prot_P-littoralis_Contig630.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig630.1.1
Unique Nameprot_P-littoralis_Contig630.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length327
Homology
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.430e-24
Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   32 TCVSLLGLLGLAKAQPTSCAASLTTLNVSSMLGALELNDALN-CSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWS-ENGGAVLTNFSRLAATD 160
            TCVSLL ++GLAK+Q +SC+  +TTLNVS+   ALEL+D+LN C+G G FEVNW G VLL+QTITV +  ++ V G G + A I+GG A+ LF V  GS L L+ VSL+ G   E+GG  L   S L A +
Sbjct:    7 TCVSLLSIVGLAKSQ-SSCSEGITTLNVSTTAEALELSDSLNNCAGSGEFEVNWSGNVLLSQTITVQNRTALTVRGVGAEAAVIDGGDAISLFHVFNGSVLMLDGVSLIGGSGVESGGVGLCCSSTLLAAN 136          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: A0A6H5KRZ0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.490e-23
Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 0
Query:   50 CAASLTTLNVSSMLGALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVLTNFSRLAATDCLFANNVANMS 171
            CA  +T L+VSS   ALEL + L CSG G FEV W GEV++T+T  VS+G S+K++G+  D A I+GGGAV LF VN+GS LEL+ VS+V  +   G AV  + S++ ATDC F++N  + S
Sbjct:   38 CADGVTALSVSSTAEALELTNELECSGAGDFEVEWSGEVVVTKTFAVSTGTSLKITGSIFDGAVIDGGGAVQLFVVNDGSQLELDSVSVVRSF---GTAVDASESQVTATDCTFSSNNGSSS 156          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.460e-20
Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 0
Query:   26 MWQLFLTCVSLLGLLGLAKAQPTSCAASLTTLNVSSMLGALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSE--------NGGAVLTNFSR--LAATDCLFANNVA 168
            MW L+ +  +LLG++G+  AQ  +C+ ++    VS+   A EL++AL CSG G FEV W GEVLL + I +S+G  VKV+GA    A I+GG AV LF VN+GSTLEL+ +SLV G +          GGAV+       L A+ C F  N A
Sbjct:    1 MW-LYASLAALLGMVGMPHAQAATCSVAVDARVVSTTEEASELSEALLCSGAGEFEVEWQGEVLLERPIFISNGSYVKVTGASAGEAVIDGGDAVVLFNVNDGSTLELDALSLVRGVATYTATYSYGGGGAVILRSDDCILTASSCSFIGNNA 152          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.420e-13
Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   64 GALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVLTNFSRLAATDCLFANNVA 168
            GAL L +A++CS  G+FEV+WVG V + QTI V  G  + + G     + ++G G VGLFEVN G+ L+L+ +SLV+G S  GG++  + S ++ ++C+F  N A
Sbjct:   41 GALGLAEAVDCSD-GTFEVSWVGNVAVEQTIRVPDGTFLSIVGLPDGSSTVDGAGEVGLFEVNRGA-LQLSGLSLVNGTSAVGGSIFASDSVVSVSECVFTGNAA 143          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: A0A6H5JRC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC8_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 5.160e-8
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   23 ARRMWQLFLTCVSLLGLLGLAKAQPTSCAASLTTLNVSSMLGALEL--NDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGA 119
            AR    +  TCVSLL ++ LAK+Q +SC+  + TL VS+      L       C+G G FEVNW G VLL+Q ITV +   + V G G + A I+ G A
Sbjct:   10 ARATSTVLNTCVSLLSIVELAKSQ-SSCSEGIITLPVSTTAKDWNLATRSTTACTGSGEFEVNWSGNVLLSQIITVQNRTVLTVRGVGAEAAVIDEGDA 107          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 3.190e-7
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   65 ALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVLTNFSRLAATDCLFANNVAN 169
            AL L  A+NCSG GSFEV WVG V++ +TI V+ G  + ++GA    A ++G     LF V   + L ++ ++L  G S +GGA+    S L      F  NVA+
Sbjct:  233 ALALALAVNCSG-GSFEVEWVGTVVVNETIFVTDGTVLTITGAAGSNAALDGNSVTRLFTVVN-AALHVSGINLSHGASISGGAIAAGGSTLTFNQTNFIGNVAS 335          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 5.280e-7
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 0
Query:   50 CAASLTTLNVSSMLGALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVLTNFSRLAAT-DCLFANNVANMS 171
            C     +L V S     +L   LNCS  G F V WVG+V +T+TI ++SG S+ ++G G   A  +G     LF V+ GS L L+ ++L  G +  GGA+    S ++ + + +F++N A+ S
Sbjct:   24 CTLDTGSLTVGSSEDVADLIGFLNCSN-GDFSVEWVGDVFVTETIRITSGTSLNITGDGPG-AIADGQNITQLFYVDGGSKLRLSDMTLAHGNASEGGAIYVTQSIVSFSGNIVFSSNYADTS 144          
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.240e-6
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 0
Query:   39 LLGLAKAQPT-SCAASLTTLNVSSMLGALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGISVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVLTNFSRLAATDCL-FANNVA 168
            L+ +A AQ T  C+   +   V+S   A+ L   L CS  G F V WVGEV++T+TI V++G S+ ++G G   A  NG     LF V  GS++    ++  +G + +GGA+    S +  +    F  NVA
Sbjct:   64 LVAVATAQATLPCSLDTSLWTVASSEDAVTLATLLRCSD-GDFAVQWVGEVIVTETIRVTNGTSLNITGDGSG-ATANGDHTTQLFVVEGGSSMHCTDMTFANGNASSGGAMFVGESSVRFSGATAFTGNVA 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig630.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPF6_ECTSI5.430e-2452.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRZ0_9PHAE1.490e-2350.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JWI3_9PHAE1.460e-2044.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNY1_ECTSI4.420e-1342.86Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5JRC8_9PHAE5.160e-842.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC0_ECTSI3.190e-739.05Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5J7J9_9PHAE5.280e-734.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI1.240e-634.85Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 63..325
e-value: 1.0E-11
score: 46.3
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 237..254
e-value: 0.064
score: 13.8
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 185..203
e-value: 1.1E-4
score: 19.9
coord: 236..261
e-value: 2.9E-6
score: 24.9
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 200..253
coord: 257..327
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 48..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig630contigP-littoralis_Contig630:13748..68957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig630.1.1mRNA_P-littoralis_Contig630.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig630 13748..68958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig630.1.1 ID=prot_P-littoralis_Contig630.1.1|Name=mRNA_P-littoralis_Contig630.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
QPPDNTTLPPEMPTTSCSCDVPARRMWQLFLTCVSLLGLLGLAKAQPTSC
AASLTTLNVSSMLGALELNDALNCSGPGSFEVNWVGEVLLTQTITVSSGI
SVKVSGAGVDVAEINGGGAVGLFEVNEGSTLELNRVSLVDGWSENGGAVL
TNFSRLAATDCLFANNVANMSGGVIYSYYGEITIQNTTFHENTAGENGGA
ISSYSGEITIQDTTFHENTAGEGGAISSYSREITIQDTTFHDNTAALYGG
AIYSYGEITIQDTTFHENTAAIYGGAIISYSGEITIQNTTFHENTAGGGG
GVIHSYSREITIQDTTFHENTAGEDGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence