mRNA_P-littoralis_Contig626.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI) HSP 1 Score: 209 bits (532), Expect = 4.410e-57 Identity = 136/375 (36.27%), Postives = 184/375 (49.07%), Query Frame = 2
Query: 233 LVETTPKKSHSEDPWIFFTVTINNWDWCGTGPLFLTFLV--GCSFSGYKNLAKHDKKAGGLEVGRLGDFPTPASK---------------------------GRASFSGEQKGRDKSTKELKAEGGENIKKRKEDMETYTDDCSHGGGFFSRVVVVVVLWGTATHRSPSLVFL*YVVCPGANCM*SHASE*HDHMSFSSCRILSSMSEKRATLRTGGNQVGSAPSNGAAASTRKAIPGAPDPAKAHGYCFGFGADGEGLAEKLKRVFPDEDG--DGSSTPEGCTIRTQVRRGGSDEGQKLWKLDQEGHLILPAHDTNATKGHPRCQIGGTVPVEKVNGSWHLITWAIPLVAKGEVMSSITHNECLNGAGKKLRDK 1264
LV+T + +PW++ I NW++C +GP F+ + GC FSGYKNL KHDK G+EVGR GDF TPA+K G +++ +++G +KST E K EG + C+ + G + + C G H H+ +S A L TG NQVGSAPS+GAAA RK IPG +P +AHG+CFGFGADG GL +KL F ++G DG T GC I G +G+ W+LD+ +LILP H + T+GHPRCQ+GG VPVEKVN SW L WA+ + ++ I+ ++ NGA K R K
Sbjct: 231 LVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGC-FSGYKNLGKHDKTTRGMEVGRSGDFSTPATKAIATLREETVKHAAHQRTIDSGRTPLRGNVNYTAKERGAEKSTNERKGEG--------------ANSCN--------------ITGCSCESAEECT------CVG-----------HQHVKNASVA--------GAALGTGANQVGSAPSDGAAAKMRKPIPGQLNPVRAHGFCFGFGADGVGLPQKLHDKFAGKNGFGDGPITEGGCEI-PNFSEAGVTKGKSTWQLDEHDNLILPVHSSIETEGHPRCQLGGCVPVEKVNESWRLCHWALKYILARRIVQRISQSQRHNGAPAKSRAK 550
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: D7FLR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR6_ECTSI) HSP 1 Score: 206 bits (524), Expect = 6.010e-55 Identity = 133/358 (37.15%), Postives = 187/358 (52.23%), Query Frame = 2
Query: 233 LVETTPKKSHSEDPWIFFTVTINNWDWCGTGPLFLTFLV-GCSFSGYKNLAKHDKK-AGGLEVGRLGDFPTPASKGRASFSGEQKGRDKSTKELKAEGGENIKKRKEDMETYTDDCSHGGGFFSRVVVVVVLWGTATHRSPSLVFL*YVVCPGANCM*SHASE*HDHMSFSSCRIL----SSMSEKRATLRTGGNQVGSAPSNGAAASTRKAIPGAPDPAKAHGYCFGFGADGEGLAEKLKRVFPDEDGDGSS--TPEGCTIRTQVRRGGSDEGQKLWKLDQEGHLILPAHDTNATKG-HPRCQIGGTVPVEKVNGSWHLITWAIPLVAKGEVMSSITHNECLNGAGKKLRDKKKMRK 1279
LV T + +PW++ I+NW++C +GP F+ F+ F+GYKNL +HD+K A +EVGR GDF TP++KG+ + G T + + G V + T + A++ H ++ +++ S ATL TG NQVGSAP+N AAA+ R+AIPGAP PA+A+G+CFG GADG+GLA KLK++F E+G G T +GC G ++ + W LD +LILP H++N+ G HPRCQIGG V VE+V GSW L WA V+ G V+ ITHN+ NGA +K DKK+ +K
Sbjct: 345 LVRTKEGTTRGGNPWVWLVTVIDNWEYCWSGPGFVVFMTHNWCFAGYKNLKEHDRKGANQMEVGRSGDFSTPSAKGKVNGPKSNFG-------------------------MTANATVEGARAREVAAEAAVEAAYTAEEQA------------------AAQGHLVVAIKRRKLVVKARQDQSTGGATLGTGANQVGSAPTNSAAATARRAIPGAPSPARAYGFCFGLGADGKGLAGKLKQLFAGENGFGRGPITTDGCNAPKFGEAGVTNSDRFSWTLDDHDNLILPVHNSNSYGGKHPRCQIGGVVLVERVKGSWRLCPWAYRYVSTGRVVQQITHNQRHNGAQQKGSDKKRAQK 659
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE) HSP 1 Score: 183 bits (465), Expect = 3.030e-47 Identity = 123/349 (35.24%), Postives = 153/349 (43.84%), Query Frame = 2
Query: 233 LVETTPKKSHSEDPWIFFTVTINNWDWCGTGPLFLTFLV--GCSFSGYKNLAKHDKK-AGGLEVGRLGDFPTPASKGRASFSGEQKGRDKSTKELKAEGGENIKKRKEDMETYTDDCSHGGGFFSRVVVVVVLWGTATHRSPSLVFL*YVVCPGANCM*SHASE*HDHMSFSSCRILSSMSEKRATLRTGGNQVGSAPSNGAAASTRKAIPGAPDPAKAHGYCFGFGADGEGLAEKLKRVFPDEDG--DGSSTPEGCTIRTQVRRGGSDEGQKLWKLDQEGHLILPAHDTNATKGHPRCQIGGTVPVEKVNGSWHLITWAIPLVAKGEVMSSITHNECLNGAGKKLRDK 1264
LV T + +PW++ I+NW+ C +GP FL F+ GC FSGYKNL +HDK+ A +EVGR GDF TPA+KG+ G NQVGSAPSNGAAA RK IPG +P K +G+CFGFGADG GL +KL F E+G DG T GC I G +G+ W+LD+ +LILP H N T+GHP C IGG VPVEKVN SW L WA+ + ++S +T N NGAG+K R K
Sbjct: 358 LVRTREGTTRGGEPWVYLVTVIDNWEHCWSGPGFLLFVTQQGC-FSGYKNLKEHDKEGARQMEVGRSGDFSTPAAKGKIG-------------------------------------------------------------------------------------------------------------GANQVGSAPSNGAAAKVRKPIPGQRNPVKEYGFCFGFGADGVGLDQKLHDKFAGENGFGDGPITEGGCEI-PNFSEAGVTKGESTWQLDEHDYLILPVHSGNKTEGHPACTIGGCVPVEKVNESWRLCHWALKYILNRRIVSKVTQNARHNGAGEKSRAK 595
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE) HSP 1 Score: 165 bits (418), Expect = 5.780e-41 Identity = 94/183 (51.37%), Postives = 116/183 (63.39%), Query Frame = 2
Query: 731 SFSSCRILSSMSEKRATLRTGGNQVGSAPSNGAAASTRKAIPGAPDPAKAHGYCFGFGADGEGLAEKLKRVFPDEDGDGSS--TPEGCTIRTQVRRGGSDEGQKLWKLDQEGHLILPAHDTNATKG-HPRCQIGGTVPVEKVNGSWHLITWAIPLVAKGEVMSSITHNECLNGAGKKLRDKKK 1270
S C + K A++ G + VG APSNGAAA RK IP P+PAKA G+CFG GADG GLAEKLK++F E+G G T +GC G + + W+LD++G LILP H+TN G HP CQIGGTVPVEKVNGSW L +WA+P V+ G V+ ITHN N A +K R KK+
Sbjct: 370 SAEECTCVGHQHVKNASV-AGESVVGGAPSNGAAARLRKHIPDPPNPAKARGFCFGIGADGVGLAEKLKQLFAGENGFGKGPITTKGCHTPKFGEAGVTKSDRFSWQLDEDGCLILPPHNTNNPGGKHPTCQIGGTVPVEKVNGSWRLCSWALPYVSTGRVVQKITHNARHNNAPQKSRGKKR 551
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: A0A6H5LDF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDF4_9PHAE) HSP 1 Score: 158 bits (399), Expect = 8.330e-40 Identity = 82/98 (83.67%), Postives = 86/98 (87.76%), Query Frame = 2
Query: 233 LVETTPKKSHSEDPWIFFTVTINNWDWCGTGPLFLTFLVGCSFSGYKNLAKHDKKAGGLEVGRLGDFPTPASKGRASFSGEQKGRDKSTKELKAEGGE 526
LVETTPKKS S +FFTV INN D+CGTGP FLTFLVGCSFSGYKNLAKHDKKA GLEVGR GDF TPASKGRA +SGEQKGR+KSTKELKAEGGE
Sbjct: 273 LVETTPKKSRSG---VFFTVMINNRDYCGTGPFFLTFLVGCSFSGYKNLAKHDKKAAGLEVGRSGDFSTPASKGRAHYSGEQKGREKSTKELKAEGGE 367
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 134 bits (338), Expect = 3.630e-31 Identity = 77/158 (48.73%), Postives = 91/158 (57.59%), Query Frame = 2
Query: 785 RTGGNQVGSAPSNGAAASTRKAIPGAPDPAKAHGYCFGFGADGEGLAEKLKRVFPDEDG--DGSSTPEGCTIRTQVRRGGSDEGQKLWKLDQEGHLILPAHDTNATKGHPRCQIGGTVPVEKVNGSWHLITWAIPLVAKGEVMSSITHNECLNGAGKK 1252
R G NQVGSAPS+GAAA RK IPG +P KAHG+CFG GA G GLA+KL F E G +G T GC G EG+ W+ D+ LILP H T GHPR IGG V VEKVN SW L W + + ++ IT N+ NGA +K
Sbjct: 221 RGGANQVGSAPSDGAAAKMRKPIPGQLNPVKAHGFCFGLGAGGVGLAQKLYDKFASEHGFEEGPITEGGCET-PNFSEAGVTEGKSKWEHDEHDKLILPVHSGIRTDGHPRYVIGGCVSVEKVNESWRLCHWVLKYILARRIVPKITQNQRHNGAPEK 377
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: A0A6H5JAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK8_9PHAE) HSP 1 Score: 121 bits (304), Expect = 5.230e-26 Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 1
Query: 1 AQ*GGSSRRGAARNVEVGSAEDERVRTEAADTTHVECTMALPLWDVVAIVARKDTLFEQGLWLLGSTI*IAKAGSKVS 234
AQ GS RRGA R VEVGSAEDERVRTEAADTT+V+ TMALPLWDVVAI+A KDTLFEQGLWL G+TI IAK GSKVS
Sbjct: 194 AQSAGSGRRGATRIVEVGSAEDERVRTEAADTTYVQSTMALPLWDVVAIMAGKDTLFEQGLWLFGNTIGIAKVGSKVS 271
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 1.840e-13 Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = 2
Query: 233 LVETTPKKSHSEDPWIFFTVTINNWDWCGTGPLFLTFLV--GCSFSGYKNLAKHDKKAGGLEVGRLGDFPTPASK---------------------------GRASFSGEQKGRDKSTKELKAEG 520
LV+T + +PW++ I NW++C +GP F+ + GC FSGYKNL KHDK G+EVGR GDF TPA+K G +++ +++G +KST E K EG
Sbjct: 231 LVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGC-FSGYKNLGKHDKTTRGMEVGRSGDFSTPATKAIATLREETVKHAAHQRTIDSGRTPLRGNVNYTAKERGAEKSTNERKGEG 354 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig626.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig626.22.1 >prot_P-littoralis_Contig626.22.1 ID=prot_P-littoralis_Contig626.22.1|Name=mRNA_P-littoralis_Contig626.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp MSFSSCRILSSMSEKRATLRTGGNQVGSAPSNGAAASTRKAIPGAPDPAKback to top mRNA from alignment at P-littoralis_Contig626:155632..158061+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig626.22.1 ID=mRNA_P-littoralis_Contig626.22.1|Name=mRNA_P-littoralis_Contig626.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2430bp|location=Sequence derived from alignment at P-littoralis_Contig626:155632..158061+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig626:155632..158061+ >mRNA_P-littoralis_Contig626.22.1 ID=mRNA_P-littoralis_Contig626.22.1|Name=mRNA_P-littoralis_Contig626.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=555bp|location=Sequence derived from alignment at P-littoralis_Contig626:155632..158061+ (Pylaiella littoralis U1_48)back to top |