prot_P-littoralis_Contig626.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig626.15.1
Unique Nameprot_P-littoralis_Contig626.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length59
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig626.15.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 8.620e-5
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0 
Query:    1 KEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLL 57
            K KKR+RC HTL+VA+F+ + G  ST + +G       A+  ASSGG  LPRTPQ+ 
Sbjct:  119 KNKKRARCAHTLVVAVFSRI-GLDSTASSTGE----GGAAAGASSGGSALPRTPQVF 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig626.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2H3_ECTSI8.620e-549.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig626contigP-littoralis_Contig626:105915..106091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig626.15.1mRNA_P-littoralis_Contig626.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig626 105913..106091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig626.15.1 ID=prot_P-littoralis_Contig626.15.1|Name=mRNA_P-littoralis_Contig626.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=59bp
KEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVL
PRTPQLLAK
back to top