mRNA_P-littoralis_Contig63.82.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig63.82.1
Unique NamemRNA_P-littoralis_Contig63.82.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: D7FI51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI51_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 2.360e-143
Identity = 236/327 (72.17%), Postives = 251/327 (76.76%), Query Frame = 3 
Query:   63 LALVVLPVGAKGFAPSLVHPARRSS-------VPETT---------QH-HETRPRSRGPRPAPSLLRRTSPSLSAASAAAASPSSPAEYIMALFGVNKGESAKTGGKGKALEAELLSAIDGVQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQRPP 992
            L L+ LP+G +GF PSL + A  ++        P TT         QH H     S   R  P+   R +P         ASP+S  EY MALFG NKG SA    K + LEA+LLSAI GVQGRGRDVT EQR LVDKAVEALE  GG P+ ASSPLVDGSWRLIFTTTPGTASPVQRSFV VDGFAIYQDIDLFSE  PPTVTNVVDFG +VGQLRVTALASTPSRPMEGFVPR+GDGRFFGLNILGVSQTTPP+   DPS RIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQRPP
Sbjct:    9 LVLLGLPLGIQGFVPSLANNAAGANNGAATTPTPGTTAAATGCRRWQHEHRIASGSSSCRAPPAHAHRAAPR-------PASPASLPEYFMALFGGNKGSSATRASKAEELEADLLSAIKGVQGRGRDVTQEQRELVDKAVEALESDGGAPNAASSPLVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSE-VPPTVTNVVDFGPRVGQLRVTALASTPSRPMEGFVPRKGDGRFFGLNILGVSQTTPPE---DPSRRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQRPP 324
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A835Z824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z824_9STRA)

HSP 1 Score: 269 bits (688), Expect = 3.650e-84
Identity = 129/208 (62.02%), Postives = 153/208 (73.56%), Query Frame = 3 
Query:  375 VQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSER----LRIARGNKGTLFVLQR 986
            + GRG+ V   Q+  VD  +  LE  GGVPD A +  +DG WRL++T+TPGTASP+QRSFV VD F+IYQ+I L+   AP TV NVVDFG +VG+L V ALAST  RP++GFVPRRGDGR  GLN+ GVSQT        P  RIDF+FD+AGFD + LPF IPYPVPFR+ GDEVKGWID+TYLS +    LRIARGNKGT FVL R
Sbjct:    1 MSGRGKGVEGAQKERVDSLIAELEASGGVPDGACADSIDGVWRLLYTSTPGTASPIQRSFVSVDAFSIYQNIALYGADAPATVANVVDFGARVGRLEVAALASTARRPLDGFVPRRGDGRILGLNVFGVSQTAEEGAPRRPGARIDFKFDDAGFDLKLLPFRIPYPVPFRILGDEVKGWIDITYLSRQPEGGLRIARGNKGTTFVLVR 208
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A4D9CNY0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNY0_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.400e-73
Identity = 119/217 (54.84%), Postives = 153/217 (70.51%), Query Frame = 3 
Query:  345 EAELLSAIDGVQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLF---SEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQR 986
            E  LL AI G+  R    + + +  V   ++ LE   G+P   ++  ++G WRL++T++  TASP+Q +FV    FA+YQDID+    S  AP TVTN+VDFG  +G L V ALASTP+RP+  F PR GDGRFFGLNILG+S+T  P+ S DP  RIDF+FD AGFD   LPF IPYPVPFRL  DEVKGW++VTYLS RLR++RGNKGT+FVL++
Sbjct:   63 ENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQDIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPARPIPNFAPRLGDGRFFGLNILGISKTEVPRDS-DPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEK 278
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A6V1SXP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SXP2_HETAK)

HSP 1 Score: 239 bits (611), Expect = 1.020e-71
Identity = 125/212 (58.96%), Postives = 150/212 (70.75%), Query Frame = 3 
Query:  351 ELLSAIDGVQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQR 986
            E L+A+   +G G D    +R  V + V  LE   G+PD A  P ++G WRL+ TTTPGTASP+QRSFV    F+++QDIDL +    PTV NVV+FG+ +G L V ALAST +RP+ GFVPRRGDG+  GLNI GVS T PP    +P  RIDF+FD A FDF  LPF IPYPVPFR  GDEV GWID+TYLSE LRIARGNKGT F+LQ+
Sbjct:   70 ETLAALTR-RGAGADAAAAER--VAEQVAVLERTQGIPDPADYPGLNGRWRLLHTTTPGTASPIQRSFVGAAAFSVFQDIDL-ARPDRPTVANVVEFGS-LGVLTVEALASTAARPLPGFVPRRGDGKILGLNIFGVSSTEPP---ANPKQRIDFKFDYAAFDFNFLPFAIPYPVPFRYLGDEVTGWIDITYLSESLRIARGNKGTTFILQK 273
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A2P6TS10_CHLSO (Putative plastid-lipid-associated chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TS10_CHLSO)

HSP 1 Score: 249 bits (635), Expect = 3.780e-68
Identity = 133/229 (58.08%), Postives = 157/229 (68.56%), Query Frame = 3 
Query:  309 ESAKTGGKGKALEAELLSAIDGVQGRGRD-VTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSE--RLRIARGNKGTLFVLQR 986
            ++AK   K +  +  +L AI  VQGRG+  +TPEQ++  D AV  LE  GG+     SPL+DG WRL+FTT PGT+SP+QR+F  VD F IYQDIDL  EQ  P V  VVDFG  VG LRV A AST SRP+ GF PRRG+G  FG  I+G S + PP     P  R+DFQFD A F F ALPF +PYPVPFRL GDE KGWIDVTYLS   +LR+ RGNKGTLFVL +
Sbjct:  838 QAAKPSRKVERAQQAVLDAIADVQGRGKGGMTPEQQAAFDAAVAVLEADGGMAAPTDSPLLDGRWRLLFTTRPGTSSPIQRTFTAVDSFKIYQDIDLAGEQ--PRVCQVVDFGKNVGYLRVEAEASTDSRPLAGFTPRRGEGLPFG--IMGRSSSEPP---ARPGLRVDFQFDRAAFTFNALPFKVPYPVPFRLLGDEAKGWIDVTYLSPDGKLRLTRGNKGTLFVLAK 1059
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A2P6VFQ7_9CHLO (Putative plastid-lipid-associated chloroplastic isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFQ7_9CHLO)

HSP 1 Score: 234 bits (597), Expect = 1.970e-67
Identity = 123/214 (57.48%), Postives = 150/214 (70.09%), Query Frame = 3 
Query:  354 LLSAIDGVQGRGRD-VTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSE--RLRIARGNKGTLFVLQR 986
            LL  I GV+GRG+  +TPEQ++  D+AV  LE  GGV    +SPL+DG W L+FT+ PGTASP+QR+F  VD  ++YQDI++  E     V+ VVDFG+ VG LRV A A+T SRP+ GF PR G G  FG  I+G S T PP     P  R+ FQFD A F  +ALPF IPYPVPF+L GDE KGWIDVTYLS   RLR++RGNKGTLFVLQ+
Sbjct:   79 LLGVIAGVEGRGKGGLTPEQQAAFDEAVAILEADGGVEAPTTSPLLDGRWALLFTSRPGTASPIQRTFTAVDSVSVYQDIEVGDECEQARVSQVVDFGSAVGFLRVEAEANTDSRPLPGFTPRVGQGLPFG--IMGKSSTGPP---ARPDMRVGFQFDRAAFTLKALPFKIPYPVPFKLLGDERKGWIDVTYLSPDGRLRLSRGNKGTLFVLQK 287
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A5J4YBD5_9CHLO (Putative plastid-lipid-associated chloroplastic-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBD5_9CHLO)

HSP 1 Score: 233 bits (594), Expect = 3.860e-67
Identity = 123/222 (55.41%), Postives = 151/222 (68.02%), Query Frame = 3 
Query:  336 KALEAELLSAIDGVQGRGRD-VTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSE--RLRIARGNKGTLFVLQRPP 992
            K     LL AI  V+GRG+  ++PEQ S ++ AVE+LE   GV D   SPL++G WRL+FTT PG+ASP+Q++FV VD F +YQD+ L S      V N+VDFG KVG L+V A AST S    GFVPR+  G    L + G S  TPP     P+ R+DFQFD+A F F ALPF IPYPVPF+L GDE KGWIDVTYLS+  +LR+ RGNKGTLFVL + P
Sbjct:   61 KEARESLLGAITDVKGRGKSGMSPEQLSKLEAAVESLEADRGVSDPTKSPLLEGRWRLLFTTRPGSASPIQKTFVGVDAFTVYQDV-LLSSAEKVRVNNIVDFGAKVGTLKVEAEASTDSNTRPGFVPRQKPG----LAVFGKSSNTPP---VHPNMRVDFQFDKAAFAFSALPFKIPYPVPFKLLGDETKGWIDVTYLSQDGKLRLTRGNKGTLFVLLKDP 274
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A5B8MHL9_9CHLO (Plastid lipid-associated fibrillin n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHL9_9CHLO)

HSP 1 Score: 228 bits (582), Expect = 8.030e-66
Identity = 119/224 (53.12%), Postives = 149/224 (66.52%), Query Frame = 3 
Query:  315 AKTGGKGKALEAELLSAIDGVQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQR 986
            A T GK  A +    +  +G   R   + PE + ++D+ V  LEE GGV D  +S L++G W+L+FTT PGT+SP+QR+F  ++ F+IYQDIDL  E   P V NVV FG  VG L+V A A T  RP  GFVPRRG G    L  LG S +TPP     P+ RIDFQF +A FD +ALPFNIPYPVPF+L  DE KGW+D TYLS  LR++RGNKGTLF+L+R
Sbjct:   10 ASTSGKPVAEKRLREALFEGSTRRDDSIGPELKRVIDECVAKLEEEGGVRDPTASDLINGRWKLLFTTRPGTSSPIQRAFTGIETFSIYQDIDL--EGLQPKVDNVVVFGDSVGVLKVEAEAVTDKRPRAGFVPRRGQG----LPFLGKSDSTPPS---GPNKRIDFQFSKAAFDLKALPFNIPYPVPFKLLQDESKGWLDTTYLSNDLRLSRGNKGTLFILER 224
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A7R9VSS3_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VSS3_9CHLO)

HSP 1 Score: 226 bits (577), Expect = 9.910e-65
Identity = 121/225 (53.78%), Postives = 154/225 (68.44%), Query Frame = 3 
Query:  327 GKGKALEAELLSAIDGVQGRGRD-VTPEQRSLVDKAVEALEEFGGV--PDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSE--RLRIARGNKGTLFVLQR 986
            GK    +A +L A+ GV+GRG+  ++ EQR+ ++ AVE LE  GGV  P R    L+DG WRL+FT+ PGTASP+Q +F  V+ F+++QD+ L  EQ  P + NVVDFG  VG LRV ALAST ++P+EGF PR+G G    L   G S   PP+    P  RIDFQFD+A F F+ +PF IPYPVPFRL GDE KGW+DVTY+S     R++RGNKGTLFVL R
Sbjct:   52 GKVSDAQATILQALTGVKGRGKSGLSEEQRAAINAAVELLEADGGVGKPTRDEQ-LLDGRWRLLFTSRPGTASPIQNTFTGVEAFSVFQDVQLRGEQ--PRIDNVVDFGPDVGYLRVEALASTDNKPLEGFTPRKGAG----LPFFGKSFVYPPQK---PDMRIDFQFDKAAFYFKKVPFTIPYPVPFRLLGDETKGWLDVTYISRDGNFRLSRGNKGTLFVLVR 266
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BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Match: A0A835YCB0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YCB0_9CHLO)

HSP 1 Score: 224 bits (571), Expect = 4.790e-64
Identity = 117/225 (52.00%), Postives = 153/225 (68.00%), Query Frame = 3 
Query:  336 KALEAELLSAIDGVQGRGRD-VTPEQRSLVDKAVEALEEFGGVPDRASSPLVDGSWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAP-----PTVTNVVDFGTKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCDPSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSER--LRIARGNKGTLFVLQR 986
            K  EA +L+A+ G +GRG++ ++PE  S ++ AV  LE  GGV +   SP +DG WRL++T+ PG+ASP+QR+F  V+ F I+QD++L +E A      P V NVV+FG  VG L+V A AST S P+ GF PR G+G  FG  I+G S T PP     P  R+DFQFD A F F +LPF +PYPVPFRL GDE KGWIDVTY++     R+ RGNKGTLF+LQ+
Sbjct:   37 KEAEAAVLAALSGAKGRGKEGLSPEDLSSLEAAVAKLEADGGVVEPTLSPTLDGRWRLLYTSRPGSASPIQRTFTGVESFGIFQDVELRAEAAEGEEGGPRVNNVVEFGA-VGYLKVEAQASTQSNPLPGFTPREGEGLPFG--IMGRSFTYPP---ARPHSRVDFQFDRAAFYFRSLPFTLPYPVPFRLLGDERKGWIDVTYMNAEGTFRLTRGNKGTLFILQK 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI51_ECTSI2.360e-14372.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z824_9STRA3.650e-8462.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CNY0_9STRA1.400e-7354.84Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6V1SXP2_HETAK1.020e-7158.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2P6TS10_CHLSO3.780e-6858.08Putative plastid-lipid-associated chloroplastic n=... [more]
A0A2P6VFQ7_9CHLO1.970e-6757.48Putative plastid-lipid-associated chloroplastic is... [more]
A0A5J4YBD5_9CHLO3.860e-6755.41Putative plastid-lipid-associated chloroplastic-li... [more]
A0A5B8MHL9_9CHLO8.030e-6653.13Plastid lipid-associated fibrillin n=1 Tax=Chlorop... [more]
A0A7R9VSS3_9CHLO9.910e-6553.78Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A835YCB0_9CHLO4.790e-6452.00Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:399648..405887 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI51
PFAMsPAP_fibrillin
Model size1650
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0016020,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Exons7
Evalue2.06e-147
EggNOG OGs2CN7K@1|root,2QUCQ@2759|Eukaryota
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-10_003560.1
DescriptionPAP_fibrillin
Cds size960
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.82.1prot_P-littoralis_Contig63.82.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig63 400420..405843 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791314.1811242-UTR-P-littoralis_Contig63:399647..3999881680791314.1811242-UTR-P-littoralis_Contig63:399647..399988Pylaiella littoralis U1_48UTRP-littoralis_Contig63 399648..399988 -
1680791314.1942832-UTR-P-littoralis_Contig63:400114..4004191680791314.1942832-UTR-P-littoralis_Contig63:400114..400419Pylaiella littoralis U1_48UTRP-littoralis_Contig63 400115..400419 -
1680791314.281216-UTR-P-littoralis_Contig63:405843..4058871680791314.281216-UTR-P-littoralis_Contig63:405843..405887Pylaiella littoralis U1_48UTRP-littoralis_Contig63 405844..405887 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791314.2038078-CDS-P-littoralis_Contig63:400419..4005241680791314.2038078-CDS-P-littoralis_Contig63:400419..400524Pylaiella littoralis U1_48CDSP-littoralis_Contig63 400420..400524 -
1680791314.215452-CDS-P-littoralis_Contig63:400991..4010991680791314.215452-CDS-P-littoralis_Contig63:400991..401099Pylaiella littoralis U1_48CDSP-littoralis_Contig63 400992..401099 -
1680791314.2255247-CDS-P-littoralis_Contig63:401519..4017051680791314.2255247-CDS-P-littoralis_Contig63:401519..401705Pylaiella littoralis U1_48CDSP-littoralis_Contig63 401520..401705 -
1680791314.236607-CDS-P-littoralis_Contig63:402196..4024101680791314.236607-CDS-P-littoralis_Contig63:402196..402410Pylaiella littoralis U1_48CDSP-littoralis_Contig63 402197..402410 -
1680791314.2534711-CDS-P-littoralis_Contig63:404897..4051931680791314.2534711-CDS-P-littoralis_Contig63:404897..405193Pylaiella littoralis U1_48CDSP-littoralis_Contig63 404898..405193 -
1680791314.267701-CDS-P-littoralis_Contig63:405792..4058431680791314.267701-CDS-P-littoralis_Contig63:405792..405843Pylaiella littoralis U1_48CDSP-littoralis_Contig63 405793..405843 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig63.82.1

>prot_P-littoralis_Contig63.82.1 ID=prot_P-littoralis_Contig63.82.1|Name=mRNA_P-littoralis_Contig63.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
MRYADILALVVLPVGAKGFAPSLVHPARRSSVPETTQHHETRPRSRGPRP
APSLLRRTSPSLSAASAAAASPSSPAEYIMALFGVNKGESAKTGGKGKAL
EAELLSAIDGVQGRGRDVTPEQRSLVDKAVEALEEFGGVPDRASSPLVDG
SWRLIFTTTPGTASPVQRSFVRVDGFAIYQDIDLFSEQAPPTVTNVVDFG
TKVGQLRVTALASTPSRPMEGFVPRRGDGRFFGLNILGVSQTTPPKVSCD
PSGRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLR
IARGNKGTLFVLQRPPPTA*
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mRNA from alignment at P-littoralis_Contig63:399648..405887-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig63.82.1 ID=mRNA_P-littoralis_Contig63.82.1|Name=mRNA_P-littoralis_Contig63.82.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6240bp|location=Sequence derived from alignment at P-littoralis_Contig63:399648..405887- (Pylaiella littoralis U1_48)
GCGTGTAACTCTGACGCCGGGTACACCGTACCACCTGCTGCGAGATGCGC
TACGCCGATATTCTGGCGTTGGTGGTGCTTCCAGTAGGAGCAAAGGTAAA
ATTATTGTCGAGCTGGTGAGAACACTGCACCGTCCAGGGATGAAACGTTT
CTCCTCACGCGTCACAACTAGACGCAACGACGCAACGTTGTTGACGACTA
CAGAGTACTCGTTTTGTACAAGTATATTTATCTTCCGGAAGCAGTGTTGG
ACATGATACACCTACTTCGCAGCAGCGGTACAGCAGCGGTATGCACTTGT
AGATACCCAGGCTGAGTTTCCCAGGAAAGTACGAGAAGGAATTGTGGCAA
AGGGCACGATACACTCTGAGATGTGCCGATGTGCCGCCCCAGCCAAACTT
CCCACCTGATGTGTGCTGAAGTCACGCAGTTCGGCTGTAGTTCAGCAGGA
GAAACAGGTTCCACGAAGGAAAACAAGGAAGGTGGGACCAACCTAAATGC
AATAGATTCGTGCACAGCAGTACATTGATAGTAGTCCTGAACTGCTGCTC
GACTGCTACAGCAGTACTTCTGTCGTGCCACGCTCAGCAGGTCGCTTTCA
GCATAATAGCCCTAACTCTCTCTCCCTCTCTCACACGCACACTCTCACTC
CTCTCCTGCGTTCCCCCTGTGATCTTCATGTTTTCTACTTGTAGGGGTTC
GCACCCAGCCTCGTGCACCCCGCCAGGCGCAGCTCGGTGCCAGAAACAAC
CCAACATCATGAAACGAGACCAAGGAGCAGAGGTCCGCGCCCGGCACCGT
CGTTGCTCAGAAGGACATCACCATCATTATCGGCAGCGTCGGCAGCGGCG
GCGTCACCATCATCTCCGGCTGAGTACATAATGGCCCTGTTCGGGGTCAA
CAAGGGAGAGTCGGCGAAGACGGGGGGCAAGGGAAAGGCACTAGAGGCGG
AGCTGCTGTCTGCAATCGATGGTGTTCAGGGCAGGGGCAGGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTGTTGATTCTCACATTA
GCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATATCG
TGCTAGGAGGAAAAAAATAAAAAAATAAAATAAATGGACTGTGATCACCC
ACAGTCAGATCAGACATGGTACCGTTGGGGTACCATCTGTGGTGGCCAGA
ATACCAAGCAAATACAGAAGAAAATAACTGGCTCGAAAGAAAAAACAAAA
ATTGGAAACAGTCCGACAAACAAAAAATAACCAAGACAAACCTCAACCAT
AACCATATACTTCGAAGTACTTCGTGCATCGAACCAGGGCCCAGGGCCAT
GACAGACCAAGGCAGACGCAAACCAGGGCGATGGTCCAGTAACTACATGA
TCAACAGACGAAAGACAAAAAATAAAATAAAAAAGAAGATACAGGGAGGG
CACAAAGACTGAGGGAGTGCATTCGTAGACAAACACAACAAACAGGCCGC
CAAACAAAGAGGAAGCAGGGGAACGAAAAGGGAAAAGAAGATCGGAAGTA
CCGGAAGTCGGGGGGAGGTGATAAAAGTAAAATAAAAGGCATGCAATCAA
TCGCAAACGTGTCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTC
AGTCGCACTCATGCCTCCTGCTACTGGCACCACCGTACCCAGTTGTTTCT
GCCCCACATCTTTGGCAGCAGCTACACCACCATTCTGCCTTATAGGTTTT
CCACTCCGGCCACCCCGTAGCTTGGCTTTGGACTGCTTCTTCTTGTGCTG
TGCAACTCCAACCCCACTACCCCGCTGCCCTTATGCCCCCCCGTACCCCT
CCTCTCGTTTATCCCCGCCATCCGTTCTCCCTCTTTTAGTCAAGGCCTGC
CTCTCAGCCGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAGGTC
TCCCTCTTTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGA
TCCTGTCGTACCACTCGTCGGCTCTCTTGGCACTTGCCTCCCACCCCTCC
TTTTTGTCGACCACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCT
CAGCCAGTCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCATTT
CTCCCAAAAGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCAACG
AATCCTGCGAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTC
GTCGCAACCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTG
TTCTCTCCCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTGGTGG
GCTGACCGAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACA
CCCGTAGAGTAGGGTCTCAACGACTTCAGCTTGGAGGAGTCGTACTTTTA
GTCGAAGAGGGGCCCCTGGGCGGTCGTACATTGCCTGGCTGTTGCGCCGG
AAGCAGGCGTGCGCTCGCTGCACTCGGTGGTTAATCTCGCCCTCAATGCT
ACCGTCCTCACAAATCTTACCCCGAGATAAACAAAGTCTTTCTTCCGCTT
GAAGACCATCCCGGCAGCGTCGATCGTGAACGAGCACGTTCGCGAGCATA
CACATGGTCTCCGTCTTGGGTTCTGACACCAACAGCCCAAACCGCCCGGC
CACACGTACGATGATCGACATCATCTTCTCAAGGCTCCCAGGTGATTGAG
ATACAATACAGGCGTCGTCGGCGTAGAGCATACTCCAGATGGACTTCACT
GCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTCGTCACCTTCCTCTT
GACCTTGGCCATGTCCGCCATCACCTCCGCGTCCTTGCTGATCTCGGCAA
AGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGAACAGCAGGGGTGCC
AGATTGCATCCCTGTCGGAGTCCCTGCCCCACATCAAACCAGTCGGAGCA
CCTCCCGTCGTCCATCCGTACGCATGCTCTCATTCCGTCGTGGAATTGGT
GTGTGTGTTTGTGTGTGTGTTTGTGTATTTGTTTGTGTTGGGTGCTTGTT
TGTGTGTATGTGTGTCCATGACCTACGTGTTATATATTTCATCAGAATGC
GATGCTCAAAAAGTCAAGCTGTTGGCCGTGCTACTCTTCAAACAGGAGCT
CTGTACACAACATAAAAAATGATTGGCACCCCCGTACGGAACGAAATCAC
GAAATATACCCCATAGGCATCATGATCGAGTACCGTATATAAAGTTTATC
ATTGTCCACCGATGTGTAACACACACATCGCATCCAACGCAGGATCAGGC
GCAGAGAGGAAGGACTGCTGTGCACAGTGAGGGAAGGCCCTACTCTCTTC
ATGACAAGACAAATGTCTGTGCCCACTTATGTTTCCCCATGATCCTCACG
TCGTGTATACGCATACGTGTGCGCCAGGGACGTTACCCCGGAGCAGCGGA
GTCTAGTGGACAAGGCGGTGGAGGCCCTCGAGGAGTTTGGAGGCGTTCCC
GACAGAGCCTCGAGCCCCCTCGTCGACGGTAGCTGGAGGCTGATCTTCAC
CACCACTCCCGGAACGGCGTCGCCTGTTCAGCGGTCCTTTGTCAGAGTTG
ACGGGTTCGCCATATACCAGGATATTGACCTGTTTTCCGAGGTAAAAACT
AGCCGAACTTCCACGTGTTGATTGCCCTCTCTGGTGCGGATGCGGGTGCT
GGTGCGGGTATTGCAGTTTCTTTTTTCTGCTAGTCCTACAGCTGCTCCCG
CTGCTCCTGCTCCCGCTCCTGTTGCTCAGTTGCTCCTGCATTTGTTCTCG
CTGTTGTCGCTGGAAAATGTAGTCATTGCTTTGGCGTTCATACACGCAGC
CCCTGAAATTCTTGGTTCCAACAGGCATCCTACGAAAACCTTCGCTACTC
GTTGCTTGTCACACTGCTGGTCAACGTACGCAGCATTGCCCAGTCTTACT
TGGACTGCAAGAGCTCACATGTCTCCAGGGTTAGTCGCCGAATAAAGGTT
TATGATCACGCGTGATCGCGAGAGGACAAGCCCCCCCCCCCCCCCCCCCC
CAAACGCCTTCCCAAGGCTGTATTCCCCGTTTACCTCTCTTCTTCTGCTT
CTTTCGTGCGCCCCCCCCCCCACTCTGCCCAGCAGGCGCCTCCAACGGTG
ACAAACGTGGTGGACTTCGGTACGAAGGTGGGGCAGCTCCGAGTGACCGC
GCTCGCCAGCACGCCTTCCAGGCCCATGGAGGGCTTTGTTCCGAGGAGGG
GCGACGGGCGATTTTTCGGCCTCAATATCCTGGGGGTCAGTCAAACTACC
CCCCCGAAGGTGAGCTGTGTGTAGAAGAAAAAGCAAGCGCGTGCTGGATG
TATCTTGCCGTTTTCAATGTTTGCTTAGACTTGAGTGTGCCACGGCTGGC
GGATTTTGTCGATATCACCACCGACCCACCCCAAAAGATACCGCCGTGGA
TGGGTGTTTTTTGTTTCCTGGTAAATAGCAGGACTAAGATCATACGTTCT
TCGGGGGGATGGTATGATACGTGTAGTTTTTTTTCTTGGTCGATAGTTGT
AACTCCCCTTCCCCCCCTCCCCCAATATTTTGTCGTACCACACGACGGCG
GTCTGTTGGCACTTGAATGCTCCCCACCCCCACCCCTTTCTTCAATTTTT
AATGTACACCCCGAATGCTGTGATGAATGTGGTATGTGTATCACCCTGTC
TGTTGTTGTTGACAACTGCTATCCCCGTATGATTTCAGGACCCGAGCGGG
CGCATCGACTTCCAGTTTGATGAGGCGGGTTTCGACTTCGAGGCGTTGCC
CTTCAACATCCCGTACCCGGTGCCCTTCCGCCTGTTTGGGGACGAGGTCG
GGTGGCGTTTCCGTTATTGTTTTATGTTTTGTACTTTTGTATCCTTTCGT
CGGCGCTGCGCTTTTGTGCGTTTTGTTTCGTACTCCGAAGTATGACAACA
CGAGCATCAGTTTGTGACGTCTAGACACCATATCGCACGCCATCAAAACA
AAAACAAAACTCGATGTTTTACTTTCGTCTCCATTTGTCACACGGCGAGA
CAACGCGGCAACTGGCTAGTGTTAATTAGTCCGTCTCCAGAAAGCGATAC
AACCTCCACTGCTCGCATGGATTAACAGCATAGCAATGCTCCTTTGCACC
AACCTCTCTCGTGCGCGGCGAACGGTATGCAGTTACTTCAGATGTTATAT
GCGTGAATTCGTGTGCGTGTGTGAGTGGGTTGACTGGGACTATCTACCCG
TCTATGTGTTTACCTGCTCATCATGCCCTTTTTCTCCTTTTTGTATTCTG
CGACAAACCACAGGTGAAGGGGTGGATAGATGTCACGTACCTGAGCGAGC
GCCTGCGGATAGCGCGGGGCAACAAGGGCACTCTGTTCGTGCTCCAAAGA
CCGCCGCCAACAGCATGATAGTGTCCGCCACGGCCAAATTCGCCCAAAGA
AATGGTTCGATCTCCAATAATGTCGTGGTCCCCCGCCTAGGTCACCTGTT
GGGGCTCGTATCTCTATTCTTTCAACATCGAATGACTCAATCGCTGTCAC
TGGCTCACATCTTTTTACGTGCCGGGGACTTATTACTCTGTACCTTTGGT
TTTTGACTCGTACAATCTGGAGATGGTAGCGGAGTGCAGAATGTTTGTTT
AACGGGAAGAGAGCGTGCTACGGCGATGCGGCTTGTCTCACCGCAATAGC
ACCATTGTCCCTGCGAATTCGATATATCCACAGCAGCGTGTGAAATGTTC
TATTGAGCGAGCGGGTGGGCGGGCGGGGGGGATATCGGAGTGATGCCCTA
CTAAATGGTTCTATCTCTGCGAGTTTAAGTACAAAGAATACCGAGCACGT
CGTGCTGGTCCAAAAAAGCGACCCACTTCCTCCGTCGTTTGTGCGATGGT
CCCTGTGGTTGGCCCGCACTCTGTGTGAAGACTTTCTTACCGTGTGGTAC
GTTATTTGTCCTTTTGGGCATTGATTGATTGACATTACTTGTACCTTTTT
GCAGATAGCGTCCAAGGCTTCCCGACGCCTTTTCCTCGGTAGGCTTTTTT
GTTCCCGTGTGAGCTCCAGCCGTGAGACGTACGATGGTGCATAGCCAATC
AGAAAACTGCGGGCACCTTTTATCTCTCTCTAGGGAGCTTCACAATGATC
CATTATAATATCATACGATGAGTGTAATACATGAACAACA
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Coding sequence (CDS) from alignment at P-littoralis_Contig63:399648..405887-

>mRNA_P-littoralis_Contig63.82.1 ID=mRNA_P-littoralis_Contig63.82.1|Name=mRNA_P-littoralis_Contig63.82.1|organism=Pylaiella littoralis U1_48|type=CDS|length=960bp|location=Sequence derived from alignment at P-littoralis_Contig63:399648..405887- (Pylaiella littoralis U1_48)
ATGCGCTACGCCGATATTCTGGCGTTGGTGGTGCTTCCAGTAGGAGCAAA
GGGGTTCGCACCCAGCCTCGTGCACCCCGCCAGGCGCAGCTCGGTGCCAG
AAACAACCCAACATCATGAAACGAGACCAAGGAGCAGAGGTCCGCGCCCG
GCACCGTCGTTGCTCAGAAGGACATCACCATCATTATCGGCAGCGTCGGC
AGCGGCGGCGTCACCATCATCTCCGGCTGAGTACATAATGGCCCTGTTCG
GGGTCAACAAGGGAGAGTCGGCGAAGACGGGGGGCAAGGGAAAGGCACTA
GAGGCGGAGCTGCTGTCTGCAATCGATGGTGTTCAGGGCAGGGGCAGGGA
CGTTACCCCGGAGCAGCGGAGTCTAGTGGACAAGGCGGTGGAGGCCCTCG
AGGAGTTTGGAGGCGTTCCCGACAGAGCCTCGAGCCCCCTCGTCGACGGT
AGCTGGAGGCTGATCTTCACCACCACTCCCGGAACGGCGTCGCCTGTTCA
GCGGTCCTTTGTCAGAGTTGACGGGTTCGCCATATACCAGGATATTGACC
TGTTTTCCGAGCAGGCGCCTCCAACGGTGACAAACGTGGTGGACTTCGGT
ACGAAGGTGGGGCAGCTCCGAGTGACCGCGCTCGCCAGCACGCCTTCCAG
GCCCATGGAGGGCTTTGTTCCGAGGAGGGGCGACGGGCGATTTTTCGGCC
TCAATATCCTGGGGGTCAGTCAAACTACCCCCCCGAAGGTGAGCTGTGAC
CCGAGCGGGCGCATCGACTTCCAGTTTGATGAGGCGGGTTTCGACTTCGA
GGCGTTGCCCTTCAACATCCCGTACCCGGTGCCCTTCCGCCTGTTTGGGG
ACGAGGTGAAGGGGTGGATAGATGTCACGTACCTGAGCGAGCGCCTGCGG
ATAGCGCGGGGCAACAAGGGCACTCTGTTCGTGCTCCAAAGACCGCCGCC
AACAGCATGA
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