mRNA_P-littoralis_Contig627.25.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig627.25.4
Unique NamemRNA_P-littoralis_Contig627.25.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.680e-192
Identity = 291/455 (63.96%), Postives = 331/455 (72.75%), Query Frame = 1
Query:    1 CADGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            C DG PVGN+GAAKVL V ++R+I WV  E  +K L+   PKLS+AKS+HAG A  T +V+Q LEDYINEQR+EHRGCG+ EVMNKLLELKPDALGGL A A+ +E   FR KFKNWY RFR+R G SIRRRTSVGQKLPTG+EG+A                              PIKG+DL+  QLESVA  VFEELGNMDQTPVQ EMPVETTLEK GAKDARIST GKEKERFTLCLAVMA+G +VPLRIIFKG PFIPP+ + +GK+TQPRKGSIAAE+                    E+SW DA ECTLW+SESW  RPN+GS+IKQR SILVLDDF+               NT VILIPGGLTPLLQPLDRML+K+MKRL+R  YT + A A+ DPKTGKL+P GRG VSTWCKE+WA IT + VK CFK+CGLTLALDGSED A
Sbjct:   91 CEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDA 531          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.460e-191
Identity = 298/466 (63.95%), Postives = 331/466 (71.03%), Query Frame = 1
Query:    7 DGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI---------------------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            DG PVGN GAA VL V  KR+IEW++ EE+L+  + A PKLS+AK +H+G  +ST+D +QAL DY+NEQRK+HR CGN EVMNKLLELKPDALGG+   A P+EA  F+ KF +WY+RFRKR GFSIRRRTSVGQKLP G+EGMA                              PIKGEDLTSEQL SV A VFEELGNMDQTPVQHEMPVETTLEK GAKDARIST G+EKERFTL LAVMA+G +V  RIIFKGTPFIPPT SGK KST PRK S+A EI                                 EKSW D REC  WI  SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ A T VI IPGGLT LLQPLDRMLNKQMKRLLRG YTA +A AV D ++GKL P   G VSTWCKEAW  IT   V+TCFKICGLTLALDGSE HA
Sbjct:  102 DGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHA 566          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 568 bits (1465), Expect = 8.410e-191
Identity = 288/447 (64.43%), Postives = 330/447 (73.83%), Query Frame = 1
Query:    1 CADGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLA 1191
            C DG P GN+GAAKVL V ++R++EWV+ EE L+  + A PKLS+AK +HA   +S  D+++AL ++IN+QRK H GCG+   MNKLLELKPDALGGL A   P+EA    +KFK+WY+RF KR  FSIRRRTSVGQKLP GHEGMA                              PI+GEDL+S QLE V   +FEELGNMDQTPVQHEMPVETTLE  GAKDARI+T GKEKERFTLCLAV A+G +VPLRIIFKGTPF+PP   GKGK+TQPRK SIA E+                    EKSWCD REC LWI +SWKLRPNNGSI++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGL PL QPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL P GRG V+TWCK AWA ITP++VKTCFKICGLTLA
Sbjct:   72 CEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 549 bits (1415), Expect = 1.030e-190
Identity = 283/462 (61.26%), Postives = 330/462 (71.43%), Query Frame = 1
Query:   58 KKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTA--------------------------GKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            ++R++EWV+ EE L+  + A PKLS+AK +HAG  +ST D+++AL ++IN+QRK H GCG+  VMNKLLELKPD LGGL A   P+EA  F++KFK+WY+RFRKR  FSIRRRTSVG +LP GHEGMA                              PI+GEDL+S QLE V   +F++LGNMDQTPVQ+EMPVETTLEK GAKDARI+T                           GKEKERFTLCLAV A+G++VPLRIIFKGTPF+PP   GKGK+TQPRK SIA E+                    EKSWCD RE  LWI +SWKLRPNNGS+++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL P GRG V+TWCK AWA ITP+ VKTCFKICGLTLALDGSEDHA
Sbjct:   24 ERRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 485          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 547 bits (1410), Expect = 2.180e-189
Identity = 293/458 (63.97%), Postives = 328/458 (71.62%), Query Frame = 1
Query:   19 VGNTGAAKV-LGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKL--------RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            VG  G+  + L V +KR+IEW++ E +L+  + A PKLS+AK +H+G  +ST+D +QAL DYINEQRK HRGCGN EVMNKLLELKPDALGG+PA A P+EA  F+ KF +WY+RFRKR GFSIRRR SVGQKLP G+EGMA                              PIKGEDLTSEQ  SV A VFEELGNMDQTPVQHEMPVETTLE  G KDARIST GKEKERFTL LAVMA+G  V   IIFKGTPFIPPT SGKGKST PRK S+A E+                    EKSW   +EC  WI  SWKL        RPNNGSI++QRP ILVLDDFKCH+DE FIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++A AV D ++GKLKP  RG VSTWCKEAW  +T + V TCFKICGLTLALDGSEDHA
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA 534          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 540 bits (1392), Expect = 1.040e-185
Identity = 288/455 (63.30%), Postives = 329/455 (72.31%), Query Frame = 1
Query:    7 DGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRG-CGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAG-KEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            DG PVGN GAAKVL V +KR+IEW++ E +L+  + A PKLS+AK +H+G   ST+D +Q     ++++  +     GN EVMNKLLELKPDALGG+PA A P+EA +F+ KF +WY+RFRKR GFSIRRRTSVGQKLP G+EGMA                              PIKGEDL SEQL SV A VFEE+GNMDQ PVQHEMPVETTL+K GAKDARIST G  EKERFTL LAV A+G +V  RIIF+GTPFIPPT SGKGKST+PRK  +A E+                    EKSW D REC  WIS SWKLRPNNGSI++QRP ILVLDDFKCH DE FIA L++ ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++  AV D ++GKLKP  RG VSTWCKEAW  ITP+ VKTC KICGLTLALDGSEDHA
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5JE48_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE48_9PHAE)

HSP 1 Score: 494 bits (1271), Expect = 3.760e-171
Identity = 258/389 (66.32%), Postives = 304/389 (78.15%), Query Frame = 1
Query:   76 WVQGEEKLKGLI--DATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFK-NWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAPIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            WV  E  +K L+  D   KLS+AKS+HAG A +  +V+Q LEDYINEQR++HRGCG+ EVMNKL ELKPDALGGL A A+ +E   FR KFK NWY RFR+RR       TS+  +      G +PIKG+DL+  QLESVAA  FEELGNMDQTPVQ EM VETTLEKRGAKDARIST GKEK+RFTLCLAVMA+G +VPLRIIFKG PFIPP+ +G+GK+TQPRKGSIAAE+      ++     RECTLW+SE W+  PN+GS+IKQR SILVLDDF+ HR E+FI DL+++ NT VILIPGGLTPLLQPLDRMLNK++KRL+RG  T + A A+ DPKTGKL+P GRG VST CKE+WA ITP+ VK CFK+CGLTLALDGSED A
Sbjct:   25 WVGEEATMKKLVKRDKPKKLSQAKSIHAGMAPTIAEVEQDLEDYINEQRRDHRGCGSMEVMNKLPELKPDALGGLTAAASAEETLAFRTKFKKNWYHRFRERR-------TSIYARRNPPASGESPIKGKDLSPAQLESVAAEGFEELGNMDQTPVQQEMLVETTLEKRGAKDARISTGGKEKDRFTLCLAVMADGGKVPLRIIFKGKPFIPPSTAGRGKNTQPRKGSIAAEVLPANRTKRKAGVTRECTLWLSERWRFWPNHGSVIKQRHSILVLDDFRYHRSESFIEDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEIKRLMRGRCTQYMASAIADPKTGKLQPPGRGLVSTRCKESWAAITPETVKKCFKVCGLTLALDGSEDDA 406          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 499 bits (1286), Expect = 4.600e-171
Identity = 264/437 (60.41%), Postives = 302/437 (69.11%), Query Frame = 1
Query:   55 SKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            +K+R++EWV+ EE L+  + A PKLS+AK +HAG  +ST D+++AL ++IN+QRK H GCG+  VMNKLLELKPDA GGL A   P+EA                   F+IRR TSVGQKLP GHEGMA                              PI+GEDL+S QLE V   +FEELGNMDQTPVQHE PVE  L KR     R   A   +ERFTLCLAV A+G +VPLRIIFKGTPF+PP   GKGK+TQPRK SIA E+                    EKSWCD REC LWI +SWKLRPNNGSI++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA  DPKTGKL P GRG V+TWCK AWA ITP+  KTCFKICGLTLALDGSEDHA
Sbjct:   77 TKRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDAAGGLTAKPKPEEAL-----------------AFNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKR---PVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHA 492          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 3.920e-165
Identity = 256/372 (68.82%), Postives = 275/372 (73.92%), Query Frame = 1
Query:  250 MNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            MNKLLELKPDALGG+PA A P+EA  F+ KF +WY+RFRKR GFSIRRRTSVGQKLP G EGMA                              PIKGEDLTSEQL SV A VFEELGNMDQTPVQHE+PVETTLEK GAKDARIST GKEKERFTL LAVMA+G +V  RIIFKGTPF PPT SGKGKST PRK S+A EI                    EKSW D REC  WIS SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR  YTA++A AV D ++GKLKP  RG VSTWCKEAW   TP+ VKTCF ICGLTLALDGSEDHA
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHA 372          
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 1.140e-162
Identity = 257/455 (56.48%), Postives = 298/455 (65.49%), Query Frame = 1
Query:    1 CADGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLHAGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPATATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMA------------------------------PIKGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTAGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGSIAAEI--------------------EKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDGSEDHA 1215
            C DG PVGN+GAAKVL V ++R++EWV+ EE L+  + A PKLS+AK +HAG  +ST D+++AL ++IN+QRK H GC                          +EA  F++KFK+WY+RFRKR  F+IRRRTSVGQKLP GHEGMA                              PI+GEDL+S QLE V   +FEELGNMDQTPVQHE            +DA     GKEKERFTLCLAV A+G +VPLRIIFKGTPF+PP   GKGK+TQPRK SIA E+                    EKSWCD REC LWI  SWKLRPNNGSI++QR  ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQ LDRMLNKQMKRLL              PKTGKL P GRG V+TWCK AWA ITP+ VKTCFKICGLTLALDGSEDHA
Sbjct:   85 CEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGC--------------------------EEALAFKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHE------------RDA----GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 497          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig627.25.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQM5_9PHAE1.680e-19263.96DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE1.460e-19163.95DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE8.410e-19164.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE45_9PHAE1.030e-19061.26DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE2.180e-18963.97DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.040e-18563.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE48_9PHAE3.760e-17166.32DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE4.600e-17160.41DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE3.920e-16568.82DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE1.140e-16256.48DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig627contigP-littoralis_Contig627:99976..101560 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1215
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.5e-105
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1215
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791308.1310263-CDS-P-littoralis_Contig627:99975..1004251680791308.1310263-CDS-P-littoralis_Contig627:99975..100425Pylaiella littoralis U1_48CDSP-littoralis_Contig627 99976..100425 -
1680791308.1490335-CDS-P-littoralis_Contig627:100485..1006461680791308.1490335-CDS-P-littoralis_Contig627:100485..100646Pylaiella littoralis U1_48CDSP-littoralis_Contig627 100486..100646 -
1680791308.160011-CDS-P-littoralis_Contig627:100866..1010301680791308.160011-CDS-P-littoralis_Contig627:100866..101030Pylaiella littoralis U1_48CDSP-littoralis_Contig627 100867..101030 -
1680791308.1735528-CDS-P-littoralis_Contig627:101120..1015601680791308.1735528-CDS-P-littoralis_Contig627:101120..101560Pylaiella littoralis U1_48CDSP-littoralis_Contig627 101121..101560 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig627.25.4prot_P-littoralis_Contig627.25.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig627 99976..101560 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig627.25.4

>prot_P-littoralis_Contig627.25.4 ID=prot_P-littoralis_Contig627.25.4|Name=mRNA_P-littoralis_Contig627.25.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=405bp
CADGNPVGNTGAAKVLGVSKKRVIEWVQGEEKLKGLIDATPKLSRAKSLH
AGAASSTIDVDQALEDYINEQRKEHRGCGNAEVMNKLLELKPDALGGLPA
TATPQEAEEFRAKFKNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAPIK
GEDLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARIST
AGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKGS
IAAEIEKSWCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRD
EAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA
KAVTDPKTGKLKPLGRGQVSTWCKEAWAQITPDLVKTCFKICGLTLALDG
SEDHA
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mRNA from alignment at P-littoralis_Contig627:99976..101560-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig627.25.4 ID=mRNA_P-littoralis_Contig627.25.4|Name=mRNA_P-littoralis_Contig627.25.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=1585bp|location=Sequence derived from alignment at P-littoralis_Contig627:99976..101560- (Pylaiella littoralis U1_48)
TGCGCGGACGGCAACCCGGTCGGAAATACCGGAGCGGCGAAAGTTCTTGG CGTATCCAAAAAGCGTGTGATCGAGTGGGTGCAGGGGGAGGAAAAACTCA AGGGTTTGATCGACGCCACGCCCAAACTATCGCGTGCCAAGTCACTTCAC GCTGGAGCTGCATCTTCGACCATCGATGTGGACCAGGCCCTGGAGGACTA CATCAATGAACAGCGAAAGGAGCACCGCGGCTGCGGAAACGCGGAGGTCA TGAACAAGCTGCTGGAACTCAAGCCTGATGCCCTCGGGGGTCTTCCCGCC ACCGCTACGCCGCAAGAGGCAGAGGAGTTCCGGGCCAAGTTCAAGAACTG GTATCGGCGTTTCCGCAAGCGCCGCGGGTTTAGTATTCGCCGGCGTACCA GCGTGGGTCAGAAGCTGCCCACAGGACACGAGGGCATGGCGTGGACAACG TTGATGAAGCTGCGGGCTGCTCTCCTGAAGCGCGCTGGTGAGATTTACGA GGAGCGCCACCCGTCCCCACCTGGCGAGAGCCCCATCAAAGGGGAGGACC TGACTTCCGAGCAGCTGGAGTCGGTGGCCGCGACGGTTTTCGAGGAACTC GGCAACATGGACCAGACGCCTGTCCAGCACGAGATGCCGGTCGAAACGAC TCTGGAAAAGCGTGGCGCCAAGGATGCTCGCATCAGCACCGCAGGTACGA GTCTTATCTATAGGTACTTCAACTTTTGTTTTGTGCTGTTGCTTGTCGGG ATTTGGTCTCTCTCTAGGTCGACAAGAATTATGATTTTGGTCTACGCTGC TTTACTGTTTGTTCGCTGTTTTGGGTCGGCAGTTGGTCTCTGTCATAATA TAAAACAACAGATTAACTGAAAAACTTTTCTCCCCTCGTCTACTTTGTAC TGGTTCCCCCGCAGGCAAGGAGAAGGAACGCTTCACGCTCTGTCTTGCTG TCATGGCGAACGGCAGCAGGGTTCCACTACGGATTATCTTCAAGGGCACG CCGTTCATCCCTCCGACCAAGTCAGGGAAGGGCAAGAGCACTCAGCCGCG GAAGGGGTCGATCGCGGCAGAGATTGTCCCCGGGAACCGTACCAAGCACG GGCACCCCGCCGGCGGCATGTCGTTTGGAGTGCAGGAGAAGAGCTGGTGC GACGCGCGGGAGTGCACCCTGTGGATCTCGGAGAGCTGGAAGCTGCGCCC CAACAACGGAAGCATAATCAAGCAGCGCCCAAGCATCTTGGTGTTGGACG ACTTCAAGTGCCACCGGGACGAGGCTTTCATCGCCGACCTCCAGAAGAAA GCTAACACCATCGTCATCCTCATCCCGGGCGGTTTGACGCCGCTGCTACA GCCGCTGGACCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGGA TGTACACCGCCCACACCGCCAAGGCAGTCACCGACCCCAAGACGGGAAAG CTGAAGCCGCTGGGACGTGGGCAGGTGTCGACGTGGTGCAAGGAGGCGTG GGCGCAGATCACTCCTGACCTGGTCAAGACTTGCTTCAAGATCTGCGGGC TCACGCTTGCTCTTGATGGCAGCGAGGACCATGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig627:99976..101560-

>mRNA_P-littoralis_Contig627.25.4 ID=mRNA_P-littoralis_Contig627.25.4|Name=mRNA_P-littoralis_Contig627.25.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1215bp|location=Sequence derived from alignment at P-littoralis_Contig627:99976..101560- (Pylaiella littoralis U1_48)
TGCGCGGACGGCAACCCGGTCGGAAATACCGGAGCGGCGAAAGTTCTTGG
CGTATCCAAAAAGCGTGTGATCGAGTGGGTGCAGGGGGAGGAAAAACTCA
AGGGTTTGATCGACGCCACGCCCAAACTATCGCGTGCCAAGTCACTTCAC
GCTGGAGCTGCATCTTCGACCATCGATGTGGACCAGGCCCTGGAGGACTA
CATCAATGAACAGCGAAAGGAGCACCGCGGCTGCGGAAACGCGGAGGTCA
TGAACAAGCTGCTGGAACTCAAGCCTGATGCCCTCGGGGGTCTTCCCGCC
ACCGCTACGCCGCAAGAGGCAGAGGAGTTCCGGGCCAAGTTCAAGAACTG
GTATCGGCGTTTCCGCAAGCGCCGCGGGTTTAGTATTCGCCGGCGTACCA
GCGTGGGTCAGAAGCTGCCCACAGGACACGAGGGCATGGCCCCCATCAAA
GGGGAGGACCTGACTTCCGAGCAGCTGGAGTCGGTGGCCGCGACGGTTTT
CGAGGAACTCGGCAACATGGACCAGACGCCTGTCCAGCACGAGATGCCGG
TCGAAACGACTCTGGAAAAGCGTGGCGCCAAGGATGCTCGCATCAGCACC
GCAGGCAAGGAGAAGGAACGCTTCACGCTCTGTCTTGCTGTCATGGCGAA
CGGCAGCAGGGTTCCACTACGGATTATCTTCAAGGGCACGCCGTTCATCC
CTCCGACCAAGTCAGGGAAGGGCAAGAGCACTCAGCCGCGGAAGGGGTCG
ATCGCGGCAGAGATTGAGAAGAGCTGGTGCGACGCGCGGGAGTGCACCCT
GTGGATCTCGGAGAGCTGGAAGCTGCGCCCCAACAACGGAAGCATAATCA
AGCAGCGCCCAAGCATCTTGGTGTTGGACGACTTCAAGTGCCACCGGGAC
GAGGCTTTCATCGCCGACCTCCAGAAGAAAGCTAACACCATCGTCATCCT
CATCCCGGGCGGTTTGACGCCGCTGCTACAGCCGCTGGACCGCATGCTCA
ACAAGCAGATGAAGCGGCTGCTGCGGGGGATGTACACCGCCCACACCGCC
AAGGCAGTCACCGACCCCAAGACGGGAAAGCTGAAGCCGCTGGGACGTGG
GCAGGTGTCGACGTGGTGCAAGGAGGCGTGGGCGCAGATCACTCCTGACC
TGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGCTTGCTCTTGATGGC
AGCGAGGACCATGCG
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