prot_P-littoralis_Contig629.2.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig629.2.4
Unique Nameprot_P-littoralis_Contig629.2.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length913
Homology
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 909 bits (2349), Expect = 0.000e+0
Identity = 514/697 (73.74%), Postives = 547/697 (78.48%), Query Frame = 0
Query:  226 EGLRPMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTD---WLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISD----GKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNP-PALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDH----PSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAPVTATES 910
            +G RPMEEVAEEWGLD RL E LR EGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVH+VFK+YARGTGLRVGLAIGQTNFLEEQL+LVG VALAGNP ATARASFLRAQGR + P+PT GG N D   W G GAPAGGSSEVDIVVATPGRLLDHL QTPGFTLQHLRYL+IDEADRLLNQSYQGWVGKVI+AAYR++PG AAP+YE     G           GG+R  VS  +G  D    G+Q                 +V+   +   +  GK P P   R PSA SL+PVTVRGRPLATG+R+ GATVSTPPLRKLLFSATLTNNPQKLAGL VVNPLIYTA E   A                          RPSQETRRS+L+ I     G GRFSTP+TL+ETYTVCDSQAKPLVLLSLLREMVGRQ +LSVVFTSSVDSTHRLFRLLQLFGGFE  + T A  EG GGD     P D IH D    G    DGGVAEFSSSLGQRQRS +IRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQ KTYVHRVGRTARAGSRG AVTI KKGQVKQFL MR+ +D+KRVRLD SPADQSRLL LAGRYQ CLKDLKEV++AER GELDPSAPVTATES
Sbjct:  169 QGPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNG-----------GGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTA-----------AGGQRRETSGADGDPRPSQETRRSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLSLLREMVGRQADLSVVFTSSVDSTHRLFRLLQLFGGFERTAGTDA--EGGGGDGDTHLPDDAIHGD----GNDDGDGGVAEFSSSLGQRQRSSIIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQAKTYVHRVGRTARAGSRGTAVTITKKGQVKQFLNMRSGIDKKRVRLDSSPADQSRLLPLAGRYQLCLKDLKEVMEAERTGELDPSAPVTATES 837          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 4.380e-162
Identity = 364/730 (49.86%), Postives = 420/730 (57.53%), Query Frame = 0
Query:  229 RPMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVP----------DIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGR--FSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRS------------------------------------HMIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAPVTATES 910
            RP+EEVAEEWGLD RL  TLR +GV HFFPIQV VVP          DI+AT RHSHVQ+RD+CV APTGSGKTLV+VLGV+QAL+ RRV RLRAL LLPSRDLA QVH VF  Y  GTGLRVGLAIGQ+N L+EQLSLVG  AL+ +PVA ARA      G    P     G     +    P GG SEVDI+VATPGRLLDHL QTPGFTLQHL YLV+DEADRLLNQSYQ WVG+V+EAAYR + G                        G    P+S  S  +      XXXXXXXXXXXXX                              ++P TVRGRP A   RV+G   +T PLRKLLFSATLTNNPQKLA LG+ NP+ YTARE             XXXXXXXXXXXXX +   P Q T R  L E  +GG GE    +STP++L E   +C +  KPL+LL+LL         L+VVF SSVDSTHRL RLLQLFG        AA                              AEFSS+L Q+QR+                                             A+ V+VCSDGMARGMD+ GVG VVNYD P+  +TYVHRVGRTARAG  G+AVT+ K+GQV QF  MRA V+   V   P  A+      LA RY+RCL++L  VL+AE+ GEL  +APV A +S
Sbjct:   32 RPVEEVAEEWGLDPRLRRTLRTQGVTHFFPIQVSVVPNITAMVSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWVGGKSGGLRAPPA---GAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVTC--------------------GSSSSPISNPSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE----------GRGXXXXXXXXXXXXXGSVAAPEQRTDRFTL-EARDGGDGEAADAYSTPASLTERTLLCAAAEKPLLLLALLLRGPVHGV-LTVVFASSVDSTHRLARLLQLFG-------VAA------------------------------AEFSSALSQKQRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSVVVCSDGMARGMDIAGVGCVVNYDAPTHARTYVHRVGRTARAGRAGLAVTLLKRGQVGQFAAMRAKVNAVEV---PGMAEAPPTDGLAARYRRCLRELAAVLEAEKRGELGAAAPVGALDS 682          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA)

HSP 1 Score: 364 bits (935), Expect = 9.390e-110
Identity = 270/709 (38.08%), Postives = 351/709 (49.51%), Query Frame = 0
Query:  231 MEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAG-NPVATARASFL----------RAQGRHMGPDPTNGGLNTDWLGGG---------APAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTP-----PLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREM------VGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRAR-----AGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSA 903
            + E A  W L   L   L E+   +FFPIQ  V+PD++A+ERH+H+++RDICV+APTGSGKTL FVL VL +L  RR+ RLRALV+LPSRDLA QV  VF+RY++G+ L +GLAIGQT+F  EQ SL+    + G  P    R  +           +A       D ++  L   W  G           P GG S VD++V TPGRL+DHL +TPGFTLQHLR+L+ DEADRL+NQ YQ W+ +V+EAA                                                                   A P +S+   S      L +L      +PVT R R +   D     T  T       LRKLLFSATLT +P+KLA LG+VNP  + A      +  +                    A  P+  T                 +S P  L E    C+++ KPLVL++ L E        G+   + VVFTSSVDSTHRL RLLQLF         A+G  G     P+                  V EFSS+L Q+QRS +++R          VRV+VCSDGM+RGMD+  +  V+NYDVPS  KTYVHR GRTARAG  G A+TI K GQV +FLKMR  +D K   ++ +   +  +  +   Y+ C+K LK V+DAE   EL P A
Sbjct:  174 IREAANLWKLAPFLINNLEEDEYDNFFPIQALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA------------------------------------------------------------------SAGPDRSLNMDSC----GLQKL------DPVTWR-RGIDANDSNHANTQDTNVCRSVQLRKLLFSATLTKDPRKLASLGLVNPKYFDAHSLNNKVSASQD------------------ANTPNHST-----------------YSLPGGLSEFMVECNAEQKPLVLMAFLLEQGLLDKGEGQTNGIVVVFTSSVDSTHRLARLLQLF--------WASGKYG-----PTSC----------------VGEFSSALPQKQRSQLMKRCNNTTDDPSRVRVVVCSDGMSRGMDISSITAVINYDVPSFAKTYVHRCGRTARAGRSGRAITIMKSGQVARFLKMRQLID-KPQNVEKAGIKKELVNSIVPIYKICVKALKRVMDAEEDNELSPVA 740          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: M4B1B7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1B7_HYAAE)

HSP 1 Score: 337 bits (865), Expect = 1.250e-101
Identity = 240/671 (35.77%), Postives = 325/671 (48.44%), Query Frame = 0
Query:  234 VAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGE-----GRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGEL 899
            ++ +W L   +  TL    ++ FFP+Q   +P I+A+   ++ +  DIC+SAPTGSGKTL +V+ ++Q L+ R V R+RAL+++PSRDLA+QVHA+ + + + T L  GLA+GQ+NF+ EQ +LVG   ++G  V  A                                GG S VDIVVATPGRL+DHL QT GFTLQHL+  V+DEADRLL+QSYQ W+ KV  + +      A    + +   GE                   A G++  +QD                       SI+ R  +                                      PL ++L SATLT NP+KLA +G+ N  + T                               A    Q T     NE  + G  E      R+STP  LDE +  CD+ +KPL+LL LL E  G    LS++FT+SV STHRL RLLQL+                   HP                   + EFSSSL Q+QRS ++   +AG V  +VCSD MARGMD++ +  V+NYDVPS  KTY+HRVGRTARAG  G  VT+ K GQ+K  ++M    D  +++  P P  Q  +  L  RY   L+ LKE LDAE+AGEL
Sbjct:   20 LSAQWDLAPAVCSTLSTLAIRSFFPVQAVAIPKILAS---TNDRVTDICISAPTGSGKTLTYVVPIVQRLLSRVVCRVRALIVVPSRDLAVQVHAIVQAFCQNTPLTCGLAVGQSNFVVEQRALVGDCHVSGQDVKDAMH------------------------------GGQSAVDIVVATPGRLVDHLEQTRGFTLQHLQLFVVDEADRLLSQSYQDWIAKVYSSVF------AGQEVDDDVLAGE-------------------ACGVTWRRQD-----------------------SIDRRRIRT-------------------------------------PLTRVLLSATLTRNPRKLAAIGMSNAELTTIGRI-----------------------DDPLADNAKQSTVGDSDNEDEKEGSKEVASSAKRYSTPKNLDEYWIECDTGSKPLILLELLSEFAG---SLSIIFTASVSSTHRLARLLQLYS-----------------THPER-----------------IREFSSSLSQKQRSTLVADCKAGRVDTVVCSDAMARGMDIEDIANVINYDVPSFVKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLKKADTNKLK--PYPLQQDHVKSLVPRYTEALQRLKETLDAEKAGEL 510          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A1E7FSJ3_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSJ3_9STRA)

HSP 1 Score: 325 bits (834), Expect = 4.460e-97
Identity = 251/698 (35.96%), Postives = 329/698 (47.13%), Query Frame = 0
Query:  230 PMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGT--GLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGE---GRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELS-------------VVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAG---AVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAK-KGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAP 904
            P+ E A  WG+   L   L+  G +HFFPIQ   +PD +  ERH + ++ RD+C +APTGSGKTL FVL VL AL  RRV RLRALV+LPSRDLA QV+ VF  Y +G+   LR+GLAIGQT F  EQ  L+                        +G D  +G  N   +    PAGG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QSY GW+ +V++  +                                                                  A P +S++S+        S   S+ S   +  R +                 LRKLL+SATLT +PQKL+ L ++NP  + A +                             KR S  T  +D  +I    G       +  P  L E    C ++ KP+VLL+LL E +    E S             VVFTSS+++THRL RLLQL          AAG+ G                           EFSS+L Q QRS +++R       +V V++CSDGM+RGMDL  V  V++YDVP   KTYVHR GRTARAG  G A+ I K KGQ  QF K+R  +     R+  +    S +  +   Y++C+  LKEVL AE   EL  ++P
Sbjct:    5 PIAEAARRWGMAEFLVRNLQSNGHEHFFPIQALTIPDAIIAERHMTSLRIRDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLI------------------------LGDDADSGADNKRKI----PAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH------------------------------------------------------------------APPTQSMDSKDNSTDKIYSDGTSSESPSDICQRVQ-----------------LRKLLYSATLTKDPQKLSSLRLINPKYFNAHDL----------------------------KRRSS-TGVNDSRDIGNMNGNNLENSLYRMPEQLKECTVECTAEQKPIVLLALLLERLKEYEESSISSPNXXXXXXXXVVFTSSLEATHRLTRLLQLL--------FAAGNYGTP-----------------------PVEFSSNLNQNQRSMLMKRCNDENDRSVSVLICSDGMSRGMDLASVVAVIHYDVPGMAKTYVHRCGRTARAGQDGTAIAILKGKGQAGQFAKLRRLIALPE-RVTKTSVKTSLVRCVIPLYRQCVSCLKEVLAAEDRNELKSTSP 530          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN)

HSP 1 Score: 323 bits (828), Expect = 9.750e-96
Identity = 249/680 (36.62%), Postives = 340/680 (50.00%), Query Frame = 0
Query:  234 VAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNP-LIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNE----IVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAPVTAT 908
            +A +W L   +  TL    ++ FFP+Q   +P ++     ++ +  DIC++APTGSGKTLV++L ++Q L+ R V RLRAL++LPSRDLA+QVH +  ++   T LR GLAIGQ+NF  EQ +LVG                  + GR     P   G++       A  GG S+VDI+VATPGRL+DHL QTPGFTLQHL++LV+DEADRLLNQSYQ W+ K+  + +                            NG   Q V E                          A+A        RS                             D ++   + T PL ++L SATLT NP+KLA +G+ N  L    R        A         XXXXXXXXX         T  +D +E    +      E  ++TP+ LDE    CD+ +KPLVLL +L E   + + L+++FT+SV STHRL RLLQL+                  D P                   + EFSS+L Q+QRS ++   +  A+ V+VCSD MARGMD++ V  V+NYDVP+  KT  HRVGRTARAG  G  VT+ K GQ+K  L+M    D K+  L P   DQ  +  L  RY + L+ LK+ LDAE+ G+L P+A + ++
Sbjct:   29 LAAQWKLSPEVVGTLSRMKIRSFFPVQAVAIPKLLD---QTNDRITDICINAPTGSGKTLVYILPIVQRLLPRVVYRLRALIVLPSRDLAIQVHQIVSQFCESTPLRCGLAIGQSNFAAEQQTLVG------------------SDGRQ----PHQHGISRTTSKSMAVDGGDSKVDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKIYASIF----------------------------NG---QEVEELEA-----------------------AMASTADHXTRRS-----------------------------DAINRRRIRT-PLTRVLLSATLTRNPRKLASIGMSNAELTKIGRIDDPLADNARIGDDAESDXXXXXXXXXXXXXXDDTVTAHADEHESTAIVTATAKEEKMYATPANLDEYVXECDTGSKPLVLLEILSEY--KASGLTIIFTASVXSTHRLARLLQLYA-----------------DEPER-----------------IREFSSTLTQKQRSALVADCKRRAIDVVVCSDAMARGMDIENVAXVINYDVPTYIKTXXHRVGRTARAGRHGRXVTLVKXGQMKGMLRMLKKADSKK--LLPYELDQPHMKTLVPRYTQALQLLKDTLDAEKNGKLAPNAALRSS 561          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: K0SZ73_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ73_THAOC)

HSP 1 Score: 327 bits (837), Expect = 3.520e-95
Identity = 262/730 (35.89%), Postives = 361/730 (49.45%), Query Frame = 0
Query:  230 PMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQ-SRDICVSAPTGSGKTLVFVLGVLQALI-------RRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIG----QTNFLEEQLSLV---------------GAVAL--AGNPVATARASFLRAQGRHMGPDPTN---------GGLNTDWLGGGAPA-GGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTP-PLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLR---------EMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAGA-----VRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAPV 905
            P+E+ A  W L   L + LRE+  + F PIQ  V+PD++ +ER+SH++ +RD+C  +PTGSGKTL FVL +L AL         R + RLRALV+LPSRDLA QVH VF RY++G+ +++GLA+G    +T+   E+ SLV               G V    +G P+  A A       RH   DPT+         G  + D      P   G S VDI+V TPGRL+DHL  TPGFTLQHLR++VIDEADRL+NQ YQ W+ +V++A+       +   +E           +D S     RQP+  A                                  + ++    P   R+  + +    ++ G    T   + G T+  P PLRKLLFSATLT +PQKLA LG+ NP  Y A                                   ++ +     E  + G    ++  P  L E+   C ++ KPLVLL+LL          E   +  +L++VFTSSVDSTHRL RLLQL          AAG  G     PS                  VAE+SSS+  +QR+ ++RR R+       V V+VCSDGMARGMDL  VG+V+NYDVPS  KTY+HR GRTAR    G A+ + K GQV +F KMR+ +D     +      +  +      Y+ C+K L++V+ AE   ++ PS+ V
Sbjct:  171 PLEQAARHWNLPRFLVDNLREDSYERFLPIQCMVIPDVIESERNSHLRGARDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFMRYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEEANARV-----RHS-FDPTSISEALSAFDGRGSKDSCFEATPKICGISAVDILVCTPGRLVDHLDSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQAS------NSENCFEP--------LNLDMSFREYIRQPLRTAP---------------------------------DGQTFNIDPVTHRIAGSGAAH--SLLGDSNTTESGLIGGTIGRPVPLRKLLFSATLTQDPQKLARLGLDNPKHYDANYL--------------------------------KKHQSGSATEEAKAG----KYFLPVGLRESMVECTAEQKPLVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQLL--------WAAGGYGL----PSH-----------------VAEYSSSIDTKQRAAILRRCRSSLGENEKVSVLVCSDGMARGMDLPSVGVVINYDVPSFAKTYIHRCGRTARCXXTGRAINVLKGGQVNKFRKMRSLIDGGADAVHEGSVKKDLVKGALPLYKACVKALQKVITAENDEDMGPSSSV 780          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.260e-94
Identity = 254/716 (35.47%), Postives = 336/716 (46.93%), Query Frame = 0
Query:  230 PMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHS-HVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGT--GLRVGLAIGQTNFLEEQLSLVGAVALA---GNPVATARASF--------LRAQGRHMGPDPTNGGLNTDWLGGGA----PAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETG---IDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELS----------------VVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAG---AVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAK-KGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAP 904
            P+ E A  WG+   L   L   G +HFFPIQ  V+PD++  ERH   ++ RD+C +APTGSGKTL FVL VL AL  RRV RLRALV+LPSRDLA QV+ VF  Y++G+   LR+GLAIGQT+F  EQ  L+   +     GN     + S         L A    +  D   G    DW    A    PAGG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QSY GW+ +V++  +      A P   +  A  +T+ G   ID         PV+     +                      V   G   +++S  +    S +   + L                          RKLL+SATLT +PQKL+ L ++NP  + A +                                    RR +   + +       +  P  L E    C ++ KP+VLL+L+ E +    EL                 VVF SS++STHRL RLLQL           A D G                           EFSS+L Q QRS ++RR       +V V+VCSDGM+RGMDL     V++YDVP   KTYVHR GRTARAG  G A+ + K KGQ  QF ++R  +     R+  +    S +      Y+ C+  L++VL AE   EL P+ P
Sbjct:  184 PIVEAARRWGMADFLVRNLVSNGHEHFFPIQALVIPDVIVAERHMMSLRVRDVCCAAPTGSGKTLAFVLPVLNALAARRVRRLRALVILPSRDLAQQVYEVFDAYSKGSKNDLRIGLAIGQTDFKAEQKKLIFGDSDENEDGNNWTRLQNSLDPGNLELALDAMREQLENDNDIGDETKDWKSNNAKSKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH------APPAPTSRTAEYKTDEGTISID---------PVTHRRSENSS-------------------FVTGIGPEKDNQSSSDVGVHSNICQRIQL--------------------------RKLLYSATLTKDPQKLSALRLINPKYFNAHDL----------------------------------KRRQNAMLVHKDSSASNLYRMPEQLKECTVECTAEQKPIVLLALILERLKEYRELEELAASSSSGKPKKNTIVVFASSLESTHRLTRLLQLL--------WQAADYGTS-----------------------PVEFSSALNQHQRSKLMRRCNDPTDRSVSVLVCSDGMSRGMDLASCRAVIHYDVPGMAKTYVHRCGRTARAGQDGTAIALLKGKGQAGQFARLRRLIALPE-RVTKASVKTSLVRDAIPLYKHCVSXLRDVLAAEDRNELKPTDP 773          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A3M6V6V5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6V5_9STRA)

HSP 1 Score: 315 bits (808), Expect = 1.980e-93
Identity = 229/673 (34.03%), Postives = 319/673 (47.40%), Query Frame = 0
Query:  234 VAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNFLEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGR---FSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSA 903
            +AE+W L   +  TL    ++ FFP+Q   +P I+A++     +  DIC+S+PTGSGKTL +V+ ++  L+ R V R+RAL++LPSRDLA+QVH + +++ + T L+ GLAIGQ NF  EQ +LVG V+ A   + T                                 GG S VDIVVATPGRL+DHL       LQHL+ +++DEADRLLNQSYQ W+ KV  + +                                                              G+ + + G+ +E                     VT R +     D ++   + T PL ++L SATLT NP+KLA +G+ N  +                                 A  P Q       +E+ EG         +STP+ LDE +  CD+ +KPLVLL LL E  G    LS+VFT+SV+STHRL RLLQL+                         H +            + EFSS L Q+QRS ++   +AG V  +VCSD MARGMD++ V  VVNYDVPS  KTY+HRVGRTARAG  G  VT+ K GQ K  ++M    D  +++  P    Q  +  L  RY + L+ LK+ L+AE+AG+L  ++
Sbjct:   20 LAEQWNLAPEVCSTLDMLKIRSFFPVQAVAIPKILASDSD---RVTDICISSPTGSGKTLTYVVPIIHRLLPRVVCRIRALIVLPSRDLAVQVHQIVQQFCKDTPLKCGLAIGQNNFTMEQNALVGDVSGAMVSIKT--------------------------------HGGHSLVDIVVATPGRLVDHLEXXXXXXLQHLQIMIVDEADRLLNQSYQDWITKVYASVFN-------------------------------------------------------------GQEMDDEGQDVEVG-------------------VTCRRQ-----DSINRRRIRT-PLTRVLLSATLTRNPRKLAAIGMSNAEL-----------------------TRIGRMDDPLADNPKQGIASDSNDEVEEGDEASSSTKMYSTPTNLDEYWIECDTGSKPLVLLELLSEFDG---SLSIVFTASVNSTHRLARLLQLY-----------------------STHSER-----------IREFSSGLSQKQRSALVADCKAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQTKGMIRMLKKSDNNKLK--PYQLQQDHMKTLVPRYTKALQQLKDTLEAEKAGKLQATS 509          
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Match: A0A7S4EEM3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEM3_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.160e-92
Identity = 256/720 (35.56%), Postives = 336/720 (46.67%), Query Frame = 0
Query:  230 PMEEVAEEWGLDSRLAETLREEGVKHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGT--GLRVGLAIGQTNFLEEQLSLV----------------------GAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGGAPAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSEASGISDGKQDQXXXXXXXXXXXXXGRAVAEPGKSIESRSGKNPPALSRLPSAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGLGVVNPLIYTARETVAAIVVATXXXXXXXXXXXXXXXXXTAAKRPSQETRRSDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQTELS----------------VVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHEDPATGGXXXXDGGVAEFSSSLGQRQRSHMIRRARAG---AVRVIVCSDGMARGMDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAK-KGQVKQFLKMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELDPSAP 904
            P+ E A  WG+   L   L   G KHFFPIQ  V+PD++  ERH + ++ RDIC +APTGSGKTL FVL VL AL  R+V RLRALV+LPSRDLA QV+ VF  Y RG+   L++GLAIGQT+F  EQ  L+                      G + LA + +     S     G+    D  N    T  +    PAGG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QS+ GW+ +V++  +      A P                         P S+  G  D  QD+                  +P   I  R  ++ P +  + SA         G P     R+         LRKLL+SATLT +PQKL+ L +VNP  + A +                                  +   +  N+ +EG      +  P  L E    C ++ KP+VLL+L+ E +    EL                 VVF SS++STHRL RLLQL           A D G                           EFSS+L Q QRS +++         V V+VCSDGM+RGMDL     V++YDVP   KTYVHR GRTARAG  G A+ + K KGQ  QF ++R  +     R+       S +      Y+ C+  L++VL AE   EL P+ P
Sbjct:  122 PIVEAARRWGMADFLVRNLISNGHKHFFPIQALVIPDVIVAERHMTSLRVRDICCAAPTGSGKTLAFVLPVLNALAARKVRRLRALVILPSRDLAQQVYEVFDAYKRGSKNDLQIGLAIGQTDFQAEQKRLIFGDDKENVNGKSWTQLRNSLDPGNINLALDAMKEQLRSDKGINGKTKNLDSNN---RTPRI----PAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSFHGWIQRVLDCVH------ALPT------------------------PSSQIIG-EDRNQDEGEDVI-----------TIDP---ITHRRSEHDPFVDNISSAAI-------GPPSNINQRIQ--------LRKLLYSATLTKDPQKLSSLRLVNPKYFNAHDL--------------------KRRQNKMLLNKECDIGANSRNQKLEGS----LYRMPEQLKECTVECTAEQKPIVLLALILERLKEYRELEESAASSLSEKPEKNTIVVFASSLESTHRLTRLLQLL--------WQAADYGTT-----------------------PVEFSSALNQHQRSKLMKCCNDPNDRTVSVLVCSDGMSRGMDLASCRAVIHYDVPGMAKTYVHRCGRTARAGQEGTAIALLKGKGQAGQFARLRRLIALPE-RVTRVSVKISLVRDAVSLYKHCVSRLRDVLAAEDRNELKPTDP 718          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig629.2.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI0.000e+073.74DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA4.380e-16249.86DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3V688_9STRA9.390e-11038.08Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
M4B1B7_HYAAE1.250e-10135.77Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A1E7FSJ3_9STRA4.460e-9735.96DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A2D4BV54_PYTIN9.750e-9636.62DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]
K0SZ73_THAOC3.520e-9535.89Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448ZLR2_9STRA1.260e-9435.47Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A3M6V6V5_9STRA1.980e-9334.03Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A7S4EEM3_9STRA4.160e-9235.56Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 714..832
e-value: 4.2E-17
score: 72.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 765..832
e-value: 1.7E-16
score: 60.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 687..874
score: 14.437676
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 252..620
e-value: 3.1E-33
score: 126.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 272..608
score: 20.462038
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 407..463
e-value: 2.4E-13
score: 50.2
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 258..357
e-value: 2.1E-17
score: 63.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 195..609
e-value: 5.0E-55
score: 188.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 667..874
e-value: 1.4E-32
score: 114.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 276..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..555
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..528
NoneNo IPR availablePANTHERPTHR24031:SF68ATP-DEPENDENT RNA HELICASE DDX51coord: 208..854
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 208..854
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 672..840
e-value: 7.77644E-36
score: 129.935
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 438..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig629contigP-littoralis_Contig629:14182..39245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig629.2.4mRNA_P-littoralis_Contig629.2.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig629 14070..40546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig629.2.4 ID=prot_P-littoralis_Contig629.2.4|Name=mRNA_P-littoralis_Contig629.2.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=913bp
MFKVQRFTADDDDDETGDGGDNNNNGPTDILNKVLERAKARASKAKRARL
GNDEDIQRQDGPGGIFLGRHSGTVGDAAASGAAVDSRGTGVAGSRGGIAS
RGCGQGLPTTTAAVAASTSSKACTVARGAAVRQEKEGSNEESSREEEQED
GGSGEWGSSSSEEDGGESGEDSEESGSGRGSESDGEGKDAEMRTAEEATA
AAAAGVTKQASSTAAAAAAAAGDDSEGLRPMEEVAEEWGLDSRLAETLRE
EGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVL
QALIRRRVVRLRALVLLPSRDLAMQVHAVFKRYARGTGLRVGLAIGQTNF
LEEQLSLVGAVALAGNPVATARASFLRAQGRHMGPDPTNGGLNTDWLGGG
APAGGSSEVDIVVATPGRLLDHLAQTPGFTLQHLRYLVIDEADRLLNQSY
QGWVGKVIEAAYRRKPGKAAPLYETNAARGETETGIDGSANGGERQPVSE
ASGISDGKQDQNKNQNHNQNQNQNGRAVAEPGKSIESRSGKNPPALSRLP
SAVSLEPVTVRGRPLATGDRVSGATVSTPPLRKLLFSATLTNNPQKLAGL
GVVNPLIYTARETVAAIVVATAGSGGDGDGGGGGGGGGTAAKRPSQETRR
SDLNEIVEGGGGEGRFSTPSTLDETYTVCDSQAKPLVLLSLLREMVGRQT
ELSVVFTSSVDSTHRLFRLLQLFGGFEGASATAAGDEGRGGDHPSDMIHE
DPATGGGGGGDGGVAEFSSSLGQRQRSHMIRRARAGAVRVIVCSDGMARG
MDLDGVGLVVNYDVPSQPKTYVHRVGRTARAGSRGVAVTIAKKGQVKQFL
KMRASVDRKRVRLDPSPADQSRLLQLAGRYQRCLKDLKEVLDAERAGELD
PSAPVTATESYQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS