prot_P-littoralis_Contig628.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig628.8.1
Unique Nameprot_P-littoralis_Contig628.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 9.500e-87
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0
Query:   85 VSHAAAEEISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 226
            VSHAAAEEISN EDVP LKDPVAIADFEALDIRVGRIVLA+LIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVL+AANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL
Sbjct:    5 VSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 6.610e-59
Identity = 98/142 (69.01%), Postives = 116/142 (81.69%), Query Frame = 0
Query:   85 VSHAAAEEISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 226
            VS A  EE ++  DVPAL+  V++A +EALDIRVGRIV A+ +PDPDHGNKPSRKYLSLVV LGNE R ++S VR + DVE+AIGK+VL+ AN EEE ILG PSRG+LL  +N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:   18 VSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 157 bits (396), Expect = 1.630e-44
Identity = 79/134 (58.96%), Postives = 106/134 (79.10%), Query Frame = 0
Query:   91 EEISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVS 224
            E+  +  D+P +KD V+ A  ++LDIRVGRI  ADLIPDP+H  KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NVE++T+LG+ S G+LLS SN ++ P+PRTLRTVL  GGG+PPGS VS
Sbjct:   71 EDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 103 bits (256), Expect = 1.980e-23
Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 0
Query:   88 AAAEEISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSG 225
            A   E +++   PA+K  V  + FE++D+RVG I  A  + D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G+ S G +L+G N+   PMPR+ + +L G G +PPGS V G
Sbjct:   77 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 100 bits (248), Expect = 2.770e-22
Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 0
Query:   88 AAAEEISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGS 221
            A   E +++   PA+K  V  + FE++D+RVG I  A  + D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G+ S G +L+G N+   PMPR+ + +L G G +PPGS
Sbjct:   49 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A0A7W1RGU4_9BACT (Methionine--tRNA ligase subunit beta n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1RGU4_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 3.420e-11
Identity = 44/113 (38.94%), Postives = 68/113 (60.18%), Query Frame = 0
Query:   96 KEDVPA-------LKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKE 201
            K D+PA       LK+ V I D + LD+RVG ++ A+ +P        S+K L L +DLG E R VVS +      E+ IGK V++ AN++  T++G+ S+G +L+GS +SK+
Sbjct:  175 KSDLPAVPASYTPLKETVNIGDVQRLDLRVGTVMTAEPVPK-------SKKLLKLQIDLGFELRTVVSGISQNYKPEEIIGKKVVVVANLQPATLMGIQSQGMILAGS-WSKD 279          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: F8L0R3_PARAV (Methionine--tRNA ligase n=5 Tax=Parachlamydia acanthamoebae TaxID=83552 RepID=F8L0R3_PARAV)

HSP 1 Score: 72.4 bits (176), Expect = 4.380e-11
Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   97 EDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSG 195
            ++  ALKD + I DF+ LD+RVG+I+ A  +P        S+K L L+VDLG EKR +VS +      E  IGK +++ AN++   ++G+ S+G +L+G
Sbjct:  568 QEYTALKDVIGIEDFQKLDLRVGQILEAVPVPK-------SKKLLKLLVDLGFEKRTIVSGIHLAYKPEQLIGKKIVVVANLKPAXLMGIESQGMVLAG 659          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 72.0 bits (175), Expect = 5.880e-11
Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 0
Query:  100 PALK-DPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSKEPMPRTL 207
            PA K + ++I DF  +DIR+G+I+ A+ IP        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+   TI G+ SRG +L+  + +   +P T+
Sbjct:  554 PAPKMEEISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: UPI001BC9DE0B (methionine--tRNA ligase n=1 Tax=Parachlamydia sp. AcF125 TaxID=2795736 RepID=UPI001BC9DE0B)

HSP 1 Score: 72.0 bits (175), Expect = 5.920e-11
Identity = 36/99 (36.36%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   97 EDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSG 195
            ++  +LK+ + I DF+ LD+RVG+I+ A  +P        S+K L L +DLG EKR +VS +      E+ +GK +++ AN++  T++G+ S+G +L+G
Sbjct:  568 QEFSSLKESIGIEDFQKLDLRVGQIIEAVPVPK-------SKKLLKLSIDLGFEKRTIVSGIHLAYKPEELVGKKIVVVANLKPATLMGIESQGMVLAG 659          
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Match: A0A2V3WI52_9BACI (Methionine--tRNA ligase n=1 Tax=Streptohalobacillus salinus TaxID=621096 RepID=A0A2V3WI52_9BACI)

HSP 1 Score: 71.2 bits (173), Expect = 1.070e-10
Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   92 EISNKEDVPALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSN 197
            E    +D+PA K+ V   DF  LD+RV  ++ A+ +   D       K L + VDLGNEKR+++S + +  + E+ +GK V++ AN++   + G  S+G +L+G +
Sbjct:  529 EPEQNQDIPAFKEEVTFDDFLTLDMRVAEVIQAEKLKKAD-------KLLKIYVDLGNEKRQIISGIAAYYEPEELVGKKVIVVANLKPVKLRGELSQGMILTGED 627          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig628.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI9.500e-8797.18tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA6.610e-5969.01tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP1.630e-4458.96Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.980e-2342.66tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA2.770e-2242.45Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A7W1RGU4_9BACT3.420e-1138.94Methionine--tRNA ligase subunit beta n=1 Tax=Parac... [more]
F8L0R3_PARAV4.380e-1139.39Methionine--tRNA ligase n=5 Tax=Parachlamydia acan... [more]
UPI001AE5ECDA5.880e-1138.53methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
UPI001BC9DE0B5.920e-1136.36methionine--tRNA ligase n=1 Tax=Parachlamydia sp. ... [more]
A0A2V3WI52_9BACI1.070e-1033.96Methionine--tRNA ligase n=1 Tax=Streptohalobacillu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 103..223
e-value: 8.1E-20
score: 72.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 106..222
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 117..199
e-value: 4.1E-6
score: 26.8
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 110..224
score: 17.721586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..76
NoneNo IPR availablePANTHERPTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERcoord: 101..223
NoneNo IPR availablePANTHERPTHR11586:SF35METHIONYL-TRNA SYNTHETASE N-TERM HOMOLOG (METS-LIKE)coord: 101..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig628contigP-littoralis_Contig628:30948..37774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig628.8.1mRNA_P-littoralis_Contig628.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig628 30130..37856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig628.8.1 ID=prot_P-littoralis_Contig628.8.1|Name=mRNA_P-littoralis_Contig628.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MKMSTISSALLSWTAALLSLLLATRTCDAFMSSPPCSSAARTASSAISAG
FRDSLAGSGRPPQQQRRADGRGRGGATTMMMMMAVSHAAAEEISNKEDVP
ALKDPVAIADFEALDIRVGRIVLADLIPDPDHGNKPSRKYLSLVVDLGNE
KRRVVSAVRSIVDVEDAIGKAVLIAANVEEETILGLPSRGKLLSGSNFSK
EPMPRTLRTVLLGGGGVPPGSAVSGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR002547tRNA-bd_dom