prot_P-littoralis_Contig625.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig625.16.1
Unique Nameprot_P-littoralis_Contig625.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length199
Homology
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: D7G6W9_ECTSI (60S ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W9_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.980e-129
Identity = 186/198 (93.94%), Postives = 194/198 (97.98%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFGF 198
            MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIP+PYDKKKRMVVPNALQVI+MAPGRRFCVLGRLSEEVGWPH +LIKRLEAQRKIKSEAYYV+KK AKQLK+KA AEA+L AVAPVLE++GF
Sbjct:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A835Z9N1_9STRA (60S ribosomal protein L13a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N1_9STRA)

HSP 1 Score: 288 bits (736), Expect = 1.250e-96
Identity = 141/197 (71.57%), Postives = 170/197 (86.29%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFG 197
            + E PV VDGRGHLLGRLAS+VAK+LL GQKV+VVR EQI ISGSLVRNKVKY Q++KKR NTNP RGP+HFRSPARIFWRT+RGM+P KT RG+ A+ARL  FEGIP+P+DK+KRMVVP AL+V+++APGR+ CVLGRLS EVGW HGDL++RLEA+RK++SEA+Y +KK   QL+ KA A ADL+AV PVLE +G
Sbjct:    2 VLEKPVVVDGRGHLLGRLASIVAKQLLSGQKVIVVRAEQIVISGSLVRNKVKYAQFRKKRMNTNPARGPFHFRSPARIFWRTIRGMIPHKTHRGQLAMARLKAFEGIPAPFDKQKRMVVPAALKVLRLAPGRKHCVLGRLSTEVGWRHGDLVERLEAKRKVRSEAFYQKKKANAQLRVKAEAAADLSAVTPVLESYG 198          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A7S0LS12_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS12_9EUKA)

HSP 1 Score: 257 bits (656), Expect = 1.570e-84
Identity = 127/183 (69.40%), Postives = 151/183 (82.51%), Query Frame = 0
Query:    6 VTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTA 188
            V +DG+GHLLGRL S++AK+LL G+KVVVVRCE + ISGSL RNKVKY Q+ KKR NTNP RGP+HFRSPARIFWRT+RGMLP KT RG+ ALARL+CFEGIP PYDKKKR+VVP+AL+ +++   R F VLG LS+EVGW + DL+ +LEAQRKIK +AYY EKK    LK KAAA ADL+A
Sbjct:   12 VVIDGKGHLLGRLCSIIAKQLLFGKKVVVVRCEALIISGSLTRNKVKYAQFMKKRMNTNPNRGPFHFRSPARIFWRTLRGMLPHKTVRGQSALARLACFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQVALKSKAAASADLSA 194          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A5J4Z3W8_PORPP (60S ribosomal protein L13a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W8_PORPP)

HSP 1 Score: 257 bits (656), Expect = 1.800e-84
Identity = 128/197 (64.97%), Postives = 153/197 (77.66%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFG 197
            M+E+ V VD R HLLGRLAS+VAKELL GQKVVV RCE I +SG  +R K KY+ + +KR NTNP RGP+HFR+P+RIFWRTVRGMLP KT RG+EAL RL  FEGIP PYDK KRMVVP+AL+V+++AP R+ CVLGRLS EVGW + D++ RLE +RK+ S AYY  KK   +LK KA   ADL+ V PVLE FG
Sbjct:    1 MYESVVVVDARAHLLGRLASIVAKELLCGQKVVVTRCEAIEMSGRFIRKKNKYLMFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTERGQEALGRLKVFEGIPPPYDKMKRMVVPDALRVVRLAPRRKHCVLGRLSHEVGWKYQDVLARLETKRKVHSAAYYQRKKALDKLKRKATESADLSKVTPVLEAFG 197          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.980e-84
Identity = 129/196 (65.82%), Postives = 161/196 (82.14%), Query Frame = 0
Query:    6 VTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKG---AKQLKEKAAAEADLTAVAPVLEQFGF 198
            V +DGRGHLLGRL+S+VAKELL GQKVVVVRCE++ ISG LVRN  +YMQ+ +KR NTNPKRGP+H+R+P+RI WRT+RGMLP KT RG +ALARL+ FEGIP+PYD KKR+VVP AL+++++ PGRRFC L RL+ EVGW H DL+ RLEA+RKIK+EAYY +KK    AK L E+ AA ++L+AV  VL  FG+
Sbjct:    8 VVIDGRGHLLGRLSSIVAKELLSGQKVVVVRCEELMISGGLVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAA-SELSAVNNVLAGFGY 202          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: F0Y3B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B4_AURAN)

HSP 1 Score: 254 bits (649), Expect = 2.160e-83
Identity = 128/197 (64.97%), Postives = 154/197 (78.17%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFG 197
            +F+  V VDGR H+LGRLAS++AKELL GQKVVVVRCEQ+ +SGSLVRNKVK+  + KKR NTNPKRGP H+RSPAR+ WRTVRGMLP KT RG++ALARL CFEG+P PYDK K+MVVP AL+V+++ PGRRF VL RL+ E GW H  LI ++E +R  +S  +Y  KK A  LK KA A ADL+ VA VLE FG
Sbjct:    2 VFQDSVLVDGRTHMLGRLASIIAKELLCGQKVVVVRCEQLCVSGSLVRNKVKFTAFLKKRTNTNPKRGPIHYRSPARMLWRTVRGMLPHKTHRGQQALARLQCFEGVPPPYDKMKKMVVPEALKVLRLKPGRRFTVLARLASEFGWKHEALIAKMEEKRVARSAEFYAAKKSATALKAKATAAADLSKVADVLEAFG 198          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A6V1NQ00_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQ00_HETAK)

HSP 1 Score: 253 bits (645), Expect = 8.480e-83
Identity = 131/197 (66.50%), Postives = 157/197 (79.70%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFG 197
            MFE  V VDGRGHLLGRLAS+VAK+LL GQKVV+VR E+I +SGSL+R K ++ Q+ KKR NTNPKRGP HFRSPA+IFWRTVRGM+P KT RG  A+ARL CFEGIP P+DKKKRMVVP AL+V+++   R+   LG L+ EVGW    LI+RLEA+RKI+S+AYY++KK A  LK KAAAEADL+ VA VL   G
Sbjct:    1 MFEDTVVVDGRGHLLGRLASIVAKQLLCGQKVVLVRAEEIVMSGSLIRKKTQFAQWLKKRTNTNPKRGPIHFRSPAKIFWRTVRGMIPHKTVRGTAAMARLQCFEGIPHPWDKKKRMVVPEALKVLRLKAHRKNTKLGTLAGEVGWEKAGLIERLEAKRKIRSQAYYLKKKAAVVLKTKAAAEADLSPVAAVLAPLG 197          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A7S2DZL3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZL3_9STRA)

HSP 1 Score: 253 bits (645), Expect = 9.070e-83
Identity = 128/200 (64.00%), Postives = 158/200 (79.00%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKA--AAEADLTAVAPVLEQFGF 198
            M E  + VDGR HLLGRLASVVAKELL GQKVV+VRC+Q+ ISGSLVRNKVKY Q++KKR NTNP +GPYHF+SPA++ WRT+RGM  +KTARG+EALARLS FEGIP PYDKKKR V+P AL+V+++ P R + VLG L+  VGW H DL+KRLE +RK+++ A+Y +KK   QL+EKA  AA  +L  V  VLE  G+
Sbjct:    1 MLENTIIVDGRDHLLGRLASVVAKELLSGQKVVIVRCDQVCISGSLVRNKVKYAQFRKKRMNTNPSKGPYHFKSPAKMVWRTIRGMCHQKTARGQEALARLSTFEGIPHPYDKKKRQVIPAALRVMRLKPSRNYTVLGELANAVGWKHQDLLKRLEDKRKVRAAAFYEKKKAKTQLREKAEKAAAGELAKVNEVLEASGY 200          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A7S1TQI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI9_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.770e-82
Identity = 126/199 (63.32%), Postives = 159/199 (79.90%), Query Frame = 0
Query:    1 MFEAPVT-VDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFGF 198
            MF    T +D RGHLLGRLAS++AKELL GQKV VVRCE+I ++GSL+RNKVK+  Y++KRH TNPK+GP H+RSPAR+ WR VRGMLP KTARG+ ALARL+ FEGIP+PYDKKKR+VVP AL+V+++ PGR+F VL  L+ EVGW H DLI+RLE +RK++++A+Y +KK A   K  A A  DL+AV PVLE  G+
Sbjct:    1 MFSPNATLIDARGHLLGRLASIIAKELLCGQKVTVVRCEEICVTGSLLRNKVKWANYRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 199          
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Match: A0A7S1TDT8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT8_9RHOD)

HSP 1 Score: 249 bits (636), Expect = 1.980e-81
Identity = 122/198 (61.62%), Postives = 154/198 (77.78%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGDLIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFGF 198
            MF  PV VDGRGHLLGRLAS VAKELL GQ+VVVVRCE I  SG  +RNK KY+ + +KR NTNP RGP HFRSP+++FWRTVRGMLP KT RG +ALARL  FEGIP+PYDK KRMVVPNAL+V+++ P R++C LGR++ EVGW + D++ RLEA+RK+ SEAYY +KK   +L+ +A A A +  +   L+ +G+
Sbjct:    1 MFSGPVVVDGRGHLLGRLASTVAKELLNGQQVVVVRCEDIDQSGKFIRNKNKYLIFLRKRMNTNPTRGPIHFRSPSKMFWRTVRGMLPHKTQRGADALARLKVFEGIPAPYDKTKRMVVPNALRVLRLRPDRKYCRLGRIASEVGWKYADVVDRLEAKRKVSSEAYYEKKKAEGKLRVQAKANAAIQEMETKLQNYGY 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig625.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W9_ECTSI2.980e-12993.9460S ribosomal protein L13a n=2 Tax=Ectocarpus TaxI... [more]
A0A835Z9N1_9STRA1.250e-9671.5760S ribosomal protein L13a n=1 Tax=Tribonema minus... [more]
A0A7S0LS12_9EUKA1.570e-8469.40Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A5J4Z3W8_PORPP1.800e-8464.9760S ribosomal protein L13a n=1 Tax=Porphyridium pu... [more]
W7TSL6_9STRA2.980e-8465.8260s ribosomal protein l13a n=1 Tax=Nannochloropsis... [more]
F0Y3B4_AURAN2.160e-8364.97Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6V1NQ00_HETAK8.480e-8366.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DZL3_9STRA9.070e-8364.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1TQI9_9STRA1.770e-8263.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1TDT8_9RHOD1.980e-8161.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 6..110
e-value: 1.2E-26
score: 93.2
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 5..184
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 5..138
score: 20.125931
IPR005822Ribosomal protein L13CDDcd00392Ribosomal_L13coord: 8..107
e-value: 1.21487E-41
score: 134.554
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 7..146
e-value: 1.4E-53
score: 179.0
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF360S RIBOSOMAL PROTEIN L13A-RELATEDcoord: 5..184
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10Ribosomal protein L13coord: 1..148
e-value: 3.0E-57
score: 194.7
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 7..147
NoneNo IPR availableGENE3D6.10.250.3250coord: 149..198
e-value: 4.2E-10
score: 41.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig625contigP-littoralis_Contig625:29281..34594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig625.16.1mRNA_P-littoralis_Contig625.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig625 29281..35334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig625.16.1 ID=prot_P-littoralis_Contig625.16.1|Name=mRNA_P-littoralis_Contig625.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=199bp
MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNK
VKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALAR
LSCFEGIPSPYDKKKRMVVPNALQVIKMAPGRRFCVLGRLSEEVGWPHGD
LIKRLEAQRKIKSEAYYVEKKGAKQLKEKAAAEADLTAVAPVLEQFGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR005755Ribosomal_L13_euk/arc
IPR036899Ribosomal_L13_sf