prot_P-littoralis_Contig63.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig63.42.1
Unique Nameprot_P-littoralis_Contig63.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length131
Homology
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BLAST of mRNA_P-littoralis_Contig63.42.1 vs. uniprot
Match: A0A6H5J6R4_9PHAE (NAC-A/B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R4_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.440e-10
Identity = 50/105 (47.62%), Postives = 59/105 (56.19%), Query Frame = 0 
Query:   28 SEVSNDELRAADRAHAAAWTSSREGAEDAAESGGEHGE------------------AWLLEQNAXXXXXLEAKDELIEALREQLKDIQTQQRRGQGPRPVSSMQS 114
            SEVSNDELRAADR HA+A    R   E+  ES G+ G                   AWLLEQN      LEAKD+ I+ALREQ++ +Q  +R G GP P SSM S
Sbjct:  269 SEVSNDELRAADRVHASAL---RARIEEKGESDGDGGPGGREXXXXXXXXXXXQDVAWLLEQNTWLIQELEAKDDFIQALREQMEQLQ--RREGHGPGPSSSMHS 368
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BLAST of mRNA_P-littoralis_Contig63.42.1 vs. uniprot
Match: D7FI48_ECTSI (Nascent polypeptide associated complex alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI48_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 7.290e-9
Identity = 49/100 (49.00%), Postives = 57/100 (57.00%), Query Frame = 0 
Query:   28 SEVSNDELRAADRAHAAAWTSSREGAEDAAESGG-------------EHGEAWLLEQNAXXXXXLEAKDELIEALREQLKDIQTQQRRGQGPRPVSSMQS 114
            SEV NDELRAADR HA+A    R   E+A ES               E   AWLLEQN      LEAKD+ I+ALREQ++ +Q  +  G GP P SSMQS
Sbjct:  250 SEVWNDELRAADRVHASAL---RARIEEAGESDDXXXXXXXXXXIDDEQDVAWLLEQNTWLMQELEAKDDFIQALREQMEQLQ--RGGGHGPGPSSSMQS 344
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6R4_9PHAE2.440e-1047.62NAC-A/B domain-containing protein n=1 Tax=Ectocarp... [more]
D7FI48_ECTSI7.290e-949.00Nascent polypeptide associated complex alpha n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:213818..214943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.42.1mRNA_P-littoralis_Contig63.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig63 213818..214943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig63.42.1 ID=prot_P-littoralis_Contig63.42.1|Name=mRNA_P-littoralis_Contig63.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp
SEGAGGEGTSGAGDREEDDEDGDDDDDSEVSNDELRAADRAHAAAWTSSR
EGAEDAAESGGEHGEAWLLEQNAWLMEELEAKDELIEALREQLKDIQTQQ
RRGQGPRPVSSMQSPGGFDLPADSDDSDDSD
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