mRNA_P-littoralis_Contig629.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: D7FSG8_ECTSI (SF-assemblin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG8_ECTSI) HSP 1 Score: 387 bits (994), Expect = 2.250e-130 Identity = 228/271 (84.13%), Postives = 246/271 (90.77%), Query Frame = 3
Query: 144 MNVMENTXXXXXXXXXAEADPGSTKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
M VMEN + +P STKARL+GILESFQAFDSDMKTGTRVRRE DEHRIAQLTAELTRLEKTL+QEIKRRVEMNKSVQVWGE+EV++MSE+LQS ++ARS++I XXXXXXXXXXXXXXV+MAKIPVDIKQRGEELHKML DFE KFEAER+SRLEREGRILKQLADHEQEVATDFE+ERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELA L++ VSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSE+
Sbjct: 1 MQVMENGPSHTMASAGGD-EPNSTKARLNGILESFQAFDSDMKTGTRVRRENDEHRIAQLTAELTRLEKTLNQEIKRRVEMNKSVQVWGESEVEKMSEQLQSMVIARSDSIAGXXXXXXXXXXXXXXXXXVEMAKIPVDIKQRGEELHKMLTDFENKFEAERMSRLEREGRILKQLADHEQEVATDFETERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELADLKSAVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEI 270
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A7S1CKK5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKK5_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.070e-62 Identity = 122/258 (47.29%), Postives = 166/258 (64.34%), Query Frame = 3
Query: 195 EADP----GSTKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
EADP G TK +L+ ++ F F+ MK GTR RRE+DEHR+A+L +E+ RLEKT+S E++RR+EM+KS Q W E+ V + RL+S + R+ + + +D A++ +IK+R E L K L+DF+ FEAER RL REGRI +A HE E FE ER RE Y +L+ LD+ VR+R K DEKFQ FV EE+AA+RN + E + RE++D EIV+ LNRYT KLQ+SL+IINSS+
Sbjct: 24 EADPAAKSGRTKEKLNKMMGQFADFEGIMKEGTRQRREKDEHRLAELKSEMGRLEKTVSSEVRRRLEMSKSFQSWAESRVAEFQSRLESQLKQRTLQLQANIDAVNVRVDRLEEKFEQDKARMSAEIKERNERLTKQLLDFQEVFEAERQDRLRREGRIASDMAAHETETKESFEHERGLREKVYLELKTKLDDAVRTRTKADEKFQGFVSEEIAAIRNAIRKEEELREQEDDEIVETLNRYTQKLQASLQIINSSDT 281
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: W4GU67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU67_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.940e-54 Identity = 112/248 (45.16%), Postives = 155/248 (62.50%), Query Frame = 3
Query: 213 TKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
TK +L+ ++ +F +FD +M+ GTR RRE+DEHR+A++ A++TRLEK L+ E KRR EMNKS+Q ++ V MS + + + RL + IP I+ R EL L +F FEAER RLERE ILK+L+DHEQ VA F ER RE +L+ LD ++R++GD KFQ +EE+A ++N++ E QTRER+D EI+DALNRYT+KLQ SLK+INS+E
Sbjct: 32 TKTKLNKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRADMTRLEKALNAETKRRFEMNKSLQALCDDSVAAMSAKFDGVLADWMAKVDGRLQGLADKILTLEGQFEYEKVHIPEVIEARTNELTAKLSNFMDAFEAERTRRLEREAEILKRLSDHEQLVADQFSKERRDREVKATELKESLDMYTKTRLRGDGKFQLVAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINSTEA 279
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A7S3M234_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M234_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.810e-54 Identity = 110/249 (44.18%), Postives = 161/249 (64.66%), Query Frame = 3
Query: 210 STKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
+TK +L I+ F FD++MK GTR RRE+DE RI +L E++RL+ L+ EIKRR EMNKS Q+W E+++ ++ + T+ R E RL+ + AKI I RGEEL ++L F+ +F+ +R RL+RE I+KQL DHEQEV FE++ SRE Y+ +R IL++NVR R K + +FQ+F +EL L+N E + RE++D EI++ALNRYT KLQ+SLK++NS+++
Sbjct: 9 TTKEKLASIVHGFDEFDTEMKRGTRQRREKDEFRITELKTEMSRLDSDLTVEIKRRTEMNKSTQIWFEDQLSNLNVKFHETLEKRKEETYHRLERLNERISNMDMYFEDEKAKILKYIDDRGEELARLLYKFKEEFDEDRALRLDREAVIVKQLTDHEQEVNERFENQIESREARYSAVREILEDNVRLRDKTEARFQAFFDKELNRLKNDFRSEAEIREKEDDEIIEALNRYTLKLQTSLKVVNSTDM 257
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A6G0X288_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X288_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.510e-54 Identity = 114/259 (44.02%), Postives = 160/259 (61.78%), Query Frame = 3
Query: 195 EADPGS-----TKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
E PGS TK +LD ++ +F +FD +M+ GTR RRE+DEHR+A++ AE+TRLEK L+ EIKRR EMNKS+Q E+ V M+ + + + + +RL + IP I+ R EL L +F FE ER RL+RE ILK+L+DHEQ VA F ER RE +L+ LD ++R++GD KFQ ++E+ ++N++ E QTRER+D EI+DALNRYT+KLQ SLK+INS++
Sbjct: 18 EPTPGSLATTQTKTKLDKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRAEMTRLEKALNAEIKRRFEMNKSLQAMCEDTVATMTNKFDALLADWMTKVDARLAALADKIQALETQFEYEKVHIPEVIEARTTELTSKLSNFMQAFEEERKRRLDREAEILKRLSDHEQLVADQFSKERRDREVKSTELKESLDTYTKTRLRGDNKFQLVAQQEIVNIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINSTDA 276
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A7S0SS92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS92_9STRA) HSP 1 Score: 191 bits (485), Expect = 4.440e-54 Identity = 107/244 (43.85%), Postives = 158/244 (64.75%), Query Frame = 3
Query: 210 STKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKII 941
+T+ RL I+ F+ F+ DMK GTR RRE+DE RI++L E++RL+K L EIKRR EMNKS Q+W E +D +++ ST+ RS +R+D + +I I ++GE L K+L +F+ +FE ++I RLERE +I +QL DHEQ V +F+++ RE YA +R IL++N++ R K +EKFQ+F ++ L N + E Q RER+D EI++ALNRYT KLQ+SLK++
Sbjct: 18 TTRERLSTIVSGFEEFELDMKKGTRQRREKDEFRISELKNEMSRLDKDLIAEIKRRTEMNKSTQMWFEENLDSLNKTFHSTLNERSTKTNTRIDEINDRITTLDLRLTKEKEEIIKQIDEQGETLRKLLNEFKAEFEKDKILRLEREEKITEQLNDHEQLVDDNFKAQIEDREKRYALVRNILEDNIKLREKSEEKFQTFFENQIHILHNQIKNESQIREREDDEIIEALNRYTLKLQNSLKVV 261
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A024U8I8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8I8_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.120e-53 Identity = 110/248 (44.35%), Postives = 156/248 (62.90%), Query Frame = 3
Query: 213 TKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
TK +L+ ++ +F +FD +M+ GTR RRE+DEHR+A++ A+++RLEK L+ E KRR EMNKS+Q ++ V M+ + + + + RL + IP I+ R EL L +F FEAER RLERE ILK+L+DHEQ VA F ER RE +L+ LD ++R++GD KFQ +EE+A ++N++ E QTRER+D EI+DALNRYT+KLQ SLK+INS+E
Sbjct: 34 TKTKLNKMMSAFASFDDNMRIGTRQRRERDEHRLAEMRADMSRLEKALNAETKRRFEMNKSLQALCDDSVAAMTAKFDALLADWMAKVDGRLQALADKIQALEAQFEYEKVHIPQVIEARTNELTAKLSNFMDAFEAERTRRLEREAEILKRLSDHEQLVADQFSKERRDREVKATELKESLDMYTKTRLRGDGKFQHLAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINSTEA 281
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A7R9UAS1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS1_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.360e-53 Identity = 126/248 (50.81%), Postives = 168/248 (67.74%), Query Frame = 3
Query: 213 TKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
TK RL I++ F AFD++M+ GTR R+E+ R+A+L L +LEK L+ EI+RR+EMN+SVQ W E++V+ E+L+ + + A+ R+DXXXXXXXXXXXXXX + D ++R LH++ FE ER RL+REG+IL + + HE + A F++ERTSREN LR +ENVR R K DE FV+EELAAL+N VS E RER+D EIVDALNRYT KLQ SL+IINS ++
Sbjct: 60 TKERLASIIDGFDAFDTEMRVGTRQRQEKAAQRLAELRGILIQLEKKLNSEIRRRLEMNRSVQAWCESQVNTAVEKLEVLLQEKDAAVHQRIDXXXXXXXXXXXXXXXXXXXLTRDTEERVASLHELFDRLTTDFEVERKERLDREGKILHRQSAHEVDAAEKFKAERTSRENAVTALRTAFEENVRVRAKADEDLHRFVQEELAALKNAVSAEAVVREREDDEIVDALNRYTRKLQDSLQIINSPDI 307
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A2P4YHF8_9STRA (SF-assemblin n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YHF8_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.130e-50 Identity = 102/249 (40.96%), Postives = 157/249 (63.05%), Query Frame = 3
Query: 210 STKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEV 956
+T+++L+ ++ F FD M+ GTR RRE+DE+R+A++ E++RLE L EIK+R+EMNKS+Q + + +V M+E +S + R++ + RLD + IP+ I+ + EL + LI F F+ ER R +E ILK+L+DHE A FE ER RE Y++L+ LD +R++GDE+F +F ++E+A ++N + E Q RER+D EIV+ALNRYT+KLQ SLK+I S +
Sbjct: 3 ATRSKLEKLMNGFTTFDDVMRIGTRQRREKDEYRLAEMRQEMSRLEHKLEAEIKKRIEMNKSLQNYCDEQVAHMTESFESLLNERAKQVDDRLDHLTREINDLQALVAKEKHDIPLMIENKTNELTQKLIAFMDSFDEERQRRANQEAMILKRLSDHEHATAEVFERERHDRELKYSELKNALDTYTATRIRGDERFHAFAQQEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKVITSPDA 251
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Match: A0A225V5R6_9STRA (SF-assemblin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V5R6_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.210e-50 Identity = 103/244 (42.21%), Postives = 156/244 (63.93%), Query Frame = 3
Query: 210 STKARLDGILESFQAFDSDMKTGTRVRREQDEHRIAQLTAELTRLEKTLSQEIKRRVEMNKSVQVWGENEVDQMSERLQSTILARSEAIGSRLDXXXXXXXXXXXXXXVQMAKIPVDIKQRGEELHKMLIDFEGKFEAERISRLEREGRILKQLADHEQEVATDFESERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELAALRNMVSLERQTRERDDGEIVDALNRYTSKLQSSLKII 941
+T+++L+ I+ F FD M+ GTR RRE+DE+R+A++ E++RLE L EIK+R+EMNKS+Q + + +V M+ +S + AR++ + RLD + +IP+ I+ + EL + LI F F+ ER R ++E ILK+L+DHE A FE ER RE Y++L+ LD +R++GDEKF +F +EE+A ++N + E Q RER+D EIV+ALNRYT+KLQ SLK +
Sbjct: 28 ATRSKLEKIMSGFTTFDDVMRIGTRQRREKDEYRLAEMRQEMSRLEHKLEAEIKKRIEMNKSLQNYCDEQVATMTTSFESLLSARAKQVDDRLDHLTQEISDLQTLVAKEKREIPLLIENKTNELTQKLIAFMDSFDEERKRRTDQEAMILKRLSDHEHATAEAFERERHDRELKYSELKNALDTYTTTRIRGDEKFHAFAQEEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKTL 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig629.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig629.13.1 >prot_P-littoralis_Contig629.13.1 ID=prot_P-littoralis_Contig629.13.1|Name=mRNA_P-littoralis_Contig629.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=272bp MNVMENTVAGGGAAAAAEADPGSTKARLDGILESFQAFDSDMKTGTRVRRback to top mRNA from alignment at P-littoralis_Contig629:82878..94424+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig629.13.1 ID=mRNA_P-littoralis_Contig629.13.1|Name=mRNA_P-littoralis_Contig629.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11547bp|location=Sequence derived from alignment at P-littoralis_Contig629:82878..94424+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig629:82878..94424+ >mRNA_P-littoralis_Contig629.13.1 ID=mRNA_P-littoralis_Contig629.13.1|Name=mRNA_P-littoralis_Contig629.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=816bp|location=Sequence derived from alignment at P-littoralis_Contig629:82878..94424+ (Pylaiella littoralis U1_48)back to top |