prot_P-littoralis_Contig63.85.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig63.85.3
Unique Nameprot_P-littoralis_Contig63.85.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length986
Homology
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A6H5JFI3_9PHAE (Plus3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI3_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 1.560e-165
Identity = 281/388 (72.42%), Postives = 302/388 (77.84%), Query Frame = 0
Query:  599 VLEDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWKMGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNSPPRPXXXXXXXXXDGDGTEEKTAAAVGXNXAANGXXXEGAKAAPAAALVEPVAPAGGQPEGEGGLQSMHSSFGGVDIMEAGRLALEKRMNAVKTKAASR-QGGKLTLDKYLEKARVDA 985
            VLEDINRCRVPR+YLERWANEPYFEKAVQGCFVRVARGVGR GER+YVMAEIVGV  YKR+YKIGN+YT KCL+IS+S++Q RDQCMDIVSNSRIS+ EYTRWK GRKG   PTLTVSECNARR+RMNKIV+GHRYSVEEVS MVKQR+ EGVA+KN ALSR KL+NSLEAA+AEGREDEADFCREQLAKLDEREAQ KKSLDSGAAGMRALNERNKTFN+ TDTHVGRKKRLAEAKAR ASAAGDEGDFDPFKRRSCRP+IL                                                       V   A  GG   GE GLQ MHS FGGVD+MEAGR+ALEKR+NAVKTKAA R +GGKLTL KYLEKARVDA
Sbjct:  539 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKIGNSYTHKCLKISASSSQVRDQCMDIVSNSRISEAEYTRWKDGRKGAKVPTLTVSECNARRVRMNKIVKGHRYSVEEVSAMVKQRESEGVAFKNIALSRDKLTNSLEAAVAEGREDEADFCREQLAKLDEREAQKKKSLDSGAAGMRALNERNKTFNIRTDTHVGRKKRLAEAKARVASAAGDEGDFDPFKRRSCRPQIL------------------------------------------------------CVATGAAGGGHGVGESGLQDMHS-FGGVDVMEAGRVALEKRVNAVKTKAAPRGEGGKLTLGKYLEKARVDA 871          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: D8LLT9_ECTSI (Plus3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT9_ECTSI)

HSP 1 Score: 487 bits (1253), Expect = 7.050e-159
Identity = 243/274 (88.69%), Postives = 257/274 (93.80%), Query Frame = 0
Query:  599 VLEDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWKMGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNSPPRP 872
            VLEDINRCRVPR+YLERWANEPYFEKAVQGCFVRVARGVGR GER+YVMAEIVGV  YKR+YKIGN+YT KCL+IS+S++Q RDQCMDIVSNSRIS+GEYTRWK GRKG   PTLTVSECNARR+RMNKIVQGHRYS EEVS MVKQRQ EGVA+ N ALSR+KL NSLEAA+AEGREDEADFCREQLAKLDEREAQ KKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQ+SP RP
Sbjct:  239 VLEDINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGERVYVMAEIVGVGPYKRKYKIGNSYTQKCLKISASSSQVRDQCMDIVSNSRISEGEYTRWKDGRKGAKVPTLTVSECNARRVRMNKIVQGHRYSAEEVSAMVKQRQSEGVAFTNVALSRMKLDNSLEAAVAEGREDEADFCREQLAKLDEREAQKKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQHSPTRP 512          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A836CH32_9STRA (Plus-3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH32_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.310e-35
Identity = 113/353 (32.01%), Postives = 163/353 (46.18%), Query Frame = 0
Query:  600 LEDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVM--------------AEIVGVAKYKRRYKI-GNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWKMGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFC--------------------------------------------------REQLAKLDEREAQTKKSLDSGAA----------------GMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNSPPR 871
            L DIN CRVPRE LE+W NEP+F++A++GCFV++  G+ R  + +Y M               E+ GV KYKR+Y + G   T K L +   +A+ RD  MD +SN RI++GE+  W+           T  EC AR  R    V  H+Y+VE V+ MVK+  ++G    + AL+++KL  ++ AA+    ++EAD                                                    R+ LAKL+E EA+ K  ++                     MR+LN RN+  N+  D         A A+ R++   G     DPF RR+CRPKILW+VG  SP R
Sbjct:  451 LNDINMCRVPRENLEKWLNEPFFDEALKGCFVKLGVGM-RNNQAVYRMLRXXXXXXXXXXXXCEVEGVTKYKRQYTMPGGMPTTKALTLRFGSAK-RDFRMDTISNHRITEGEFRAWRQACAKDRVKVPTPQECQARYARAKNAVTRHQYTVEHVAEMVKRNAEQGRVLSSAALAKLKLERAIGAAVMRLEKEEADLAAAXXXXXXXXXXXXXXXXXXXXMASRGGALRELEEAQEKHLAASAEVDQLRDDLAKLEEEEARKKARMEDAQGRAIXXXXXXXXXXXXXXMRSLNARNRGANIAIDA--------ATARRRQSQENGQAKTSDPFARRACRPKILWAVG-TSPTR 792          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: UPI000718DE26 (RNA polymerase-associated protein RTF1 homolog n=3 Tax=Polistes TaxID=7456 RepID=UPI000718DE26)

HSP 1 Score: 111 bits (277), Expect = 2.450e-21
Identity = 75/272 (27.57%), Postives = 144/272 (52.94%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNSPP 870
            +++N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G T T K L++    AQ R   ++ VSN   ++ E+++WK     +G++ PT    E   + IR   +   + +  E++ ++VK+++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +     D     PF RRS +P++++   +   P
Sbjct:  348 DELNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNNGKAVYRVAEISGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTESEFSKWKETCALQGISMPTFDEVEQKLKDIREALV---YEFKEEDIEKIVKEKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEEIKANKGKKVDD-----PFTRRSTKPRMVYKPDEEDAP 605          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A6V7L0U0_9HYME (Plus3 domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7L0U0_9HYME)

HSP 1 Score: 109 bits (272), Expect = 4.790e-21
Identity = 77/268 (28.73%), Postives = 144/268 (53.73%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYK----NTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILW 862
            E++N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G+T T K LR+    AQ +   ++ VSN   +  E+ +WK     +G++ PT    E   + I   K    + Y  E+V ++VK++    + +K    N A+ + +L    +AA   G ++ A    ++L++L+ER +Q  K+  +  + +  +N+RN+  N+          +  +A   E  A+  +   DPF RRS +P++++
Sbjct:  230 EELNKVRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNAGKAVYRVAEISGVCETAKIYQLGSTRTNKGLRLRHG-AQEKVFRLEFVSNQDFTDTEFFKWKETCALQGISMPTFDELEQKVKEI---KDAIAYEYKEEDVEKIVKEK----IRFKQNPFNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASQLDKTRTATISTISFINDRNRKKNIE---------QAEKAIMEEYKASKGQKIDDPFTRRSTKPRMVY 479          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A158NBM0_ATTCE (Plus3 domain-containing protein n=30 Tax=Formicidae TaxID=36668 RepID=A0A158NBM0_ATTCE)

HSP 1 Score: 108 bits (270), Expect = 1.720e-20
Identity = 75/270 (27.78%), Postives = 141/270 (52.22%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNS 868
            ED+N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G T T K L++    AQ R   ++ VSN   +  E+ +WK     +G++ PT    E   + I+   +   + +  E++ ++V++++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +     D     PF RRS +P++++     S
Sbjct:  349 EDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNNGKPVYRVAEISGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTDSEFFKWKETCALQGISTPTFDEVEQKLKDIKEALV---YEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEELKANKGKKVDD-----PFTRRSTKPRMVYKPEDES 604          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: UPI000626C04E (RNA polymerase-associated protein Rtf1 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI000626C04E)

HSP 1 Score: 108 bits (270), Expect = 1.730e-20
Identity = 77/264 (29.17%), Postives = 144/264 (54.55%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILW 862
            ED+N+ R+ R  +ER+ + P+FE+ VQGCFVR+  G    G+ +Y +AE+ GV +  + Y++G T T K L++    AQ R   ++ VSN   ++ E+ +WK     +G++ PT    E   + IR   +   + +  E++ ++V++++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +    G + D DPF RRS +P++++
Sbjct:  349 EDLNKIRLSRHKMERFVHLPFFERIVQGCFVRIGIG-NNNGKPVYRVAEVSGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTESEFFKWKETCALQGISMPTFEELEQKLKDIREAVV---YEFKEEDIEKIVREKERFKQNPYNYAMKKAQLMRDRDAANCRGDDELASQLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEEIKANK----GKQID-DPFTRRSTKPRMVY 598          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A834JFI3_VESGE (Plus3 domain-containing protein n=11 Tax=Hymenoptera TaxID=7399 RepID=A0A834JFI3_VESGE)

HSP 1 Score: 108 bits (269), Expect = 2.270e-20
Identity = 74/272 (27.21%), Postives = 142/272 (52.21%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNSPP 870
            E++N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G T T K L++    AQ R   ++ VSN   ++ E+ +WK     +G++ PT    E   + I+   +   + +  E++ ++V++++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +     D     PF RRS +P++++       P
Sbjct:  347 EELNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNNGKAVYRVAEISGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTESEFFKWKETCALQGISMPTFDEVEQKLKDIKEALV---YEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEEIKANKGKKVDD-----PFTRRSTKPRMVYKPDDEDTP 604          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: UPI000EAB47C5 (RNA polymerase-associated protein RTF1 homolog n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB47C5)

HSP 1 Score: 108 bits (270), Expect = 2.850e-20
Identity = 74/264 (28.03%), Postives = 141/264 (53.41%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILW 862
            ED+N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G T T K L++    AQ R   ++ VSN   ++ E+ +WK     +G++ PT    E   + I+   +   + +  E++ ++V++++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +     D     PF RRS +P++++
Sbjct:  691 EDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNNGKPVYRVAEISGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTESEFFKWKETCALQGISMPTFEEVEQKLKDIKEALV---YEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEEIKANKGKKVDD-----PFTRRSTKPRMVY 940          
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Match: A0A836FSN7_9HYME (RTF1 protein (Fragment) n=1 Tax=Acromyrmex heyeri TaxID=230685 RepID=A0A836FSN7_9HYME)

HSP 1 Score: 108 bits (270), Expect = 2.950e-20
Identity = 75/270 (27.78%), Postives = 141/270 (52.22%), Query Frame = 0
Query:  601 EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEIVGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTRWK--MGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEGVAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSLDSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDPFKRRSCRPKILWSVGQNS 868
            ED+N+ R+ R  +ER+ + P+F++ VQGCFVR+  G    G+ +Y +AEI GV +  + Y++G T T K L++    AQ R   ++ VSN   +  E+ +WK     +G++ PT    E   + I+   +   + +  E++ ++V++++       N A+ + +L    +AA   G ++ A    ++L++L+ER ++  K   +  + +  +N+RN+  NV        K  + E KA +     D     PF RRS +P++++     S
Sbjct:  737 EDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIG-NNNGKPVYRVAEISGVCETGKIYQLGGTRTNKGLKLRHG-AQERVFRLEFVSNQEFTDSEFFKWKETCALQGISTPTFDEVEQKLKDIKEALV---YEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEE----AEKAIMEELKANKGKKVDD-----PFTRRSTKPRMVYKPEDES 992          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.85.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI3_9PHAE1.560e-16572.42Plus3 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLT9_ECTSI7.050e-15988.69Plus3 domain-containing protein (Fragment) n=1 Tax... [more]
A0A836CH32_9STRA6.310e-3532.01Plus-3 domain-containing protein n=1 Tax=Tribonema... [more]
UPI000718DE262.450e-2127.57RNA polymerase-associated protein RTF1 homolog n=3... [more]
A0A6V7L0U0_9HYME4.790e-2128.73Plus3 domain-containing protein (Fragment) n=1 Tax... [more]
A0A158NBM0_ATTCE1.720e-2027.78Plus3 domain-containing protein n=30 Tax=Formicida... [more]
UPI000626C04E1.730e-2029.17RNA polymerase-associated protein Rtf1 n=1 Tax=Oru... [more]
A0A834JFI3_VESGE2.270e-2027.21Plus3 domain-containing protein n=11 Tax=Hymenopte... [more]
UPI000EAB47C52.850e-2028.03RNA polymerase-associated protein RTF1 homolog n=1... [more]
A0A836FSN7_9HYME2.950e-2027.78RTF1 protein (Fragment) n=1 Tax=Acromyrmex heyeri ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 978..985
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableCOILSCoilCoilcoord: 772..792
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 550..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 919..938
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..597
NoneNo IPR availablePANTHERPTHR13115UNCHARACTERIZEDcoord: 82..334
NoneNo IPR availablePANTHERPTHR13115:SF8RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOGcoord: 370..923
NoneNo IPR availablePANTHERPTHR13115:SF8RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOGcoord: 82..334
NoneNo IPR availablePANTHERPTHR13115UNCHARACTERIZEDcoord: 370..923
IPR004343Plus-3 domainSMARTSM00719rtf1coord: 597..705
e-value: 2.2E-16
score: 70.4
IPR004343Plus-3 domainPFAMPF03126Plus-3coord: 602..702
e-value: 1.9E-25
score: 89.5
IPR004343Plus-3 domainPROSITEPS51360PLUS3coord: 597..730
score: 24.001396
IPR036128Plus3-like superfamilyGENE3D3.90.70.200coord: 596..727
e-value: 1.6E-26
score: 94.7
IPR036128Plus3-like superfamilySUPERFAMILY159042Plus3-likecoord: 599..728

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:417680..432698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.85.3mRNA_P-littoralis_Contig63.85.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig63 416352..432969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig63.85.3 ID=prot_P-littoralis_Contig63.85.3|Name=mRNA_P-littoralis_Contig63.85.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=986bp
MSSMRLGMKRSMSGPGNSGDEAGEGAATVGATAVAAPPPAAKKKKSTTPK
PARAKTPQKPKNKTPRKKKAAGPAGGGKASTPKRRKISADGEGGEIGGDA
GSGISDDDSDDDEPPAAAAARKAAKGKQQQQQQQRRVNAAVEEDEEDSDS
DGEVEDLDDGYGSDLMGEGEDRDAILALPEVERERILFERLEKREQHKDQ
VALRKRVQKSKARTGGGSSAGAGGASGGEVSAAAVQKRKEAQAARAATVA
ARAAALENDDSSGQSDESDDDRADDDEEDEDGAIEQATGSAGAGGAGGGA
GDHDGENEDSDDSDDEPPQRRPAAAAAGVVGSSAAAEEDEENSDDDDMGQ
QQQQQQQQQAQQPQQQPQQQQEDSDDDDDDDDDDDAPVRGGTARVKGRGK
RSAVTEESDDSDDGGGSGGDGGDGDGDGDRAQQGRRRGSSDDDDDDDDRY
DDRKSKRSRGGDDGDRRGDRQSSRRNRRSRSRSRDRDDSDSDSDGSYESR
RRRRRSSNGATGGGGGSSSAGDRYGGSSSKRRSSRSRSRSRDRDRDHRRS
SRRSRSRSRSRSRSRSRSRSRSPGGGRGRGGGSSRPREAERAAPEPEPVL
EDINRCRVPREYLERWANEPYFEKAVQGCFVRVARGVGRGGERLYVMAEI
VGVAKYKRRYKIGNTYTAKCLRISSSTAQARDQCMDIVSNSRISKGEYTR
WKMGRKGVNAPTLTVSECNARRIRMNKIVQGHRYSVEEVSRMVKQRQDEG
VAYKNTALSRIKLSNSLEAAIAEGREDEADFCREQLAKLDEREAQTKKSL
DSGAAGMRALNERNKTFNVHTDTHVGRKKRLAEAKAREASAAGDEGDFDP
FKRRSCRPKILWSVGQNSPPRPPAGGGGGAADGDGTEEKTAAAVGGNGAA
NGAGGEGAKAAPAAALVEPVAPAGGQPEGEGGLQSMHSSFGGVDIMEAGR
LALEKRMNAVKTKAASRQGGKLTLDKYLEKARVDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004343Plus-3_dom
IPR036128Plus3-like_sf