prot_P-littoralis_Contig1160.1.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1160.1.3
Unique Nameprot_P-littoralis_Contig1160.1.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length313
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1160.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000254Cellulose-binding domain, fungalPFAMPF00734CBM_1coord: 261..282
e-value: 4.7E-5
score: 23.3
IPR000254Cellulose-binding domain, fungalPROSITEPS51164CBM1_2coord: 254..291
score: 8.647801
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..90
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 5.0
IPR035971Cellulose-binding domain superfamilySUPERFAMILY57180Cellulose-binding domaincoord: 259..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1160contigP-littoralis_Contig1160:26321..40256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1160.1.3mRNA_P-littoralis_Contig1160.1.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig1160 17837..40330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1160.1.3 ID=prot_P-littoralis_Contig1160.1.3|Name=mRNA_P-littoralis_Contig1160.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp
MTRAVSLLTLVMTLGSIAASCHAHKNDGKEGDKHGGDGDHSSRGDGGHQV
STDHQQHRNTRGLHHRHGHSHHGGHHHHGKHGRRHGKGAAVLTRRGRIAP
GRPVSVRCSPPVKESLFVVDLCECEGSGCEDGDYCGEFVATLGNDVPCIM
MTDDAECDFELVVPEEVRWCGEGSAGRQFRIRVTDENDDSYLSCSPPIEV
ASEEEDEEEEELSPCVIENVPLSSDDETGRNDDGTDCEWVGTTSSDDDED
DCVYLVEPEHQCGGCDYKGSTCCTPGYECMEMGVDYYECCLEGIDFKKMN
QPPPPSRPQGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000254Cellulose-bd_dom_fun
IPR035971CBD_sf