prot_P-littoralis_Contig63.43.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig63.43.1
Unique Name	prot_P-littoralis_Contig63.43.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	273

Homology

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BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot
Match: D7FI48_ECTSI (Nascent polypeptide associated complex alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI48_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 3.780e-44
Identity = 123/213 (57.75%), Postives = 136/213 (63.85%), Query Frame = 0

Query:   52 EMDELLILLEQKDSDLRRAAELGKMLLDEKEADAEAHEGEKEALWRRIQDMARRVMELEQEAAESRDELSLYLDRSGRQALPAVASTAATEGRMNRRMSIGGGGXSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARFSRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAF--SVVLGPLSPTGSC-SPGPVPSATVA 261
            ++DELLILLEQKDSDLR+AAELGKMLLDEKEA AEAHEGEKEALWRRIQDMARRVMELEQEAAESRDE SL  D   R+   A A                   X   DRAEERALRAKNE+LERQL HM+EEAEE QLELAAA+K+                    SPA S+RL  G+  L+G    +    PLSP GS  SP  +P    A
Sbjct:   22 DVDELLILLEQKDSDLRKAAELGKMLLDEKEAAAEAHEGEKEALWRRIQDMARRVMELEQEAAESRDEFSLQQDEHARRLALAGAQRGXXXXXXXXXXXXX---XXXXDRAEERALRAKNEMLERQLAHMREEAEETQLELAAARKS--------------------SPALSARLERGDGSLNGGGFGAAPPRPLSPAGSSFSPSRLPEVVAA 211

[Close]

BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot
Match: A0A6H5J6R4_9PHAE (NAC-A/B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R4_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.320e-27
Identity = 92/164 (56.10%), Postives = 107/164 (65.24%), Query Frame = 0

Query:  102 MARRVMELEQEAAESRDELSLYLDRSGRQ-ALPAVASTAATEGRMNRRMSIGGGGXSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARFSRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAF--SVVLGPLSPTGSC-SPGPVPSATVA 261
            MARRVMELEQEAAESRDELSL  D   R+ AL         E   +RR+S GGGG    DRAEERALRAKNE+LERQL HM+EEAEE QLELAAA+KARFS  SS + + G    + +SPA S+RL  G+  L+G    +    PLSP GS  SP  +P    A
Sbjct:    1 MARRVMELEQEAAESRDELSLQQDEHARRLALAGAQRGGGGEFNSSRRVSHGGGG----DRAEERALRAKNEMLERQLAHMREEAEETQLELAAARKARFSTWSSRRLTRGRSESLQSSPALSARLERGDGSLNGGGVGAAPPRPLSPAGSSFSPSRLPEVLAA 160

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FI48_ECTSI	3.780e-44	57.75	Nascent polypeptide associated complex alpha n=1 T...	[more]
A0A6H5J6R4_9PHAE	1.320e-27	56.10	NAC-A/B domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..126
None	No IPR available	COILS	Coil	Coil	coord: 164..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..273

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig63	contig	P-littoralis_Contig63:215055..229185 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig63.43.1	mRNA_P-littoralis_Contig63.43.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig63 215054..229185 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig63.43.1 ID=prot_P-littoralis_Contig63.43.1|Name=mRNA_P-littoralis_Contig63.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=273bp
LGYSCVLSGILLRHPSRRSPGVPAAAKRGQQRSRKEMMANAHVGGESSTG
GEMDELLILLEQKDSDLRRAAELGKMLLDEKEADAEAHEGEKEALWRRIQ
DMARRVMELEQEAAESRDELSLYLDRSGRQALPAVASTAATEGRMNRRMS
IGGGGGSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARF
SRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAFSVVLGPLSPTGSC
SPGPVPSATVAAAADGGGGGCST