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Homology
BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot
Match: D7FI48_ECTSI (Nascent polypeptide associated complex alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI48_ECTSI) HSP 1 Score: 169 bits (427), Expect = 3.780e-44 Identity = 123/213 (57.75%), Postives = 136/213 (63.85%), Query Frame = 1
Query: 154 EMDELLILLEQKDSDLRRAAELGKMLLDEKEADAEAHEGEKEALWRRIQDMARRVMELEQEAAESRDELSLYLDRSGRQALPAVASTAATEGRMNRRMSIGGGGXSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARFSRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAF--SVVLGPLSPTGSC-SPGPVPSATVA 783
++DELLILLEQKDSDLR+AAELGKMLLDEKEA AEAHEGEKEALWRRIQDMARRVMELEQEAAESRDE SL D R+ A A X DRAEERALRAKNE+LERQL HM+EEAEE QLELAAA+K+ SPA S+RL G+ L+G + PLSP GS SP +P A
Sbjct: 22 DVDELLILLEQKDSDLRKAAELGKMLLDEKEAAAEAHEGEKEALWRRIQDMARRVMELEQEAAESRDEFSLQQDEHARRLALAGAQRGXXXXXXXXXXXXX---XXXXDRAEERALRAKNEMLERQLAHMREEAEETQLELAAARKS--------------------SPALSARLERGDGSLNGGGFGAAPPRPLSPAGSSFSPSRLPEVVAA 211
BLAST of mRNA_P-littoralis_Contig63.43.1 vs. uniprot
Match: A0A6H5J6R4_9PHAE (NAC-A/B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R4_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.320e-27 Identity = 92/164 (56.10%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 304 MARRVMELEQEAAESRDELSLYLDRSGRQ-ALPAVASTAATEGRMNRRMSIGGGGXSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARFSRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAF--SVVLGPLSPTGSC-SPGPVPSATVA 783
MARRVMELEQEAAESRDELSL D R+ AL E +RR+S GGGG DRAEERALRAKNE+LERQL HM+EEAEE QLELAAA+KARFS SS + + G + +SPA S+RL G+ L+G + PLSP GS SP +P A
Sbjct: 1 MARRVMELEQEAAESRDELSLQQDEHARRLALAGAQRGGGGEFNSSRRVSHGGGG----DRAEERALRAKNEMLERQLAHMREEAEETQLELAAARKARFSTWSSRRLTRGRSESLQSSPALSARLERGDGSLNGGGVGAAPPRPLSPAGSSFSPSRLPEVLAA 160
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D7FI48 |
| Preferred name | NACAD |
| PFAMs | NAC |
| Model size | 820 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00672 |
| KEGG ko | ko:K03626,ko:K10659,ko:K15730 |
| KEGG Reaction | R02265 |
| KEGG Pathway | ko00590,ko01100,map00590,map01100 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 4 |
| Evalue | 6.19e-45 |
| EggNOG OGs | COG1308@1|root,KOG2239@2759|Eukaryota |
| EC | 2.3.2.27,5.3.99.3 |
| Description | protein transport |
| Cds size | 819 |
| COG category | K |
| BRITE | ko00000,ko00001,ko01000,ko04121 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791312.171304-CDS-P-littoralis_Contig63:215054..215282 | 1680791312.171304-CDS-P-littoralis_Contig63:215054..215282 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 215055..215282 - |
| 1680791312.187328-CDS-P-littoralis_Contig63:215776..216067 | 1680791312.187328-CDS-P-littoralis_Contig63:215776..216067 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 215777..216067 - |
| 1680791312.1986878-CDS-P-littoralis_Contig63:216912..216992 | 1680791312.1986878-CDS-P-littoralis_Contig63:216912..216992 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 216913..216992 - |
| 1680791312.2133968-CDS-P-littoralis_Contig63:228965..229185 | 1680791312.2133968-CDS-P-littoralis_Contig63:228965..229185 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 228966..229185 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig63.43.1 >prot_P-littoralis_Contig63.43.1 ID=prot_P-littoralis_Contig63.43.1|Name=mRNA_P-littoralis_Contig63.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=273bp
LGYSCVLSGILLRHPSRRSPGVPAAAKRGQQRSRKEMMANAHVGGESSTG
GEMDELLILLEQKDSDLRRAAELGKMLLDEKEADAEAHEGEKEALWRRIQ
DMARRVMELEQEAAESRDELSLYLDRSGRQALPAVASTAATEGRMNRRMS
IGGGGGSGGDRAEERALRAKNELLERQLVHMKEEAEERQLELAAAQKARF
SRRSSLQHSHGGRSYVLNSPAPSSRLGGGERGLSGAFSVVLGPLSPTGSC
SPGPVPSATVAAAADGGGGGCST back to topmRNA from alignment at P-littoralis_Contig63:215054..229185- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig63.43.1 ID=mRNA_P-littoralis_Contig63.43.1|Name=mRNA_P-littoralis_Contig63.43.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14132bp|location=Sequence derived from alignment at P-littoralis_Contig63:215054..229185- (Pylaiella littoralis U1_48)
TTGGGCTACAGCTGTGTGCTCTCTGGGATCCTGCTGCGACATCCATCAAG
AAGAAGCCCAGGAGTACCAGCAGCAGCCAAGAGAGGGCAGCAACGATCAC
GAAAAGAGATGATGGCGAACGCTCACGTCGGCGGCGAATCGTCTACCGGG
GGAGAGATGGACGAGCTTCTTATCCTGCTGGAGCAGAAGGACTCAGACCT
GAGGCGGGCGGCAGAGCTCGGTACGTGTGTGGTGTGGTAGGATTGTGCTC
AGCAGCGCCCTCACAGCACCTATGTGGTCGTATGATACATGGTTGCTCAA
CAATGTCACAACCGCGTTGGATAGATCGTCAAGCACCAGACAGACGGAGA
GAAAAACCTTGAAACCTCTTTTCGGACTCCCTCCGTGTCCCGGAGGCGAT
TGCACAACAATTTTTCGCTCTGTGTGGGCGGATTACGACAAAAGTAGTTC
AAGGTTATCATCTCACATCGTATATGATACTTGAGTCTCCTCATCATGTA
TCTGTCTGCTGTAACATGTACAGCAAGCAGTGGGTGCACCTGAGAGGGCA
TTGACCGATCGGACATCGCAGCGACAGAGATGCGTGCTACATAGATCTGG
CAACCACGAAACACATCGACCGGCAGTATAGTTACTTCCAGACCGCCAGA
CCACCACTTTCGCTGGTTCGCCGTCAGGGTGCAGATCAATTTTCGCGCCA
AATGACCCCATCCTCATCGCTCCACCTGGAATTTTTTGAATGGTACAGTA
CTACAGCAATAGCTGTTGGATTGCTTCGTCAGGGTGTGACCTACCGGTGG
TCATATGATGTCTGGTACGCATACCCCGGAACTATTTCTCCTTTATACTC
GGAGTACGAAGTACTTCGAAGTATCTTCGAAGTACGTATGATATGATATG
TACTTCGAAGTACGAAGTACCAGATACTTGCATTGCAATACGAACGCACT
TCGTATGATACGTACGATATTAATACTCCGAATTCTCGTGTTTCTATCTA
TGATACGCACATACATAGTCCCTTCGTGTTGTTGTTGTTGTTGTTTCTCA
CATTAGCTCTTTTCTAGTATCTAGCGCCCGCGGTCACACCAAATGCTGGA
GCCATAGGAAGATCCGAAGAACACAGAAATCTAACAGAAGAGCGCCTACG
CACGTCGAAGGAAGGCACTTCTTTGGACGTATTGTCCCTGTGTCCAGACT
ACTGAACTACGCACCACGGACAATCCTTCGGCTACAGCAGTCACCCCCGA
TCCCAATCCCTCCTCCAACCAACTCTCGGCTGCTGGCTACAGTAGTCCCT
TCGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTC
TCACATTAAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGG
CACATATCGTCCTAGGAGGGAAAAAGAAAAAGAAAATAAATGGACTATGA
TCACCCACAGCAAAAAGGGTACCGTTGGGGTACCATCTATGGTGTCCAAA
GTACCAAACAAAATACTTCGAAGTACAGAAAAAGACAAACCTAAACCATA
ACCGTTAACATATTCCGAAGTACTTCGTACGGAGTACATCGAATCAAGAC
CCAGGGCCATGACAGACTAAGGCAAAGCCAAACCAGGGCACATGGTTTAG
TAACTGCATGATCAAGAGACGAAAGACAAAATTGAAGAAGATACAGGGAG
GGCACAAAGACTGAGGGAGTCCACTCGAACAGAAACACAACAAGCAGACC
GCAAACAAAGAGGAAGCAGGGGAATGAAAAGGGAAAAAAGAAGAGACAGA
GAGGAACAAGACACATACTGTACACGTGTATAATATACGAGTACGAAGTA
CAAAGTATATGATACGACGACACAAGTATCGTTTTCAATCCGTACTCCGG
ACCTACCAAGGTCAGTGCTTCGCGGTAGGTGTTCTTCCAGGATTTGGGAA
ATCGGGTCGAAATCGCTTTTGGGACTGCTGTGCAAGCCTTAACCCTTTGA
CCCCCCCAGGGGTCTGAAAAGAAAAAACATGTAGCCAAAAATTAACTGAT
TCCGGTGCGAGAATGGTGGACAGTCTAAAAAATAAAACACACTGACGTCT
CGCTGGCTCTGTCCGCTGAAAAGGGTGTGACTTGGTTATACACAGAAATC
TGTCCCCAATTTGCCCTGAAAAAATGGGGACATTCCAGTCTAAAGCTACA
GCAGTATACCAAACTTTTTTGGGGGGGTCAACTACTCCCATACACAAAAG
TCGTTTGTTTAGTTTTACAGGAGGTTGCTTTAAGGGTTCCCTGACAACCG
ATCGTCGAGAGGCACGGATTTTGAAAAATAGTGAACGGGCCCTGACACTC
AACCACTGGGTACCTCACACCAGTAGGAAGGTGTCGGGAAAGAGGAAAAC
GGTTGGTTATCGCACACGGCGGCGGCGGGGGCTCCTCTTGACATGCATAT
CACTGTCTACCTCCAATCTCTTACATAAATATTAAGACAAAAATTGTAAC
GACTCTAAAATCAAGTCAAAAGAGCTTATTTTGATAAGGCTTAATAACCC
TTTGACCCCCCAGGGGTCTGAAAAAAAATAATCATGGAGCCAATAATTAA
CCGATTTCGGTGCACCGATGATTGGCGAATGGTCGACAGTCTCAAAAAAA
AAAAGTACTGATGATGTCTCGCTGACTCCCTGCTCTCTCCGGGTGAAAAA
AGGGGTGTGACTTCATTATACACAGAAATCTGTCCCCAATTTGCCCTGAA
AAAAATGGGGACAGATTTCAGTCTAAAGCTAGACCAAACTTTTTTGGGGG
GGTCAACTACACAAAAGTTGTTTGTTTAGTTTTACAGGATGTTGCTTCAA
AGGGATACCGCTGTATGCAAGGTAGCACGCAGCAATACCGCCACTTAGCA
TGGCAGATCAGGGTACCCCGCTCGACAACCACACAGGGTTCCACTCCGCA
GCATTCATTCAGGGTCTACAGCATCTCATCAGCAGCAGCAGCAAGCAGCA
GCTGCACTAGCCTCTGAAGTCAAACATATCATCATGTTGCATGTGATCAA
CGCAAGGGTGGCGGCATGTAATGATACCCATGTGATGATACTCGTACGAG
ATCGCCGGGTAAGTTTATGAGCTTTCAAACGTGCGTGGCGCGATGTGTCT
GTTTGTAGTGTCAGCCCCCGTGTGCGTGGTGTGTGCCTCACCAACCCACC
GCACGACGCATCATCAGCTAGCTGCTTGCTGCAGCATGCACACAGCAGCA
GCAGAAGCAGAGTACAATAATAGTTGCAGAAATCAGGGTATGTATGTGAG
TGCAGCAGTACGTCAGCATCATCAGCGTTTCATAGGAGCGGTACAGTAGT
ACCAGGTATAACATAGTCTATGTATCATGTCTTATGTGTATGTGTGCATG
TTGTGTGCAATGCAGCAAGGAGGGTTGCCGGCATGAAGTAAGTGTGATAC
AAGATGATCGCCGTTGTGTCTACTATGCTGTCGGGCGCGCTTGCTCTCCC
ATAATAATAATAAAAAACTAAATGTGGCACCGAGGCAGCCAACGATTGGT
CGATCCATACACATTCCATCCACGGAACCACTCCCAAAATACCTGTAGAT
AGGCGCCTTCAAAACCCAAGTCACAAAAAAAAAACAGGTGTCCCCAAATT
GTCTCCAATTAGGATTGAGGGATTCAAAGGGTTAAACATGGGCTGTCGTC
TGTGCGTACCTGATAACAAGGATTAAATCAGGAGAAGACGTAATTGTAAG
TAGCTACAATACGTCGGCGCATTCAGAACTGCTGCTGGGGCTTAGATATC
GATGGTCGCAGTAGAGGATCAAAAACTCCGCAAAATGGACAGATTCCAAA
AATCATCTTCCACTACTGTGCTATCTCCCACTGTTGTACTCGACGCCACA
TACCCTAACCTCCAAAACTACGGGTCAACAGCAGTAGCCCATGCCAATAG
CTACCTCGGACGAACCGCAGTTCAGAAGATTGATGCCGATGGCGGCGAGT
ACAGCTGCGTCAAACGTTTAGCGTCAGTCCGGATTGCGGAGTTTTTCAGG
GATCTTGCGGAGTTCTTGTGCCAATGCTGCGAACTTCGATAACTGAGCCC
CAGTAGAAGATCTGAATGCGCCGACGTGAAGCTACTTCATGACGTCTTCT
CCTGATTTAATCCTTGTTATCGGGTACGCACAGACGACAGCCCATGTTTA
AGCCTTATAAAAATAAGCTCTTTTGACTTGATTTTAGACTCGTTGCAATT
TTAATATCTGTATCATATGCTCGCATATGTATGGTACCCTCGCTTATATG
ATACCTGTTGCAATGTTCCTGCTTTCACTCTCATATGCTAGAATACTTAC
GATGCGCTTGCTCATAGGACACCCGCTGCGATTTTATTGCTTGGCATATG
GTACCCTCGATACCTGCTGCGATTTTACTGCTTTACACATGCTACCCTCA
GCGTGTATCTCAAAATCTCTCTCTAGTATCTGCCACCGGTATGATACCTC
GTCTATGCACGCTGCTATATCATGTTTCGTAGGCGTGTCACTATGTCTCC
ATCACCTGCTACGTTGATACCTCAGTGTATCTTGATATTTCATTATCATA
TGCTCGCGGCTGCTCGTGTCATACCCTCTCCGCCGACATGGGATACCTCG
TAGGCGTAACCGCGTTTTCAATCACATCCTGTATTATTTCCTTGCTGCAG
CCATCACAAATGGCATACGATTACCACTGAGCTGTGGTTTTCTTCTTGGT
GCAACTACAATTACCCTGCCATATGACTTACAGTCGCTGTGTGAGCAGTG
TTTCCTTCCTGCCTCAGCCATAACCTTAATTTTGAGTTGCCACAGCCACC
ACACGACCGGGGTCGTCTTTCGTTCTTGCCGCAGCCGTCGTCTGCAATGA
TTTTGCGCAGCCGTCACAAATGCGCTGTCTGTTTCTCGCCGCAGTGAGCG
CTGCCGCAGCCGCTACTTCGTTGTTGGTTTCTTCCCTTGCCGCTGTCACC
AATCTGACCGGTTGCTTTACTTGTTGCTTCCTTTCTTGCCGCAGCCATCG
TGTGAGATGCTTTTACCACAGCCGACGCACTTTAGCTGTGCTTTTCCTCT
TGCCGCGGCCAAATCATGAAATGGGCACGCCGCAGCCGCGCTTTTCGTTT
CCAACCGTCTGTTTCTTGCCGCAGCCATGAATGAGATGACTTTACAGCAG
CCATCACATACGCTGTTGTTTATTTCTTTCCCGCCGTACCCATCAGATGA
GAGGTTTGCCACAGCCACAAATGCGCTGTCTTCTTTATGACCAGTTGCTA
GACCGGTCCCCTTTTCTTGCCGTGCCCATCATATGATACGAATTGGGTTT
GCCAAAGCCACAAACGCGCTCTTTCTTTAATTTCTTGCCGCACCCGTCAA
ATGAGAAGGGGTCGCCACAGTCACAAAATGCGCTGCTTGTTTCATCGCCG
GTTGTTGCTTCCTTGCTTGCCGCACCCATCAAATGAGATGGGTTTGCCAC
AGCCACAAATGCGCTGCTCGTTCAATGCCCGGTTGCTTGACCGGTTCCTG
TCTTGCCGCACCCATCATACGTATGTATTTTGTCACCATAACGTGGATCA
TTTCATGTAAGTAATGGATTGGATTAGGTCTCCTGCGCCGGCAGGAGGTC
CCTCTAGTATGTCCCCCCGCGCTGAGGCTATTAGCCTCATACTCCCGTAG
CCTCAGCGCAGGGATAATACCAGTAAATGATCCTCGTATGAAATTCTAAA
TACTTTTGGGTGGAGGGGATGGTCTCAAGAATTTTTTGCGACCCACCCCT
AGCTCCCGAGGCTTGGGGAGCGGAACAAGAGACAAGTGACCTTGATGGTA
CAGCAACCAAGACATTTTTGGATCTTTTATCTGGTTCCGAAATTTCTGTG
ACATTCCTGTCCGTTTGTCAGATCCAAATTTTACGTATGTATTCTGTCAC
CATACCGTGGATCATTTCATGTAAGTATTGGATTGGATAAGGCCTCCTGC
GCCGGCCTGTGGTCTCGCCCATACTTCTCTCATCGTTGGATTGTACATGT
TATTGACCACTCGGCCAACGCCAGGTTAACTCACCCAAACTTTCTTAAAA
CGAATACTGTCTCATGATCTATTACCGTCGCGCACAAGCCGCGAAATCGT
GCTCAAAGGCCGGTGACAAAGGAAGCTCGTTCGCTCCTACGTCACTTGCT
GCCCGAGCCCGCTTGAAGCCCCCCAGAGCTCCGCTGGGGGTAGACCCAAT
ATAGTACTTGGCTATCGACTCGGTTTTCCAACCCCCAATTTTCATGATCT
CGTCTGCGGCCGTCCCGGCCAGGGATTTGGTAAGAGAACCCCCTTCTCGG
AAGGAGTGCATCGTGAAATGGGTCGGCAACCTTGCTTGCTTCAAGTGCCC
CTGCAGGGCAGCTGTCATGCGTGTCGCTGAGAGGGTCAGGTTGCCCCTGC
TTCCATCCTCCTGAACAACGGGGAAAAGGTATCGGGCGGACAAGTCCCAA
CCAACTCGCTGGGCTGTGCAAATGTAGGACATGACTGCACGGACCGCGCA
CAGCTCGGGGCACTCAGAGTCTGCCAACACTACGACAGACTCGTTAGAGG
CTCGGATAGTTTTCCCAAACAAGAAGTTGAAAATCAACCCTCTGGACTCC
GGGAGCCGCAGGACCTGGGACCCCAACGTGAATGACAGATCAAAGCCCCT
ACGCATCGAAAAGAAAGCCGGGGCGCACAGAGCGACGTCTCGAGTCAAAG
AGATGCGTTCGGCCAAAGTGACTCCCGACTGCGCGCGCGACCTCATATCA
CTCAAATATCGACAAGCGTGTCAGCGAGCAATGGTGCAGCCTGGTGAACG
GGGATCCCCACCTGTTTCTGCTCTTCGGACACGAAAATGAGGTACGAGCC
CACAAGCGGGCTAGCGCACGGGTTGCCCGTGCGGCGAAGCGGATCCCATT
CCTCCCCTTTACCGCTGTCTTTCATGAACGTTTTAAGCCTCGAGATAAAT
CCGGTGCGGATGGAGTCGGCGGCATACCGTTTAGCGCAACCGGACCCCGC
AAGACAGGCACTACTACCCGCAGAGCCCACGCCCGGGCAAGAGCGCACAT
GCACTGTTTTGATACCCTTACCCTGAGTATCAACAAAGCAGAGAAAATCA
AACACGTCGTCTTGGGTGGCCTGTTGCCACCAGCGAGCTCCCTCGGAGGC
GGCCAACACAAACGCGTCAAATTCATCGGCAACCCTATGTTCGCGCACTT
GACCGGGACGCCCCGCCATGGCGTCTAAAACCTGGGAGCGTCGCTCCTGG
GTTTTGGCTACATCCACTACGGCAGGTGGACGCTGTGGAAGCCGGGGGGT
CGGCGAAGCACGGTCCGGCGGCACCCCGCATTTCCAGCAGAAATTAAACT
GGGCGAGATTCTCCTCGCGACATGCCAAGCAAAATGTGAACCTTGTTTCG
CTCCCCAAGCCTCGGGAGCCAGGCGTGGATCGCGAAATTCTTGAGATATA
ATATATTCCTCCTCGTACTAGGCGCTCGCCCGCCGCGGCGCCCGAGCCAC
CTGCTCCTCAGGCTACGAGCTCCACGGTTTCCGCGGTGATGTGTCGGCAC
AGCTGCCGCTGACTTTTTTACTGTCGCGGAGGCCAGACTATCGTTGGTCC
GGCCTGCTGTAGGGCCATTCGCCACCTCCATCCTCGGCGTGCACCGAGTA
GGGTCTGTCCACACCACTCCCAAGACTACCCTTTCTACTCTGGTGCAGCC
CGTTGTGTCGACGAGGGACCCGCTAGGTTGGGTGACTCCGGCCGGGGAGC
AGCCGAGGAGGGGAGGTGATTGCCGCTGATTCTATCTCCCTGTAATTCGG
GAGCAGGCTTTTTTAGGTGGGGGTTCGGTATCGTATTGGTAGTGCAGACA
CACTGTTGGAGAGCCACCGCTGTATGAGCTCTACCGACACCAGGCAAGCA
AGTGCGGAATAGTGTGCTCCTGAAGCAGGTGCTGGTCCTCGCCGGATTTG
AAGCCAGGGAAGATGCGGTAGAAATACTGCATCGTGATTATGTGGCCAAA
TTTTGAGGGGAAATCCTCTCGTTTCGGACAGGTTTATATCGGCGCGCACG
CTCTAACTCGGGAACACAGTGGCGGTCTGGTGGCGCTCCGCCGGAGCGTG
TTGACAGGTGGTCCACTCAACTATCACAATTTACAGCTGGCAAAAAGAAG
CAACACAGGAGGAATGCTCGATAGATGAGCTCTGTATTTTGGCTAAACGT
GCGGTCTAAACTTGAATAATCCGCACAATGCTGTACTGTTGTGATGCACA
GCACTACAGCAGTGTGCGGATTTTCTGTACAGCCGTACAGAACATGTGTG
GTTCTCTTTGCCAGCTGTAAATTGTGATAGTTGAATGGTAACACGCTCCG
GCGGAGCGCCACCAGACCGCCACTTCGTTCCCGAGTTAGGGCGTGCGCGC
CGATAATAAAAACCTGTCCGAAACGGTTGGATTTTCCCTCAAAAGTTGGC
CACACAATCATGATGCACTATTTTCTACCGCATCTTCCAGGGCTTTAAAT
CCGGCGAGAACCAGCACCTGCTTCAGGATCACACTATTCCGCACTTGCTT
GCCTAGTGTCGGTAGAGCTCATACCGCGGTGGCTCTCCAACAGTGTGTCT
GCGCCACACCGTAGGCAATGTACACGACAGCCGTCAATTGCTTCGACAAT
AATAGGCGTGGGGGGACATCTATCGATGTCCATCGTAGAATACAATCAAT
GGTTGAACGGATCTCTCGATATATGTTGCCGGGAACTATAGATGTGGAAA
ACCTTCATCGATAGTCCATTGCATAAGCAAAATATCGAGATAAACTGGCC
ATCGATATGCATTGCAGACCGTAGAAAATTGCAAAAGATTGAGGGACCAA
TCTATCGATAGCCACGCCGTCTACAATAGATAACGGGGTGATTCTATTTA
TAGCCATTGCCACGAACAGTATGTTATGGGGGATCTATCAATAGTCACTG
CCTTAACCCTTTGACCCCCGAGGGGTCTGAAAAAAAAACCATGGAGCCAA
AAATTAACTGATTCCGGTGCGCCGATGATTGGCGAATGGTGGACAGTCTC
GAAAAAAAAATAATGACGCCTGGCTCTGTCCAGTGATTAAAGGGTGTGAC
TTGGTTGTACACAGAAATCTGTCCCCAATTTGCCCTGAAAAAAATGGGGA
CATATCCCAGTCTAAAGCTAAACCAATTTTTTTTGGGGGGGTCAACTACA
CAAAAGTTGTTAATTTAGTTTTACAGGATGTTGCTTCAAACAAGGTGATA
CTGCTGTATGCAAGGTAGCACGCAAGCAGCAACACCGCCACTTAGCATGG
CAGACCAGGGTACCCCGCTCGACAACCACACAGCAGTAGGGTTCTACTCC
GCAAGATTATACCCGCACACGACATTCACTCAGGATCTACAGTATCATCA
GCAGCAGGAGCAGCAGCTGCACTACGATACAGCAGTCATCCCATTATGCA
CTCTGAAGTCAAACATATATATGTTGCATGATCAGCGCAAGGGTGTCGGC
ATGTGATGGTACCCATGTGACGATACTCGTACGAGATCGTCGGGTATGTT
TGTGAGCTTTCAAACGTGCGTGGCACGATGTCTCTGTTTGTAGTGTCGGC
CCGCGTGCGCATGGTGTGTGTCTCACCAACAAATCGCACGTCACATCAGC
TGCTGCAGTTTGCACAGCAGCAGCAGTATAGTAGTAGTAGTCGCGGAAAG
CAGGGCATATTCCAAGTGCAGTAGCAGCAGTACGTCATCAGCGTTTCGTA
GCAGCGGTAGTCTAACATATGTATCATGTATTATGTATTGTGTGCATGTA
TGTGTGCAAGGCAGGGAAGGGGTACCGGCATGGTGTGTGATACGAGACGA
TCGCCGTTGTGTCTACTATGCTGTAGAGGGAAGAGAATATCACATAACAA
ACCTAACGGTCGGGCATCAATTTTTTTCATTATTTTGGGCGTGCTTGGTC
TCCCATAATAATAATAATAATAATAATAATAAAGTAAATGTGGCACCAAG
GCAGCCAACGATTGGGCGATCCACACACATTCCGTCGAGCGCACGGAACC
ACACCCCAAATACCTGTAGATAGCCGCCTTCAAAACCCAAGTCACAAAAA
AAAACAGGTGTCCCCGAATTGTCCCCAATCGGGGTTGGGGGGTTCAAAGG
GTTAGACAATAGACTTTAAAGACGACCTCCTTTGTCCATCTACAGCAAGC
AGAAGTATTGACACCATGTATGCATAATATACTTAATTTTGAACATGCAA
TTAGGTATTGAAATCATCCGTGTGGCCGCTTTGCTGCCGCCCACCTTCCC
CTCAAAATTAACACACATCTATCCGCACTGCTTTTCTGCGCGGCCAGGGG
TCGTGACTCCCGTGGCACACCTACAGATAGTATTGTGGCCGGCAATGACT
GTTAAATAGACCCGCGTCAAAACACATTGTGCACGACAATGGCTATAGAT
GGACGCGGATGAAGTCCCATTCTGTCTACCAATGGTCATTGGCGTTTACG
ATGGTGTAGTCGATTGCAACAAACAGTATGTGTTGATCGAGAAATTGCCT
TCTCCATTGTGACAGCAAAGGCTTTTTGTATCCGTTGTGCCGATATCTAT
TGTTTCCTCCCATTTATATCTTTATATCGATAGACAGCGATGCCAATGCC
TTGTAGCCGACAAATGGCCATCGACGTTCAAATTCTCGGGGCCATTGCGG
CCGCAGTGTTCCATTACACCGTCTATTGTCCAGGGTATAAGGCACGTCGT
ATCCACACACACTACTCCCCATACAAACTACCCTGGATATATGTATCGAT
AGACGTGATGTGTGTGATGCACTTCGGGATGCCTGTATCGATGGACATTG
TCAATCACAACGGATTTCACAAGACTTCTGCTTGTCGATGGCCATTGCCG
TCGACAATTGATCATCCAAACTTTCCATCAATATCCATCACTGCAAACAA
TAGGTCAGATACTCCAGGTATCGATATATTCGGTCGCGAGGAATAGCATG
GAAAAGGGTTCTATCGATAGGTATGTCCGAAGACAATGGACGTCGACACC
TATCAATCAATAGCTATTCCCGAGGACAATGACGGCGTCCATTGTAGTGG
CAACAATGGCAGAAGCAATTGGACATTGTCTATTGTCTAGGGTGTGGTCT
CTGCGCTACCCATATGATTCCGGACCCTCACCTAAAAACGCCTGCTCCCG
AACTACAGGGAGATGGAATCAGCGGAAATTCCTCATTTACTTGAAATTTG
TTTGGAGTACCTTACCCAACCTTTTTCCATACCCTATAATGTCGTGTGAT
CTCCGGTAGATGCAGGTTCGTACATACATGCGCAGGCACGGGACGGGCTT
TGGTTGGTGTTCGCAGCCAGATGTTTCTTGAAGCGGTCGTGTATTATAGG
CAGAGGTGCCAAGCTGGTTCAGAATTGATCTAAGGGGGGAGCAAATGCAC
CACCATGGCAAGACAACAGTCTACGCCTGAGATCCCAACGGCACTCTTGC
TTCAAATTCCTACTTTATCTCAACCACTCTTATCCCAACTCCTATAACTA
CTGTACACTGTTGAAATTCACATAAATTTCCAACAGTGGGCTGCAACCCA
ACTTGCCACCATGCTGCTTTTGGTATACTGAACTTTACATCTGTTCTCAA
TGCTAATTCTCCATCAAGAACTCCACATCTAAGCCTTCTGAAACCAATAC
TGTAGCAGGAGACTTCCAATCTCATGCAGTAACTACTGAAATTCGGCCGA
AAAGTTGTCAAAAAATTGATTTACCCCCACGGGAGGGGAACAGATGGTTT
TGTGGTATTTGTTGTGAAAGACAGACTAAGCCGGTGTACAACCTGCAAGC
TGCGGAGAGAGAAAGCCGTCCATCAGAGAGAGGAAGATACACACACTGAT
ACACACACAGAAAAAAAGCAAGCGTTGATTCAGTGAGTTTTTTTTCTGGT
GGTGAAGCTGTTGTTGAGGGAAGAAGAGGTTGTTTCTTCGCTGACGCTGA
CGCTGACGCTGACGCTGACGCTGATGCTGCAGCATGCATGGCGTGGCGTG
GCCTTCACTTACGACGATGCAAAGCACACCCGCGTTCCCCGTATCTCGTG
TGTGGTCTGATCTACCGGTGTGTCGGTTCTGCGCGGCGAGCAGGCAAGAT
GCTTCTAGACGAGAAAGAAGCGGACGCCGAGGCCCACGAGGGAGAAAAGG
AGGCCCTGTGGAGGCGAATTCAGGTGAGCGAGAGCCGGAAAAGCCTGTTG
CCTGACGTTTTTATTTCTCACGTGTGGAGGCTCCCGTCGTAGCTCTTGCT
CGGCAAAATGTCACGTCAGATCCAGGGACGACGATGGTTGTAAGCATGCC
CGACCGTCGCTGCTGCTGTAATATTTTTATATTTATGACGAATATTTTAT
AAACCGGTTGTTTTTCGCTTTCTCTCTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTGGT
TGTTGTTGTTGTTGTTCTTATTGTTGTTGTTCTTATTGTTGTTGTTGTTA
TTCTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTCTT
ATTGTTGTTGCTGTTTTCACACCAGCATCCGTTCCGCTCTCTATCCTGCC
TCTCTAAATTCCGTCCTGGTGCGACCGGTTGGAGACGACGTGGTTGGCAA
AGGCTCATCGACGCACAAGAAAATATTATATTTTGTCGGAACAGCGTTGC
CAAATTTGAGCTGGACAGTAAAGGATTTATATGGCAAAGAATTCCGGCCG
AGCCTAAACTCGCCGAGCAGGTTGAACGCTTCACGTCGCCATCGATGGGT
CCCTCTCCAAAACAAGTAGAGAGCAAGTACCTGTAACGTTTTAACATCTC
GTTCTGTACCACTTTCTTTTTTCTTTTTCACTTTTCCAGCGTGACTTGCT
GGCGCCCCCAATCGCACGGATCACCCCCCCACCCCCCCGCCCCCCCTTCC
ACGAAACGCTCCGCGCAGGACATGGCGCGGAGAGTAATGGAGCTAGAGCA
AGAGGCCGCGGAGAGTCGTGACGAGCTTTCCCTGTACCTTGACCGAAGCG
GGCGCCAAGCGCTTCCTGCTGTTGCTTCTACTGCTGCTACAGAGGGCAGG
ATGAATAGGCGTATGTCAATCGGCGGCGGCGGCGGCAGCGGCGGCGATCG
CGCGGAGGAGAGGGCTCTCAGAGCAAAGAACGAGCTGTTGGAGCGACAGC
TGGTGCACATGAAGGAGGAGGCAGAGGAGAGACAGCTAGAACTCGCCGCT
GCGCAAAAGGTGCGCGTTTTGTCGTGTTGTGTTGTGTTGCGTTGTGTTGT
GGTGGCGTTTGCTTGATATATGATATCATGGTCGTGTTTCATTCATGTTG
GTGTTGATGACTTGGAGAGAAGGCGCTTGTTTGTTGTTGTCGAGGAGGTG
GCGGCGGCGGAGAAGCGCCTGCCATAGATGCAGACTATTAGTGTTTCTTT
CATCCTCGCGTCTTGCTTGTGTGGTTTCTTGTGGCTGCCGTGCTTGTTGC
TTCTTGGTTGCGTGCTTCGGCGACATTTATTTCAGTGGATATGCGCAAGA
AAAAAAGACGCCAACGCTAACGCATCCACCAAAGCCCATCCGCCGCACTT
CGCTTACAAGCAATAGCAGTATACGCTGCTGTTACCACCAACTTCCCTAA
AAAAGCAGCCCCTGCCCACCTTCGCGTTGGACTGCTGTTGCCACCTCTTG
TTGGTGATCCACTTGATTCGGTTTTATTCCCTCTCACCCCGGACGTAATC
AAGGCACGGTTTTCCAGGCGGTCGTCCCTGCAGCACAGCCACGGTGGGAG
AAGCTATGTCCTGAACTCTCCCGCCCCTTCTTCGCGGCTCGGTGGCGGGG
AGCGCGGCCTCAGCGGAGCCTTCAGCGTGGTCCTGGGTCCCCTCAGTCCC
ACGGGATCGTGCTCTCCAGGACCGGTACCGTCGGCCACGGTGGCGGCGGC
GGCGGATGGTGGCGGTGGCGGCTGCAGTACGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig63:215054..229185- >mRNA_P-littoralis_Contig63.43.1 ID=mRNA_P-littoralis_Contig63.43.1|Name=mRNA_P-littoralis_Contig63.43.1|organism=Pylaiella littoralis U1_48|type=CDS|length=819bp|location=Sequence derived from alignment at P-littoralis_Contig63:215054..229185- (Pylaiella littoralis U1_48)
TTGGGCTACAGCTGTGTGCTCTCTGGGATCCTGCTGCGACATCCATCAAG
AAGAAGCCCAGGAGTACCAGCAGCAGCCAAGAGAGGGCAGCAACGATCAC
GAAAAGAGATGATGGCGAACGCTCACGTCGGCGGCGAATCGTCTACCGGG
GGAGAGATGGACGAGCTTCTTATCCTGCTGGAGCAGAAGGACTCAGACCT
GAGGCGGGCGGCAGAGCTCGGCAAGATGCTTCTAGACGAGAAAGAAGCGG
ACGCCGAGGCCCACGAGGGAGAAAAGGAGGCCCTGTGGAGGCGAATTCAG
GACATGGCGCGGAGAGTAATGGAGCTAGAGCAAGAGGCCGCGGAGAGTCG
TGACGAGCTTTCCCTGTACCTTGACCGAAGCGGGCGCCAAGCGCTTCCTG
CTGTTGCTTCTACTGCTGCTACAGAGGGCAGGATGAATAGGCGTATGTCA
ATCGGCGGCGGCGGCGGCAGCGGCGGCGATCGCGCGGAGGAGAGGGCTCT
CAGAGCAAAGAACGAGCTGTTGGAGCGACAGCTGGTGCACATGAAGGAGG
AGGCAGAGGAGAGACAGCTAGAACTCGCCGCTGCGCAAAAGGCACGGTTT
TCCAGGCGGTCGTCCCTGCAGCACAGCCACGGTGGGAGAAGCTATGTCCT
GAACTCTCCCGCCCCTTCTTCGCGGCTCGGTGGCGGGGAGCGCGGCCTCA
GCGGAGCCTTCAGCGTGGTCCTGGGTCCCCTCAGTCCCACGGGATCGTGC
TCTCCAGGACCGGTACCGTCGGCCACGGTGGCGGCGGCGGCGGATGGTGG
CGGTGGCGGCTGCAGTACG back to top
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