mRNA_P-littoralis_Contig63.70.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig63.70.3
Unique NamemRNA_P-littoralis_Contig63.70.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: D7FI54_ECTSI (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI54_ECTSI)

HSP 1 Score: 616 bits (1588), Expect = 3.590e-217
Identity = 310/334 (92.81%), Postives = 325/334 (97.31%), Query Frame = 1 
Query:   85 MGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKVAQDDVLGKGL 1086
            MGEPK+RAKQVLKWIF GGA SF+DMANIPK LRAKLAKVATVG LEVAA+QVSKDGT+K+AYRLSDGQ+IESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQL++AEIFEQAYRFSQELQ RGDRLSNVVFMGMGEPLANYKNVMEAV RINTELGIGARHITISTVGLVPRILRLSQE+IQVKLAVSLHAANDRER ALLPVNRRFPLSELM+ACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPT GYKGGPSMA+AVNQFV+VLA+NGVPATPRIRRGIDIDAGCGQLT KV+QD+VLGKGL
Sbjct:    1 MGEPKFRAKQVLKWIFEGGAESFEDMANIPKTLRAKLAKVATVGALEVAARQVSKDGTKKLAYRLSDGQIIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLSAAEIFEQAYRFSQELQKRGDRLSNVVFMGMGEPLANYKNVMEAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERGALLPVNRRFPLSELMDACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTDGYKGGPSMADAVNQFVEVLAKNGVPATPRIRRGIDIDAGCGQLTAKVSQDEVLGKGL 334
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A6H5KMC8_9PHAE (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC8_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 4.500e-196
Identity = 298/342 (87.13%), Postives = 310/342 (90.64%), Query Frame = 1 
Query:   31 KVNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNV------------------VFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPR 1002
            KVNLLEMSNAEVEAFLV MGEPK+RAKQVLKWIF GGA SF+DMANIPK LRAKLAKVATVG LEV     SKDGT+K+AYRLSDGQ+IESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQL++AEIFEQAYRFSQELQ RGDRLSNV                  VFMGMGEPLANYKNVMEAV RINTELGIGARHITISTVGLVPRILRLSQE+IQVKLAVSLHAANDRER ALLPVNRRFPLSELM+ACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPT GYKGGPSMA+AVNQFV+VLA+NGVPATPR
Sbjct:  254 KVNLLEMSNAEVEAFLVAMGEPKFRAKQVLKWIFEGGAESFEDMANIPKTLRAKLAKVATVGALEV-----SKDGTKKLAYRLSDGQIIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLSAAEIFEQAYRFSQELQKRGDRLSNVIHRTVDVANAALSSPSTKVFMGMGEPLANYKNVMEAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERGALLPVNRRFPLSELMDACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTDGYKGGPSMADAVNQFVEVLAKNGVPATPR 590
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A836CIK3_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIK3_9STRA)

HSP 1 Score: 510 bits (1313), Expect = 2.570e-175
Identity = 260/346 (75.14%), Postives = 293/346 (84.68%), Query Frame = 1 
Query:   49 MSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKVAQDDVLGKGL 1086
            MS AE+E  L   G+PKYRA QVL+    G A  F DM N+PKALR +L +   +G L +AA+QVSKDGTRK AY L DGQ+IESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGF RQLT+ EIFEQA+RF+ EL+ +G+RLSNVVFMGMGEPLANY NVMEAV RIN++LGIGARHITISTVGLVPRI RL+QED+QVKLAVSLHAAND+ERSALLPVNRRFPL+ELM+AC+ YVD SGRRMTFEWALI GENDS   A ELGRLL PL+GMCHVN+IPLNPT G+ GGP+ A AV  FV+ LAR+ VPATPR+RRGIDIDAGCGQLT  V ++ VLGKGL
Sbjct:    1 MSKAELETLLQSWGQPKYRAAQVLEAAEQGKA--FADMQNLPKALRQQLEENVQLGSLSLAAEQVSKDGTRKRAYALRDGQLIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTADEIFEQAFRFASELRLKGERLSNVVFMGMGEPLANYANVMEAVRRINSQLGIGARHITISTVGLVPRIQRLAQEDLQVKLAVSLHAANDKERSALLPVNRRFPLAELMDACKAYVDQSGRRMTFEWALIHGENDSRRTAEELGRLLAPLRGMCHVNVIPLNPTQGFAGGPAQAAAVAAFVETLARHSVPATPRVRRGIDIDAGCGQLTASVQREKVLGKGL 344
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: L1JN17_GUITC (Radical SAM core domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN17_GUITC)

HSP 1 Score: 454 bits (1169), Expect = 1.750e-152
Identity = 231/360 (64.17%), Postives = 282/360 (78.33%), Query Frame = 1 
Query:    4 EGQEGPAPF--KVNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLR-------PLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKV 1056
            +  E PA    KVNL  ++   +E  L+  GEPK+RAKQ+ +WI   GA  FD M ++PK LRAKLA+ A +G LE+A +QVSKDGT K AY+L DGQ+IESVLMPY DGRRTACISSQAGCAMGCVFCATGQMGF RQLTS EI EQ  RF  EL ++G+RLSNVV MGMGEPL NY NVMEAV RIN +LGIGARHITISTVGLVPRI RL++E++Q+KLAVSLHAA+D ER+A++PVN RFPL++LME C+ YV+ +GRR++FEWALI G+ND+ EVA++LG LL+        L  MCHVN+IPLNPTAG+ G P+ A   + F+ +L++ GV AT R+RRGIDIDAGCGQL  K+
Sbjct:   37 DAMEAPADLEGKVNLYALNQTRMEELLLDWGEPKFRAKQIWQWINVKGATDFDKMQDLPKGLRAKLAEKAVLGNLEIAVEQVSKDGTIKRAYKLKDGQMIESVLMPYDDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSVEILEQVQRFHVELLSKGERLSNVVLMGMGEPLGNYNNVMEAVRRINQDLGIGARHITISTVGLVPRIRRLAEENMQIKLAVSLHAASDEERNAIMPVNLRFPLADLMETCKFYVEKTGRRISFEWALIAGQNDTPEVANKLGHLLKWNDFNPQGLNKMCHVNLIPLNPTAGFDGKPTKAAECDIFIKILSKYGVTATTRVRRGIDIDAGCGQLKSKL 396
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A7S1DYM6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYM6_HEMAN)

HSP 1 Score: 449 bits (1155), Expect = 1.020e-149
Identity = 230/351 (65.53%), Postives = 274/351 (78.06%), Query Frame = 1 
Query:   31 KVNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKVAQDDVLGKG 1083
            ++NL  +S   +E  LV  G  K+ AKQV +W++  GA + DD  N+ K +R  L   AT+G L +A +Q SKDGT K AY L DGQ+IESVLMPY+DGRRTACISSQAGCAMGCVFCATGQMGF RQLT++EIFEQ  RF  EL  +G+RLSNVV MGMGEPL NY NV+ AV R+N E+GIGARHITISTVGLVPRI RLS+E +QVKLAVSLHAANDRERS ++PVN RFPLSELM+ACR+Y+  +GRR+TFEWALI G+ND+ E A ELG LL+ +  MCHVN+IPLNPT+G+ G P+ A  V  FV+VLA  GV ATPR+RRGIDIDAGCGQL  KV +   LG+G
Sbjct:  107 RINLWSLSPPALEELLVSWGAKKFVAKQVHQWMYEKGATNIDDFTNVSKQMREMLKSKATLGTLSIATQQESKDGTIKRAYALPDGQLIESVLMPYNDGRRTACISSQAGCAMGCVFCATGQMGFARQLTASEIFEQVLRFHCELAQKGERLSNVVLMGMGEPLGNYNNVLTAVRRMNEEVGIGARHITISTVGLVPRIQRLSKEGLQVKLAVSLHAANDRERSEMMPVNVRFPLSELMQACRDYIRDTGRRITFEWALIAGKNDTPETAHELGALLQGM--MCHVNLIPLNPTSGFDGKPTQAADVKTFVEVLAEYGVTATPRVRRGIDIDAGCGQLKSKVQK--ALGRG 453
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A7S2SP67_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP67_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 1.580e-148
Identity = 220/349 (63.04%), Postives = 268/349 (76.79%), Query Frame = 1 
Query:    7 GQEGPAPFKVNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVK 1053
            G  G    ++NLL +S AE+E  +   G+PKYRAKQ+L+W+   G  S+DDMAN+PKALR  L +  T+G L   A+Q+SKDGT K AY L+DG +IESVLMPY DGRRTACISSQAGC MGC FCATGQMGF R L++ EIFEQA   S ELQ R +RLSNVVFMGMGEPLANY NV+EA  RINTELGIGARHITISTVG+VP+IL+L++E  Q  LAVSLH A D  RS+++P+NRR+ + EL+ ACREY  ++GRR+TFEWALI G ND  +VA  LG+LL+ +K  CHVNIIPLNPT G+ G P+   ++ +F+ +L   GVPAT R+RRGIDIDAGCGQLT K
Sbjct:    3 GSTGGTALQLNLLSLSKAELEELVQSWGQPKYRAKQILEWVLDKGVRSYDDMANLPKALRQLLEEHTTLGSLTCEAEQISKDGTTKRAYALADGSLIESVLMPYQDGRRTACISSQAGCGMGCKFCATGQMGFVRHLSATEIFEQAQVLSAELQQRDERLSNVVFMGMGEPLANYDNVLEAARRINTELGIGARHITISTVGIVPKILKLAREPSQFTLAVSLHEATDEGRSSIMPINRRYNIDELLGACREYTAITGRRVTFEWALIHGSNDQPQVAHGLGKLLKGMK--CHVNIIPLNPTQGFLGKPANPTSLKRFISILESYGVPATSRVRRGIDIDAGCGQLTQK 349
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: UPI0019B4B354 (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B4B354)

HSP 1 Score: 432 bits (1111), Expect = 1.030e-144
Identity = 215/340 (63.24%), Postives = 268/340 (78.82%), Query Frame = 1 
Query:   37 NLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKV 1056
            NL  +S  ++   L    EP+YRA Q+  W++ G A SFD+M N+ K+LR +L    T+GVL   A+++SKDGT K  Y+LSDGQ+IE+VLM Y DGRRTACIS+QAGCAMGCVFCATGQMGF R L++AEIFEQA  FS +L+ +GDRLSNVV MGMGEP  NY   ++AV+R++ ELGIGARHITISTVGLVP+I + + E +QVKLA+SLHAA D ER ALLP+N+R+PL EL++ACR Y+D +GRR+TFEWALI+GEND+ E A+ LG+LLR L  MCHVN+IPLNPT GY GGP+ +EA  QF+D LA+ GV AT R+RRGIDI+AGCGQL  KV
Sbjct:    3 NLYNLSKDQLIEMLASWNEPRYRADQLWTWLYEGRATSFDEMTNLSKSLRERLKAETTLGVLTQVAEEISKDGTVKRLYQLSDGQLIEAVLMVYEDGRRTACISTQAGCAMGCVFCATGQMGFARHLSAAEIFEQALLFSGDLERQGDRLSNVVLMGMGEPFHNYDASIQAVHRLSNELGIGARHITISTVGLVPQIRQFADEGMQVKLAISLHAATDAERGALLPINKRWPLEELLDACRYYIDKTGRRITFEWALIEGENDTPEQANALGKLLRGL--MCHVNLIPLNPTPGYAGGPTQSEASQQFIDTLAQYGVGATMRVRRGIDINAGCGQLKSKV 340
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BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A2E0L453_9CHLR (Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0L453_9CHLR)

HSP 1 Score: 424 bits (1089), Expect = 2.310e-141
Identity = 213/341 (62.46%), Postives = 257/341 (75.37%), Query Frame = 1 
Query:   34 VNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKV 1056
            +NL E+S  E+   L   GEPK+RA+Q+  W++      +D M N+P  LR +L     +GVLE+A +Q+S+DGT K  YRL DGQ IESVLM Y D RRTACIS+QAGCAMGCVFCATGQMGF R LT+AEIFEQA  F++EL+A GDRLSNVV MGMGEP  NYK  + A+ R+ ++LGIGARHIT+STVGLVP I R + E +QVKLA+SLHAA D ER ALLPVNRR+PL+ELM AC EYV+ + RR+TFEWALI GE D+ E A  LG+LL+ L  +CHVN IPLNPT GY GGPS   A  QF+D+L++ GV AT R+RRGIDIDAGCGQL   V
Sbjct:    2 INLYELSKDELTHLLGEWGEPKFRAQQIWDWLYEKRVGDYDAMTNLPARLRERLKTETRLGVLELATEQISRDGTIKRLYRLPDGQFIESVLMIYDDDRRTACISTQAGCAMGCVFCATGQMGFARNLTAAEIFEQAMAFARELEAEGDRLSNVVLMGMGEPFHNYKQSLAAIRRLMSDLGIGARHITVSTVGLVPHIKRFADEGLQVKLAISLHAATDEERGALLPVNRRWPLNELMAACHEYVNKTRRRITFEWALISGETDTPEQAHALGKLLKGL--LCHVNAIPLNPTPGYSGGPSDTAAAEQFIDILSQYGVSATVRVRRGIDIDAGCGQLKASV 340
[Close]
BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: UPI001988E7AE (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI001988E7AE)

HSP 1 Score: 417 bits (1073), Expect = 5.970e-139
Identity = 206/342 (60.23%), Postives = 262/342 (76.61%), Query Frame = 1 
Query:   31 KVNLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKV 1056
            ++NL E+S  +++       EPK+RA QV  W++   A SF+ M N+PK LR  L    ++G L    +Q+S+DGT K  YRL DGQ+IESVLMPY D R+TACIS+QAGCAMGCVFCATGQMGF R LT+AEIFEQ   F+++L+A G+RLSNVV MGMGEP  NY   + A+ R+  +LGIGARHIT+STVGLVP+I R ++E +QVKLA+SLHAA D ER+ALLP+N+R+PL+EL+EACR+Y++ +GRR TFEWALI+GEND+ E A  LG LLR L  +CHVN+IPLNPT+GY GGPS  +A + F+ +LA+ GV AT R+RRGIDI AGCGQL  KV
Sbjct:    4 RINLYELSREQLDELFQSWDEPKFRAGQVWSWLYEKRAPSFEAMTNLPKTLRELLELETSLGKLVKVTEQISRDGTIKRVYRLPDGQLIESVLMPYDDNRQTACISTQAGCAMGCVFCATGQMGFARHLTAAEIFEQVMVFARDLEAEGERLSNVVLMGMGEPFHNYDQSIIAIRRMMDDLGIGARHITVSTVGLVPQIRRFAEEGLQVKLAISLHAATDEERAALLPINKRWPLAELIEACRDYIEKTGRRPTFEWALIRGENDTKEQAHALGELLRGL--LCHVNLIPLNPTSGYSGGPSNVDATDAFIRILAKYGVTATVRVRRGIDIAAGCGQLKAKV 343
[Close]
BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Match: A0A2E7UQH0_9DELT (Dual-specificity RNA methyltransferase RlmN n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UQH0_9DELT)

HSP 1 Score: 416 bits (1070), Expect = 1.880e-138
Identity = 209/343 (60.93%), Postives = 261/343 (76.09%), Query Frame = 1 
Query:   37 NLLEMSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLAKVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVVFMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQEDIQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFEWALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEAVNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKVAQD 1065
            +LL +S A++ A+L   G+  +RA+Q+ +W++  GA+S D M+++P+ALR  LA    +G L VA +Q SKDGT K  YRL DG +IESVLM Y+DGRRTACISSQAGCAMGCVFCATGQMGF R L+S EIFEQ +R+ + L+A G+RLSNVV MGMGEP  NY  V+ A+ R+N +LGIGARHIT+STVG+VPRI  L+ E IQV LAVSLHAA D  RSAL+PVNR++ +  L+EACREYV+ + RR+TFEWALI+GE DS   A  LGRLL  L  +CHVN+IPLNPT GY G PS  E V +F+  L R GVPA+ R+RRGIDIDAGCGQL  +V ++
Sbjct:    6 DLLSLSEADLAAWLAQRGQRSFRARQIRRWLYQKGASSVDQMSDLPRALRESLAAETALGTLRVATEQSSKDGTVKRLYRLPDGHLIESVLMRYADGRRTACISSQAGCAMGCVFCATGQMGFARHLSSTEIFEQVWRYDRALKAEGERLSNVVLMGMGEPFHNYNPVVAAMKRMNKDLGIGARHITVSTVGIVPRIKSLADEGIQVTLAVSLHAATDTARSALMPVNRKWSIETLVEACREYVEKTHRRITFEWALIEGETDSVAEAQRLGRLLSGL--LCHVNVIPLNPTGGYGGQPSAPERVQRFLQTLGRYGVPASVRVRRGIDIDAGCGQLRSRVMEE 346
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.70.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI54_ECTSI3.590e-21792.81Radical SAM core domain-containing protein n=1 Tax... [more]
A0A6H5KMC8_9PHAE4.500e-19687.13Radical SAM core domain-containing protein n=1 Tax... [more]
A0A836CIK3_9STRA2.570e-17575.14Radical SAM core domain-containing protein n=1 Tax... [more]
L1JN17_GUITC1.750e-15264.17Radical SAM core domain-containing protein n=2 Tax... [more]
A0A7S1DYM6_HEMAN1.020e-14965.53Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2SP67_9STRA1.580e-14863.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI0019B4B3541.030e-14463.2423S rRNA (Adenine(2503)-C(2))-methyltransferase Rl... [more]
A0A2E0L453_9CHLR2.310e-14162.46Probable dual-specificity RNA methyltransferase Rl... [more]
UPI001988E7AE5.970e-13960.2323S rRNA (Adenine(2503)-C(2))-methyltransferase Rl... [more]
A0A2E7UQH0_9DELT1.880e-13860.93Dual-specificity RNA methyltransferase RlmN n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:358434..370322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI54
PFAMsFer4_14,Radical_SAM
Model size1873
Max annot lvl2759|Eukaryota
KEGG koko:K06941
Hectar predicted targeting categoryother localisation
Exons9
Evalue5.63e-223
EggNOG OGsCOG0820@1|root,2QSIE@2759|Eukaryota
Ec32 ortholog descriptionRibosomal RNA large subunit methyltransferase RlmN/Cfr
Ec32 orthologEc-10_003600.1
EC2.1.1.192
DescriptionRadical SAM superfamily
Cds size1041
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.70.3prot_P-littoralis_Contig63.70.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig63 359802..369538 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791313.619605-UTR-P-littoralis_Contig63:358433..3584661680791313.619605-UTR-P-littoralis_Contig63:358433..358466Pylaiella littoralis U1_48UTRP-littoralis_Contig63 358434..358466 +
1680791313.636311-UTR-P-littoralis_Contig63:359786..3598011680791313.636311-UTR-P-littoralis_Contig63:359786..359801Pylaiella littoralis U1_48UTRP-littoralis_Contig63 359787..359801 +
1680791313.7568045-UTR-P-littoralis_Contig63:369538..3703221680791313.7568045-UTR-P-littoralis_Contig63:369538..370322Pylaiella littoralis U1_48UTRP-littoralis_Contig63 369539..370322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791313.6464205-CDS-P-littoralis_Contig63:359801..3598671680791313.6464205-CDS-P-littoralis_Contig63:359801..359867Pylaiella littoralis U1_48CDSP-littoralis_Contig63 359802..359867 +
1680791313.6567438-CDS-P-littoralis_Contig63:360743..3608541680791313.6567438-CDS-P-littoralis_Contig63:360743..360854Pylaiella littoralis U1_48CDSP-littoralis_Contig63 360744..360854 +
1680791313.6729078-CDS-P-littoralis_Contig63:361242..3614131680791313.6729078-CDS-P-littoralis_Contig63:361242..361413Pylaiella littoralis U1_48CDSP-littoralis_Contig63 361243..361413 +
1680791313.6870127-CDS-P-littoralis_Contig63:361979..3620781680791313.6870127-CDS-P-littoralis_Contig63:361979..362078Pylaiella littoralis U1_48CDSP-littoralis_Contig63 361980..362078 +
1680791313.7049975-CDS-P-littoralis_Contig63:362626..3627851680791313.7049975-CDS-P-littoralis_Contig63:362626..362785Pylaiella littoralis U1_48CDSP-littoralis_Contig63 362627..362785 +
1680791313.7190177-CDS-P-littoralis_Contig63:367870..3680501680791313.7190177-CDS-P-littoralis_Contig63:367870..368050Pylaiella littoralis U1_48CDSP-littoralis_Contig63 367871..368050 +
1680791313.7313921-CDS-P-littoralis_Contig63:368770..3689371680791313.7313921-CDS-P-littoralis_Contig63:368770..368937Pylaiella littoralis U1_48CDSP-littoralis_Contig63 368771..368937 +
1680791313.747033-CDS-P-littoralis_Contig63:369450..3695381680791313.747033-CDS-P-littoralis_Contig63:369450..369538Pylaiella littoralis U1_48CDSP-littoralis_Contig63 369451..369538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig63.70.3

>prot_P-littoralis_Contig63.70.3 ID=prot_P-littoralis_Contig63.70.3|Name=mRNA_P-littoralis_Contig63.70.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=347bp
MSNAEVEAFLVGMGEPKYRAKQVLKWIFGGGAASFDDMANIPKALRAKLA
KVATVGVLEVAAKQVSKDGTRKMAYRLSDGQVIESVLMPYSDGRRTACIS
SQAGCAMGCVFCATGQMGFKRQLTSAEIFEQAYRFSQELQARGDRLSNVV
FMGMGEPLANYKNVMEAVNRINTELGIGARHITISTVGLVPRILRLSQED
IQVKLAVSLHAANDRERSALLPVNRRFPLSELMEACREYVDVSGRRMTFE
WALIQGENDSAEVASELGRLLRPLKGMCHVNIIPLNPTAGYKGGPSMAEA
VNQFVDVLARNGVPATPRIRRGIDIDAGCGQLTVKVAQDDVLGKGL*
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mRNA from alignment at P-littoralis_Contig63:358434..370322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig63.70.3 ID=mRNA_P-littoralis_Contig63.70.3|Name=mRNA_P-littoralis_Contig63.70.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11889bp|location=Sequence derived from alignment at P-littoralis_Contig63:358434..370322+ (Pylaiella littoralis U1_48)
GGGGAAGGACAAGAAGGGCCTGCACCTTTCAAGGTCAGCGTGTTAAAATG
CTTGTCGGTGCTCGGATACCCGCCGTTATGGACAGCAGTACCACAAACGT
ACCATCCTCATCGGGTCTCTTCCTACGAGTATATGTTGTGTTCCGACACT
TGAACGACAGCAGTGTACAAGTGCAAGCACAAGGAGACTGCTACACCACC
TCTGTAGATGGGCCTATTCTTCAAGCATCATTTTATCATACCAGTATCAT
ACTGCCGCATCAAGAAAAGCCTCCTGAAACTGCTGTTGAGTGTGTACGGC
GCACTCGGAAGGATACCCTTGGGGACTCGAACCCCCGCCGGAAAACCACT
TTCAGAGAAAGCTGGAAGAGAGTCATATATATATTTTTTCGCCTTTGTAT
TTCGAACCAACGTGGTTCGGTTCAGGAACAACAGCAGTGTACGTATGAGA
TGATCGAACGTACGTATCATCCCATACCTAACATTTGCAGTTGGTACATG
ATAGTTCAAACGCGATTATATTCACCACTTGCGCGCACAATAAATTACCC
TGGTAGTTAGAAGTACCTGGTCCTTCGAAGTATAACATGATACGCTCGAG
TATTACGCTTTCTTTACGTTTTTAGCCTTGTCTACATTTCGGACCTCTCT
CTGCGACTCGTGTATCTAATGCCAACACCCACAGAAAAGAGAGACGGAAG
CCCGCCACCTCTCAACCGGTCGGGTCATCCGTATGATATAACGTCACGAA
ACACTCTTGCAGCAGTAAGTAGTCGCACGAGCACGGAGTTACCAGATAAA
GATCCGCTCGTTTTTTTTTACACCAAGACATCAACGTCAACGACAACAGC
AGCAACGTTAACAACATAAATAAAAACATCAAGATCAACACCAAGACCAA
CAACAACAGCCGTACCAGCACCAACCTACTGTCTAAAATGTCTCTTTTCC
TCTGTTCCCCCAGTTCCGACGTTGTGTACCGTATTCTACACAAGATACCA
CACCCCGTGTTAAGCTTTTTGCATTCCGTATAGCTCCACAACCAGGAGGG
TGCCACTGCCGAAAAGGGTGGTCTTGGAAAGATCTCGTCGAGAGCTTTCG
TATGACGGGCTGTTTGGTGTTCGCACCTTCCTGGTTGTGGAGCAATACGG
AATGCAAAAAACCTAACACGGGGTGTGGTATCTTGTGTAGAGTACGGTAG
GCCAACAGCAGCGCTCGCCGCCAGTGAAGGCTCGGGGACACAGCGCAATA
CCCTTTTGAATCAAACGCAAACCGTTGTCTAATGTACCACGTGCATTTTC
CCCCGAAATTGAAACGTTCGTGTGTTCGACAAACGAACGACCATCACACC
CAGGTGAACTTGCTGGAGATGAGCAACGCGGAGGTGGAGGCGTTCCTCGT
CGGAATGGGGGAGCCGAAATATCGAGCCAAGCAGGTATAAACGGCGTCGT
ACATGATACTGCGGTATCATGTAAATTCGTGTGGATCAAAGTATACCGCC
GTTCGTCGGTAGTCGTTCGTCGGTTTTAACGTGCGAGTATGCGTGAGGGA
AACGACGAAGAAAAAAAGAGGGAAACGTGCCCGAACAAGAATCTTACAGC
AATACCTTTTCGCTCAGAGGAAGTGCCGTGCACGCACCCTGCAGACCATG
TCAAAACACGCTCTTGGTTCGGCCCTCTCCTTCTATTTTATCACGACGTG
TAACGTACCGCGTTGCATGCCATACTGGCACGTATCTCTCGTTCGTTTGT
GACGGACGGGGCGGAAGGCAAGCGAATTTGTGGGGGGGAGGGTGGGGGGG
GGCATTGTACTCTGGGTGTTGTCCCTCCTGCAGAGGTGAAAAATTCACCC
GGGTACGGTGCACCAGGCACCTGGTACTGTGTGGGCCTGGAGCAATGACC
CTCTCTTGCTGGCTCCCTTGCAATGTACCTGGCTCATTGTGTATTGCAGA
TTTTGATGTCTGGAGCTGACGTGTTTCGGCTCCTTGTGCAGAGGCGTTTT
TGTCTCTATTTTTCCATTGCATAGATAGTTGCCGTCCAACCGACCAACCG
CCGCTGACACACGATATGTACACATGTGCTGAACTGGACACTGGAAGCCT
ATCATGGCCCTGCCCCTTTTCTGGCGTCTTGAGGGTGGTGCTTTCGCCTC
ATATTTCATATATTTATGAGTGAAAGTAAAGAGAACAAGAACGCTGCTGT
CACATCGTGGACACAGGTGCTGAAATCGGCATTTTTTGAATATTTTTAAT
ACTCCGTAATTTTTGTAAATAGGAAAAAAAAAGTCAACCAACGGACATTG
CTTTGCACAGGTGCTGAAATGGATATTCGGTGGAGGAGCGGCGTCCTTCG
ACGACATGGCCAACATCCCCAAGGCGCTTAGGGCGAAGCTCGCGAAGGTT
GCCACCGTCGGCGTTCTAGAGGTGCGAAGGACTTGGGCAATTCCTCCCCC
GCCCCCCCCCCCCACGGTCTTCACTCCAATTTACTCGAATCCAATCTTCT
CCCATATCACTTCCATTTCCGGTTTCGTGGTCGTCGTTGTCGTCGTCGTC
GTAGTAGTAGTAGTAGTAGTTGTAGTAGCGGCAGCTACTGAAAATTTATT
TTCGGTATCTTTCTCTCCGTCCCTCTGCTTGTGATACTTCAGAGGATACA
CACACACAAACATGTTACATTTACGAGGTATTCACCTCCAACATAGATTT
GCCACGATCGGTGGAGACAAGTGAAATTACCCTGAGTGAGATGTGTTGGT
GCAACATTTTGTTCCATTGCTGAAACTGATGTCCGTTCGCTCGGCCGACG
CAAAAAAAGGTGGCCGCCAAGCAGGTGAGCAAGGACGGGACGAGGAAGAT
GGCCTACCGCCTGTCGGACGGGCAGGTGATCGAGTCGGTGCTGATGCCCT
ACTCGGACGGGAGGAGGACGGCGTGCATCTCGTCGCAGGCGGGGTGCGCC
ATGGGCTGCGTCTTCTGCGCCACGGGGCAGGTACGTCCTTAGAAAGGTAC
TGCTGTACCTTACAGACAGTACATGCTGTTGTATCATAGCAGCACACCCA
GTGCAGATGATCGCGTGCACCGCGTGCACAGTCAGTCCGTCAGTCCGTCA
GTCCGTCAATCAGTCGGCGAGAAGCGACGGGGGCAGTCAGCCTGTATCCA
CGAGAAGCGTCCCCTATCGGGTGAGTCAGCAGTACGGACATTCGAAGGTA
CTGGTTCCCTATACCCTTATTTTGGATAGGTAGCCCGTGACCACGGGAAT
CGTCCCCTTTCGGGCGAGTCAGCAGTTTACGGACATCAAAAGGTACTGGT
TATCTATACCCTCTTGTTGGGGGGTAGGTAGCCTATGACCACGGGAAGCG
TCCCCTATCGGACGAGTCAGCAGTTTGCGGACATCAGACGGCTTTTCAAT
GGGAAGACAACACACACACATTCGCACACACAATTCCCACTTTGCTCAGA
ATCCTCATCCTCGTGCAAAATCCTTTTTCCCTATAACCTGTATCCTTCTC
CCCATCCTGGCCGCGAACGAACGGGACGAACGGGCTGTGACTTCAGATGG
GGTTCAAGCGCCAGTTGACCTCCGCCGAGATCTTCGAGCAGGCCTACCGT
TTTTCGCAGGAGCTTCAGGCGAGGGGGGATCGACTTTCCAACGTGGTGAG
ATAAATGCCCAAACAAGTGATGAGGTGGCTCGAGAGGTTACATGGTTTTG
AGACGACATCGGACGACGTGAGAGAGATCGGGATGAGATTACATACGATG
ATGATGATGATGTGATGCTGTCGAAAGTATGTACTCCGGAGTATCAGATA
CAAGTACATCATAACTGCAAAATAACGAACCCCAAATCCTGCTGGACAGA
TGATGAACACACACACACACAAATTCTGCGTGCTTCGAACGCCAAAAACA
ACGGGGGGGGGGGGCGGGAGAAGTTTTTAGCAGATAGCTTTTTTGGTTTC
CGATACTCCCCGAGTGCTTTAATTTTTTCAATGTGTTTTTGGGGTAGGTC
GTTTTTCTATGGAACGGTTCCATTCGATTCACTGCAAGTTGTACGGTTTG
TCTGGAGTCACCGACACTGCTGCGCCCCTTTTTTGTGGTCTTGAGTCAGA
GGGACCAAACCTCATGTCATAGCTCCGCAATTTTTCGCCCTCACTTTTTT
TTTTTCTCCTTTTTTTTTTGAAACAATACCGTCGGATTGAAAGGTGTTCA
TGGGCATGGGCGAACCCCTGGCCAACTACAAGAACGTCATGGAAGCCGTG
AACCGCATCAACACCGAGCTGGGCATCGGCGCGAGGCACATCACGATCAG
CACCGTCGGGCTGGTGCCCCGAATCCTCCGGCTCTCGCAGGAGGACATCC
AGGTACTGTACAGAGCCGTACAGCAGCAGTACGAGGCTACGATACTGACA
TGTACAGCAAGTTCGCTGTTTTATCATACGATATGATATGATATGATATG
ATATCATTCCAATCCTCGAAAGGTTTGGTTTCTGTTGGGACTAAAAAAAT
TCCACCAAATAATCTTGTTTAGGAGATCTTGTTTTGGAGATCTTGAAGCG
GTCGTTCAAGTGGTTTTTTTACCCCTGAGATTTTGCCGGCCTGACGCAAC
CTACGCACACGAGCTCGCGGCAGTGCCTCCGCACACACCAGGAGATGAGG
GGCATCTGGCTAAAAAAATGTTTTCAACGATACACACGTCGCCTATCGCC
TTGAACTAGCTTTTGCATTCGAAACGACTTCATCAAACAGTACTCACAGT
CACCAAGTGACCTGATCTCCTGCTGCTGAAGGAGCACACGACACGCGCAC
ACATCATCTGATGCGATGATTTGGAATTAAACGCTTGACCGAACACGGCT
CGAGCTAAGTCCTCGAAGGACAGCACATTAAATCACTCGGTGCCGTCGGC
ATCAGCTTGGGTTTCGCGGGTTCTGGTCAAATCAGCAGGACGAGGAGGCA
ACGTCGTTCACAGATCGCGCTACAGAGTATCATCAAACAAATCAAAGAGA
CAGCAGCAAGAATCTCGGGGCATTTTTCAGGCACACCCTTTTTACAGCAG
TACTGCTGTATCATATCATATGTTTGATACGGCCGACACGATGATTTTGA
ATCAAACGCTTGACCGAACTCGTCTGGAGCTAAAACCTTGAAGGTGAGCA
CCTGCACCAACCGCTTCCGCCGGCTGCGGGTGGTGTTGGCCGTGGGGTGT
AGCGTGTGCTTATCACACGGAAGGTAAGGAGGAGATCGCCATGTCTGTTG
TCTTCACATTTCATATACTTCGAAGTATACGACGTATAATGCACTTGGAT
ATCATCTGCTTCGAAGTATCATACACTGCTGTACATCAAGAAAAAAACAG
CTGGAAAAAAAGGAGGATGGGTTGTGCCGTCGTCCTGCCGATCTGTTGTT
GCACAGCAGCAGCGGCGCCATGTTCACTCGTATCATGGCAGGCACCAGCA
GCAGCACTCGCTCTCCCTCCCTGCCTCTCTTTACCCCTCTACCCCTCTCT
CTCCTAGCCATACACCAGTATACCAGCAGTACAGCAGTAGCTAAGCGGCT
GTTGTGTGAGATGTGTGTGATGATGTACTCTCTGCGCCCACAGCAGCAGA
AGTAGCAGATACCAGGTACAAGTACTACAACTGGAACAAAGGAGAGGACA
AAAAATCAGACAAAGGGCCAATAACAAAAAAAATAAGAAGTAAATAAAGT
CATCAAAACAGAGCCCTCTCTGTCACATCAAGTGTTTCAAATGACTCCAT
CAAACAGTTCTCTCGATGTCATCTGATCTGATCTCCGAAAACCAAAAAAC
AAAAAAAACATCATTTTTTTTTTTTTCATTCGGTAACAAAAGTAAAAGCA
GCAGCAGCAGCAGCAGCAGCAAGCAGCAGTAGCGTTCACACAACCACACC
GACCATACTGCTGCTGGTATGGGCTTTACCCTGCGTTGTGTTGTGGCCCT
CTATTCAACAGGAACCAACACGAGTCACAGAAGGTGGCCTCCAGAAAAAA
TCGCAAAAACAAAATCCTGTTACGCTGTCATGTGTCACTCCGCAGCAGCA
GCAGCAGCACAACAGCAGCTGCAAAATGAAAAACAAGCACACACCTTAGG
CTGCTTATCGTAGCTCGGAAACGCCCTCCTTAGAAAAGGCCTTCATCAAT
AAAAGCATTTCGAACAGGATCTTCGAAAGCACCGCTTCTTATAAAGGAAT
TCCCAACCGCAGTTGATTTTATTTTTTCCATGGGTGACTCATTTGTTTTC
ATGAGTAATGATTGACAGACAGACGGTGTTGACATCGTTTCAACAGGCTA
CTGCTGCTGTAGCGTATTTGTTGATCACTTTCGAATGAATGAAGCCACAG
CAATATCAAAGCCATGCCCCGTAAGCTATGTGTATGGTCGTGCTCCTCCG
ATTGTCGTTTGAGGACGCGAGGCATCAACAGGCTCACAAAAAAGATTGCA
GGGGTCGATGACGTGTGAAAAAAAATAGGAAAAGAGAAGGAAGTCCGCAG
CAGCAGCGGAAGCAGCAATGTATTTTGCGCAGGTACACCAGTTTGGTTTC
TCTTCCATAACTTTCGAACCAATTGAGCCACAGCAATACCAAAGCCATCG
ACCGTGAGCTGTGTGTCTTGTCCCCCTCCCCCGTTGGTAATCTGGGGCCG
GCATCAATAGGCTAACAATCTAGCCGTTGCAGAAACCGATCACTTGTGAA
AAAAGAGAAGAAATCTCCGCCGTCTGTCTGTACTGCTGCACAACGGCCTT
TCTTTCTTCTCAATTTTTTCACAACTCATCGGTTTCTGCAACGCTTCTAT
TGCTAGCCAGTTGATGCCTTGCGGCCTTAGATGGCAAACGGAGGACAAGG
ACCAGAGGCATAGCTCGCGGGCGGTGGCTTTAGTATTGCTGTTGCTCAAT
TGGTTCGAGAGTGATGGATGAAAAACCAAACTCATGTAGCGGCCCAAAAT
ACAAAATACCTGCTGCTGCTGCTGCTGATTGCTGCGGCTCCCCCCCATGC
CCGCTCTCCGTCACCCCACACTTCTTTAGACTTTCGTCGATTGCTCTCGA
ACGAATGAACCCACGGCAGCAACAAAGCAATCGCCCTTGAGCTGTGTGTC
TGGTCCCTCTCCTCCGTAGGTCATCTGGGGCCGCGAGGTATCGATAGGCT
TGCGAAATAATACTGCTGTAGTTGTTCAAGTCACCCGACTCATTGTGAGA
GGCTGTGTGCTGTGTGAGGGAGGGCCCAAACTTTTCCAATAAGCGTTTTC
TGATCGATGGAATCGCCTAGAAAAAATGATTTTTCTGAGCGATTGGATCG
ATCAGAAAAAGTTAGTAGAAAGTTGAGGTAAAAAAAGGTGGTTTTTCCAT
CTACAACAAGTTGTCAAACCGCCCAAGATCAAAAAAGACCTTTTCTAAGG
AGGGTTTTTGCAGCTATAATAAGTAGTCTTACAGCAGTATTCTCAAAAAC
ACACTTGATCGAATGAATTTCGGGCTAAAACTTCGAAGGTAGCCACTCCA
TTCGCTGCTCACACCGTCGCCATCGGCTTTGGTTTCGCGTATCATATGAT
ATTTGGGTGCAATCAGCAGCAAGCGACGTCGGTAACACAACAGATAGGTA
AACTCTGCTGTAGCGTTGCGATAGAATCCACACAAAAAAGATGATCTTTT
TCATTTTTTTTTTGTCGTGGAGTAAAGAGTGTAAATTAGTGGCAGCATTC
ACACAACCACACCGACCATACTGCTGCTGCTTTACAGCTGTACCTCAGAC
ACAGACATAGACGAGCGACAGTATATAGTACAAGTACATATCGCTGCTGT
ACTGCTGTGTACCGGAGAGAGGGGTATACATCGCACACCCTTCTTCGGTT
GTTGTTGCTTTGTTGCAAGAGGAGAAGGAGCAGCCACATTCCAATCCTTC
CTTGTTGGTTTCTGTTGGGACTACTGTGTAAACATTCCAGGGCTTGGTTT
CTGTTGGGACTAAAAAAAATTCCAGGGCTCCGCGCTGTCAGGGCCGGGAT
GGGAAATAGTACGGGAACGGGAACGGGAACGGCAATAATGCCGTACCGTT
ACCACCAGCGATATTTCATTCCCGTCCGAGCGTTTCCGACGACCTCTCCC
GTTGCTAGTTTCTGTTCCCACTTTTATTTCCCGTCCCACCGCGACATACT
GCTCCCGTCCTTCTCTCTTCCGGTGCCACCATCTGCCCACTCTCTTCCCA
TCCCATTCCCGACTTTGGCATTCTTCTGTCTCCCGCCGTCCAGCATCCCA
CTGGCTGTCCACTCACTTACCATCCCATTGTTCCCGATGATTGTATATTC
CATTCTCCCATCCCACATTCGACTGCGGCATGATTCATCTCCTCCACAGC
TGAGTATAGTTTCTCCCATGATTGAGTTTCTCCCATCATCGGTATAGTAC
GCGACACTCATCATAGATAAGAAATCCAGCCTGAGATTTTTTTTTGATTT
AAGCATTTGTACAGGTGGGCAGTTGTGCTCAGTCTAGCATCCTACGCTTA
TAAAACCTATAATGAATGGCTGTTGGGTTACGCCCACAGCAGAAATAAGC
CGCGAGCCTCAGCCAAAATATGATGGGAGTTCCTTGTCACGACATTGTGT
CGCGTGCTGTGCAGCAGTCCAACAAAAAACTGAAACCAACGCAAGAAATG
CTGACACAAAGCCAAGTTTGCATTGTGTATGTATGTGATATGATTTAGAG
TTCGTTATATCAAAAACCCCTTGATTCCGGGCTCTTGATACCCGACCTCC
TCCTCCTCCTCCCACTACAAATACTACGACAACTGCTGTACAGCAGGTAC
CGGCCCGCAAGCAGGAATCAAATGAAATGCTTGGTAAGAAGATAAGGCTG
AGATTCGTGAAAGTGAAGAAATTCGGCGTAAGAAAATCGGCTCAGCGGCC
AGCCACACGCTGAATCCTACTTCGAAGTACTTGTATCTACGAAACGGTGT
GCTCTCGTGGTGCTCACAAAACAAGAGACCCAGCCTCAGGCCGATATTAG
ACAGTTTCGTACCACTGCTTGCGGGCCGGTACTGCTGTACTGCTGCTGTG
CTGTGGTCCCCCTGAATAAGAAAGAAGGAGGAAATACTACGTACAAAAAA
AAATACGTGTAGGTATAGTACTTCTCTGTGTGTGGTCTGATAGTAATATG
ATATGATGTACTACGGCAGATCAGACCCCTTATTTATCCCAGCCGCGGGT
AGCGGGGCTACAATAAAACCCGCTCTTTCTTGCTGCTGTGTGTGGCAGAT
AGATATCAAAAACTAAAAAAAAAGATTGGAGGCCGACCTGAAAAGGGCAA
TTATATCATATATCATATGATATCGTATCATACCGTTTTGCCGTTGGACG
GATGTGCTCGCGTTTTTTTTTTTTTTTTTGTCGTGGCGTGTTCTCTGATG
GCTTTCTCCCCGTCCCCCTCCTTCCTACCCGCGGTAGGTTAAGCTAGCCG
TGAGTCTGCACGCCGCCAACGACCGCGAGCGTAGCGCCCTCCTCCCGGTG
AACCGGCGCTTTCCGCTGTCGGAGCTGATGGAGGCTTGCCGGGAGTACGT
GGACGTGTCGGGGAGGCGGATGACCTTCGAGTGGGCGCTCATCCAGGGGG
AGAACGACAGCGCCGAGGTGTGTTGCTATTGTTCGTTGTTCGTTGTTCGT
TGTTTTGTGTTGGTGTTGGGTTGTTGTTGCTGTTGTTGTTGTTGTTGCTG
TTGTTTTTGCTGCTGCTGTTGCTGTTGTTGTTGTTGTTGCTGTTGTTTTT
GCTGCTGCTGCTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTGGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTCCTTGTTGTTCCTTGTTGTTC
CTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGGTCTTCGTTGTTTGGTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTCTTGTTGTTGT
TGTTCTTGTTTTTGTTGTTGTTGTTGTTGTGTTGCTGGTGGGGGGGTTTT
GGCTGTGGGGGTGGGGGGTGGGGGGTGGCGGTGGTGGTGGTCTTTTTTGT
TTTGTTGCCTTTGTCGCTGCTGCTTTTGCTGCTGCTGCTAGTCGGTGTGT
TGTCAATTGATTGGTTTTGTTACATTTCTGCAGCTGTTTTTGTTTTCACC
GTCTTGTGGTGCTGACGGTGTTTTTTTTGTTGTTTCACCCCCATCATATC
ATATGATATCACACGCCGTTGTCTTCGTTATTTTGTGCTGTTGACCTGAC
CGGAATGTAAACCACGCTCGACAAATATCCACGAAAGGTGGCCTCGGAGC
TAGGAAGGCTGCTGCGGCCGCTCAAGGGCATGTGCCACGTCAACATCATC
CCGCTGAACCCCACCGCGGGGTACAAGGGGGGCCCGTCGATGGCGGAAGC
GGTGAATCAGTTCGTGGACGTCCTGGCTAGGAACGGGGTTCCGGCAACAC
CGAGGCAAGAGCACGCTTCGAAAGATAAATTCTACTTCGTCCCAACTAAC
AAATACCATCTATACGAAGTACGGACATTTGGGGGTACTGGGGAGAGATG
GGAATGGTTTTTAATGTGAAGACAACACACACCCAAAGGAAATAGACAAC
GTTTGATGGGTGGCTCCTTCAAGGAGAGGGGCTGATGGACTGGCGCGGGT
AAGAGGTGACAACGAGCAAACGGATAGCGCATTGCTCGGGAAGAAATGAC
ATTTATGCGAAACGGCCTCGATCTCTTTGGGTGCCTTTTTGACCGTTTTC
ATGCTTCTTCGAAGTAATGAGCACGTGGAGTTGTCTAATTTTGGCGTCGA
AATTCAAGATCTGCATAAAGTACAACATGTACAAGCATGTACATACAGAA
ATGGAGTTAATTTGCTGCATTGTTGTTTTTCTAGCACCTACACTCCAAAC
GTGAGGTACTAACAAGTTTCTGTTGTGTGTGTGCGTGTGCGTGTGTGCGT
GTTTTTTTTGCTCGCAGGATACGGCGAGGGATCGACATCGATGCCGGCTG
CGGACAGCTTACCGTTAAAGTCGCCCAGGACGACGTCCTAGGAAAGGGAT
TGTAACAACCTTTGAGGCAGGCGCTTCTTGCCGAAGTCAAAGCTGTAGCA
CTATCTGTGTAGCGTAGATGAGACTGCGGAAAGTGCCCAGGGCAGGGCAA
AGGAGACCACCGCACTCCAAGCGCGCGGGCCATCACACGATAATAAGCGC
AAGGGCGCACTCGCAACCTCGGGCGTCGCGCCGTGTGTGTCGGCCGAGTA
GTGGCGTTTTGCTGATGCAGGGCGGGGGGTGGAGGTGCGAGGACACGCTG
TCGTACAGCGGGAGATAAGTACTTCGTGCTTTGCTGTGGCGTGTCGAGGG
GCCTACGAGATTCTCGGCCACACGGCGATTTTTTATTACAGACAGCATGA
TGGTTTTTCCGCCAACACGATCCGGTTGGTTGACCGTAGACGCGAGACGC
ACGTACGTGTGCATCGATCGTTTCATACCCACGTAGCAAGCGGCGACGCG
GCGCTACTACCGACACTGTAACGGCTTTCTCCGGCTTAAACAAACACCTA
CTGAGGCTTGGCAACCGCACGCAGAGAAAACGGGACCTTTTGTCACCGGT
ACCTCTCCATCCCTGTACTCTCGAACTCTTTGTCGTTCGGACCAGCTTGT
GTTGGTATTTGGGCACAAGAACGGGCTTGGCCTCTGTCGTGTGGTATCGG
ATAAGTTGTCTTTCTGAACGGTTTGTACGTACGTATACGTGTGTGTACGT
ATTGTGCCTACCGACGACACATCTTGCGCGTGTGGTCACGAAAAATAATA
CGGTACCTCCTAGCCCAGATGAAATGATAATTGCCCCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig63:358434..370322+

>mRNA_P-littoralis_Contig63.70.3 ID=mRNA_P-littoralis_Contig63.70.3|Name=mRNA_P-littoralis_Contig63.70.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1041bp|location=Sequence derived from alignment at P-littoralis_Contig63:358434..370322+ (Pylaiella littoralis U1_48)
ATGAGCAACGCGGAGGTGGAGGCGTTCCTCGTCGGAATGGGGGAGCCGAA
ATATCGAGCCAAGCAGGTGCTGAAATGGATATTCGGTGGAGGAGCGGCGT
CCTTCGACGACATGGCCAACATCCCCAAGGCGCTTAGGGCGAAGCTCGCG
AAGGTTGCCACCGTCGGCGTTCTAGAGGTGGCCGCCAAGCAGGTGAGCAA
GGACGGGACGAGGAAGATGGCCTACCGCCTGTCGGACGGGCAGGTGATCG
AGTCGGTGCTGATGCCCTACTCGGACGGGAGGAGGACGGCGTGCATCTCG
TCGCAGGCGGGGTGCGCCATGGGCTGCGTCTTCTGCGCCACGGGGCAGAT
GGGGTTCAAGCGCCAGTTGACCTCCGCCGAGATCTTCGAGCAGGCCTACC
GTTTTTCGCAGGAGCTTCAGGCGAGGGGGGATCGACTTTCCAACGTGGTG
TTCATGGGCATGGGCGAACCCCTGGCCAACTACAAGAACGTCATGGAAGC
CGTGAACCGCATCAACACCGAGCTGGGCATCGGCGCGAGGCACATCACGA
TCAGCACCGTCGGGCTGGTGCCCCGAATCCTCCGGCTCTCGCAGGAGGAC
ATCCAGGTTAAGCTAGCCGTGAGTCTGCACGCCGCCAACGACCGCGAGCG
TAGCGCCCTCCTCCCGGTGAACCGGCGCTTTCCGCTGTCGGAGCTGATGG
AGGCTTGCCGGGAGTACGTGGACGTGTCGGGGAGGCGGATGACCTTCGAG
TGGGCGCTCATCCAGGGGGAGAACGACAGCGCCGAGGTGGCCTCGGAGCT
AGGAAGGCTGCTGCGGCCGCTCAAGGGCATGTGCCACGTCAACATCATCC
CGCTGAACCCCACCGCGGGGTACAAGGGGGGCCCGTCGATGGCGGAAGCG
GTGAATCAGTTCGTGGACGTCCTGGCTAGGAACGGGGTTCCGGCAACACC
GAGGATACGGCGAGGGATCGACATCGATGCCGGCTGCGGACAGCTTACCG
TTAAAGTCGCCCAGGACGACGTCCTAGGAAAGGGATTGTAA
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