--DFETRGAFACLTINKKKLVSDIAEIPETPYKRAFLTSSEKKALGRKLLHRANKIKAKKKAEADKKAAEAGRHKTGGKXXXXXXXXXXXXXXXXXXXXXXEIGEVSQ---DVQWTERGISNFAGTEAHKKRHLREPTAEVSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKLLVDKTNRYVSLCTTEPAEGETDVRKDHQKAKKRTLGYHTLGDPAFEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEA-NPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKI 2917
++LLA VNI++WEPS VQ YS T G+ L+EK+D+MDEEGDHW+HL Y P++AR + H + NHFD L LG ++ +F +AS + ++ + A+ E GS + P GPL + + S S GR GA++ K GK+ P+ +T+ PG Q + ++ GS G V KK+ + G+ GGGD +T GAFA ++ N+KKLV+ + +IPE YKRAF +++++ALG KL A++ KA++K ++ + +H+ G+ XXXXXXXXXXXXXXXXXXXX DV WT+RGI +FAGT+ HKKR RE + SLS SA ++LP LD FMD+LD E+ KFPL M+TCFDM FP+EA+ L VDKTN+YV+LCTT G D RK HQ K RTLG TL +PAFE KHIYGM+G+ IT G TKKTRMRKHWSRS + PLV ECM RDLFELLY RF+HCSDGNAPPR + NP++D+K HIR LE++LN AW EN+D NQWL YDEQMVK VST+A L R+ P+K ITHG+K+
Sbjct: 1 MSLLASEYGVNIILWEPSAKHGTVQAYSENNTAGMLLFEKEDKMDEEGDHWVHLLYREHANPWLAR------NQNHNL-NHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGGEEEDHPEFSMGPLPRGSNSSRSSSGTEGRQ---AGARKTKK---------GKVGPKVVGSTR-PGLRQGRSARRWLRRGSGXXXXXXXXXXXXXXXXMGEVPKKKSRLHRLVGGTPRRPTAKTTMPTMIPTAASGGGDVDHKQTPGAFATMSQNQKKLVTAMKKIPERGYKRAFWLTNKRRALGMKLKKIADEEKARRKKADERNKIQ--QHRPRGEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVWTDRGIPDFAGTDDHKKRTQRETVSAASLSASAREKLPSLDTFMDSLD-ESGKFPLHGSMMTCFDMMFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRE-------------------------------------------------------------------------------LEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGLKV 616
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KCK7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK7_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.470e-110 Identity = 203/403 (50.37%), Postives = 261/403 (64.76%), Query Frame = 2
Query: 2909 IKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GE-KECARNEGIDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAEC---KEGGDSGTLMCRTCFKKEASHTAAAVARVN 4036
+K++A+CD + YC +SSVDGGM G KLR WF+CPL RTTR VL VLLGA K+DGSGVYIAMD++FT+P LFECLASHDIFAVGTCRS+RT GA YL+SLDR VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP GE K+ + G DHF PLPY RK + + QP MRKDY A MGGV+TADQQN S+ H HKS N+WRRV+ E+ TN + F+++V +L+ +A +R++ + E+L + ELGR AK+ERA DE+++ LM RC++G N GGR A P+ +VWGS+ VK R CM+P C ++S GC+CAE K+ GD G LMC+ CF H A A+ N
Sbjct: 1 MKLFAICDIERYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVYIAMDNYFTSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVETADQQNVSHTHDHKSYTNHWRRVIEGKFERRFTNIVVMFKKYVSLLEDQANKRIKGGGLELEVVEKLDRVLVELGRLAKMERAVWDEMLSTELMARCNVGRPNKGGRPAAVTGAPD--KVWGSISVKTQRKCMHPGCKSKTSKGCACAELCVGKQAGDRGVLMCQACFNNPVKHARAGDAQRN 398
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE) HSP 1 Score: 364 bits (935), Expect = 3.660e-109 Identity = 200/400 (50.00%), Postives = 234/400 (58.50%), Query Frame = 2
Query: 2231 KKRTLGYHTLGDPA--------FEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEANPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLP 3400
K TLG TLG+ + FE++HI GMIG+ IT G TKK RMRKHWSRS N PLV +CM RD+FELLY RFLHCSD NAP R LP+GE NPDYD+K HIR LEE+LN AWA NV+ WL+YDEQM+K VS Y G+K+ A CD GYCL SSVDGGM+G KLR + +CPL RTTR VL VLLG VL +K+DGSGV+IAMD++FT+P LFECLASHDIFAVGTCR+DRTAGA AYLESL RT+ RGDMNFCR+G++A V+W DS D+ L STIH+AQP G++E GIDHF PLP
Sbjct: 3 KSATLGRVTLGERSEERNTYGMFEEQHIDGMIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRE-------------------------------------------------------------------------------LEEILNTAWATNVECGNWLSYDEQMIKTVSKYE-------------QGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVACVQWADSNDIFLISTIHVAQPVKGKEEAG---GIDHFKPLP 307
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5KJJ0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ0_9PHAE) HSP 1 Score: 354 bits (908), Expect = 1.990e-104 Identity = 210/454 (46.26%), Postives = 271/454 (59.69%), Query Frame = 2
Query: 2729 SSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLPYEK--RKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVMIEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 4075
++ LF A LEE+LN AWA NV+ + WL+YDEQM+K VS Y++ + Y P K I HG+K+ A CD GYCL SSVDGGM+G KLR + +CPL R TR VL VLLG VL +K+DGSGV+IAMD++FT+P +FECLAS+DIFAVGTCR+DRTAGA AYLESL RT+ RGDMN CR+G++A V+W DSK + L STIH AQP G++E GIDH PLP + KK + E E+ A + V+ A + CN + + T + L + + EA++ + + E L A EL +K+ERA DE MA LM +C++ N GGRR A +P D VWGSV +K R C+NP C RS+ GCSC + C G +SG MC TC+K SH AA A +G + R RK EW
Sbjct: 99 TAPLFHVRAVWELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRATRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTVFECLASYDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNLCRSGQVACVQWADSKGIFLISTIHFAQPAKGKEEAG---GIDHIKPLPLSEVEAKKPIAPGGELEEL----ELASTELATLSKVERAVWDEQKATLLMEKCN-------VARPNTVELL-------IREVEAKK----PIAPGGELEELELASTELATLSKVERAVWDEQMATLLMAKCNVARPNKGGRRPASDNKPAD-PVWGSVTLKSGRLCLNPTCKTRSTKGCSCEQFCTRGDESGVFMCETCWKSPESHEQAAKAYWDGLSKGRNRKGFEW 526
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Match: A0A6H5K2B4_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B4_9PHAE) HSP 1 Score: 339 bits (869), Expect = 2.460e-97 Identity = 291/784 (37.12%), Postives = 377/784 (48.09%), Query Frame = 2
Query: 839 ERTYKWLSASVERRVTQDWCDVTWLALLAEALRVNIV---VWEPSGVGRQVQVYSALGTRGLFLYEKKDRMDEEGDHWLHLFYHCIERPFVARVGVAPGGEAHAMHNHFDWLMLGAESQKAFARAMASGQEEV----VNHEALLGKTTEVRGSRKRSRQPGPLEKTNGGSSSKKPVPGRS------------PLTTGAKEKGK-------KSAVGG--GGRGKLVPRKSAATKKPG-----------------------------------GVQEKGKKQVAADGSENGKGGSVLKKEKDVRYDSDGSIGGGD--DFETRGAFACLTINKKKLVSDIAEIPETPYKRAFLTSSEKKALGRKLLHRANKIKA--KKKAEADKKAAEAGRHKTGGKXXXXXXXXXXXXXXXXXXXXXXEIGEVSQDVQWTERGISNFAGTEAHKKRHLREPTAEVSLSQSALDQLPLLDAFMDALDPETSKFPLQELMLTCFDMNFPEEAVKLLVDKTNRYVSLCTTEPAEGETDVRKDHQKAKK------------------------RTLGYHTLGDPAFEDKHIYGMIGLMITFGQTKKTRMRKHWSRSKEHNNPLVVECMPRDLFELLYSRFLHCSDGNAPPRKLPNGEA-NPDYDTKHHIRRESHQIAACMRRAPCSIVSVVIFESK*SFHNFGGTHIRTFVVVRLSLWIDTYRTAGHKIAYFAVISVFSSSLFRTLAGRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIK 2914
E+T +W + V W D+TW++ LA VNI W ++Q YS T G+FL+EK+D+MDEEGDHW+HL Y P++AR + H + NHFD L LG ++ +F +AS + ++ + A+ E GS R E+ + S P+P S K+KGK K G + KL R ++ K G G ++KGK NGK + + YDSDGSIGG D +T GAFA ++ N+K+LV+ + ++PE YKRAF +++++AL KL A++ KA KK E +K XXXXXXXXXX XXXXXXXXXXX DV WT+RGI +FA T+ HKKR RE + SLS SA ++LP +D FMD+LD E+ KFPL LM+ C DM FP+EAV DKTN+YV+LCTT P G D RK HQ RTLG TL +PAF KHIYGM+G+ IT G TKKTR+RKHWSRS + PLV ECM RDLFELLY RF+HCSDGNAPP + NP++D+K HIR LE++LN AW +N+D NQWL+YDEQMVK VST+A L R+ P+K ITHG+K
Sbjct: 5 EKTVRWFCDLAWQSVK--WVDITWMSFLASEYGVNITGCPSWS------RIQTYSGNNTAGMFLFEKEDKMDEEGDHWVHLLYREHANPWLAR------NQNHNL-NHFDRLQLGHDAVASFVEVVASAKLQLGTVTLMPSAIYTAGGEAGGSSMVGR-----EEEDHPEFSIAPLPRSSNSXXXXXXXXXXXXXXRKKKKGKIGPKVVVKRPTAGQTAEKKKLKGRDASGKHKAGVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGAKKKGKTTPTGGRKANGK-------DDNANYDSDGSIGGWDVDHKQTPGAFATMSQNQKRLVTAM-KVPERGYKRAFWLTNKRRALDMKLKKIADEEKARLKKADERKEKKQHXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXDVVWTDRGIPDFAETDYHKKRDQREAVSAASLSASAREKLPSVDTFMDSLD-ESGKFPLHGLMMMCLDMMFPDEAV----DKTNKYVNLCTTPPLPGAKDARKAHQXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTLGMVTLPEPAFARKHIYGMLGITITMGFTKKTRIRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPHWTGEDKTPNPEFDSKWHIRE-------------------------------------------------------------------------------LEDILNNAWTDNMDFNQWLSYDEQMVKTVSTFANYLMRHSPKKPITHGLK 676 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig630.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig630.11.2 >prot_P-littoralis_Contig630.11.2 ID=prot_P-littoralis_Contig630.11.2|Name=mRNA_P-littoralis_Contig630.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=772bp MRFFFFTLLVVVFGPRPMSAAVDSQGHVPVTGVGTAPREQLPRSAVLGREback to top mRNA from alignment at P-littoralis_Contig630:140015..148019+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig630.11.2 ID=mRNA_P-littoralis_Contig630.11.2|Name=mRNA_P-littoralis_Contig630.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8005bp|location=Sequence derived from alignment at P-littoralis_Contig630:140015..148019+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig630:140015..148019+ >mRNA_P-littoralis_Contig630.11.2 ID=mRNA_P-littoralis_Contig630.11.2|Name=mRNA_P-littoralis_Contig630.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2316bp|location=Sequence derived from alignment at P-littoralis_Contig630:140015..148019+ (Pylaiella littoralis U1_48)back to top |