mRNA_P-littoralis_Contig624.35.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig624.35.1
Unique NamemRNA_P-littoralis_Contig624.35.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: D7FQ53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ53_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 1.040e-134
Identity = 190/222 (85.59%), Postives = 204/222 (91.89%), Query Frame = 2
Query:  212 MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
            MDG QEVDAEYE+RMRTFESDCNDGKGNAVACHQVGE+LSVVKNDF KAG+IF+ NCN+R+HAPSCFNLGR LLAGKGLPQSD++AEKVF+SACGKD       LGFMHLYGGEGFK DI KAI+VLDTSCSGGLADSCNMLAKQLLR DGKGP PRDPPRA+ LLEKGCSHNHGPSC+NLTVMLKKGDEGVPSDY+KYRE R+KTE LAAQLQGIDGNKQA
Sbjct:    1 MDGFQEVDAEYEDRMRTFESDCNDGKGNAVACHQVGEYLSVVKNDFDKAGRIFEANCNTRNHAPSCFNLGRFLLAGKGLPQSDAQAEKVFDSACGKDHQPACLHLGFMHLYGGEGFKRDIKKAIEVLDTSCSGGLADSCNMLAKQLLRHDGKGPVPRDPPRARGLLEKGCSHNHGPSCFNLTVMLKKGDEGVPSDYKKYREYREKTESLAAQLQGIDGNKQA 222          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: W7TNA5_9STRA (Hcp beta-lactamase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA5_9STRA)

HSP 1 Score: 164 bits (415), Expect = 4.070e-43
Identity = 90/229 (39.30%), Postives = 122/229 (53.28%), Query Frame = 2
Query:  212 MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEG---FKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYN------LTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
            ++GLQ +D EYEERM  FE DC+ GKG+A ACH VGEFL+VVK D+ KA K++  NC    H PSCFNLGR+ L G+G+PQSD+ + K F+++C          +G + LYG +G      D+ KA  +L+ +C  G+ DSC  LA  LLR       P D                            L VM KKGD G+P + Q++ + +  TE L  Q   +   K
Sbjct:    2 IEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRH-----LPEDKSHXXXXXXXXXXXXXXXXXXXXXXXXXLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A7R9UGB8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB8_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.290e-40
Identity = 86/228 (37.72%), Postives = 122/228 (53.51%), Query Frame = 2
Query:  230 VDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCS--GGLADSCNMLAKQLLRK---------------DGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGID 862
            VD EYEERM  +E DC +GKG   AC    EF SVVK D  +A  IF+ NC    +  SCF+  R L+ GKG  QSD +A + F+ +C  +        G +    G G + D+ +A+K  +++C   G + ++C   A QLL+                D +   PR+P  A+ LLE+GC   HG SC+NL VM K GD+GVP+D  K++E + +TE L      +D
Sbjct:   63 VDKEYEERMAAYEIDCAEGKGEPYACQCAAEFFSVVKGDHPRAYTIFKRNCLENRYGASCFSTARALITGKGAEQSDEQAFEYFDKSCQLEYAPGCYHAGLLRR-AGLGTRKDVPEALKNFESACQDPGNIPEACYEKALQLLKPLEEAQSKKSSWFSWGDDRSSVPRNPEEARKLLERGCRQAHGASCFNLAVMYKNGDDGVPADAAKFQEYKKETERLIKAQGSMD 289          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A3R7G934_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G934_9STRA)

HSP 1 Score: 147 bits (371), Expect = 6.660e-37
Identity = 88/223 (39.46%), Postives = 114/223 (51.12%), Query Frame = 2
Query:  209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
            S   +Q V+ + EER   F S+CNDG G+A ACH  GE+L+VV  +   A K++++NCN  D+  SCFNLGR+ LAGKG+ Q+D EA ++FE AC +    XXXX                                     +A   L      P  R+   AK  LEK C  N  P+C+NL VM KKGD  +P D QKY+E R KTE L  Q  G+   K A
Sbjct:    8 SAADVQRVNQQLEERHYEFRSNCNDGDGDASACHSWGEWLAVVDKNHKDAAKMYELNCNKNDYPASCFNLGRLRLAGKGVDQNDHEAFRLFEKACAEGHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVANMYLSPAVNSPIKRNVLEAKTYLEKACDANFAPACHNLAVMYKKGDVSIPKDEQKYQEYRAKTEKLIEQAGGMSSIKSA 229          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: F0WJI5_9STRA (Hcp betalactamaselike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJI5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.300e-36
Identity = 80/234 (34.19%), Postives = 125/234 (53.42%), Query Frame = 2
Query:  188 AHR*RYKSMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLL------RKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
            +H    + +DG+ +     E+R+  F+++C++GKG+ +ACH  GE+L+VV+ D+  A ++++ NC    +A SCFNLGR+ LAGKG+ ++D +A ++FES+C K           M+L G  G   D+ + +  L            + +    L       K+      RDP RAK    + C  N  P+CYNL VM K GD GV  + + Y E + KTE L  Q +G+ G K
Sbjct:    8 SHEPSAEEVDGVNQA---IEDRLHEFKANCDNGKGDPMACHSWGEWLTVVEKDYNSAAEVYRKNCEQNCYAASCFNLGRLTLAGKGIEENDEKALELFESSCAKKHAQACQHAALMYLEG-IGTSKDVLRGLAGLXXXXXXXXXXXXSRVGSFYLDPPKIENKEQSKKLQRDPIRAKKYYGRACDANFAPACYNLAVMFKNGDTGVDKNEELYEEYKKKTEQLVNQAKGMLGVK 237          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A662Y1C3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1C3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 7.820e-34
Identity = 81/227 (35.68%), Postives = 110/227 (48.46%), Query Frame = 2
Query:  206 KSMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEK---VFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
            +S   ++ V+ + EER   F S+CNDG G+A ACH  GE+L+VV  ++  A  ++++NC+  ++  SCFNLGR+  A     +S S A +    F+ AC  D                                      A+SCN +A   L         RD P+AK  LEK C  N  P+C+NL VM KKGD G+P D  KY E R KTE L AQ  G+   K A
Sbjct:    7 RSAAEVKRVNQQLEERHYEFRSNCNDGAGDASACHSWGEWLAVVDKNYKDAAAMYELNCSKNNYPASCFNLGRLKRASIWQKRSLSTAFEGLAAFKEACEYDD-------------------------------------ANSCNRVASMYLSPPAGSAIKRDAPQAKTFLEKACDANFAPACHNLAVMYKKGDAGIPKDETKYEEYRQKTEDLIAQAGGMSSIKSA 196          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A5D6XP75_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP75_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.970e-33
Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 2
Query:  221 LQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRK-DGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRE 814
            +Q V+ + E+R   F S+CN G G+A ACH  GE+L+VV  ++A A +++Q+NC   ++A SCFNLGR+ LAGKG+  +D+EA  +F  AC                        ++ K ++    +C    A SCN +A   L      GP  RDP  AK  LE+ C  N  P+C+NL VM KKGD GV    +++ +
Sbjct:   12 VQRVNEQLEQRHYEFRSNCNGGDGDASACHSWGEWLAVVDKNYAGAAEMYQLNCAKNNYAASCFNLGRLKLAGKGVETNDTEAINLF-GAC-----------------------VNVLKGLEAFKEACERDDASSCNRVASMYLSTMAATGPIARDPLLAKRYLERACDANFAPACHNLAVMYKKGDSGVEQSEERFED 186          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A0P1AVW2_PLAHL (Uncharacterized conserved protein (Contains TPR repeat) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVW2_PLAHL)

HSP 1 Score: 135 bits (340), Expect = 1.320e-32
Identity = 86/221 (38.91%), Postives = 111/221 (50.23%), Query Frame = 2
Query:  209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
            S   ++ V+ +  ER   F S+CNDG G+A ACH  GE+++VV  ++  A  I+++NC+   +  SCFNLGR+LLAGKGL QSD +A  +F  AC   XXXXXXX                                     +A   L      P  R+  +AK  LEK C  N  P+C+NL VM KKGD G+  D  KY E R KTE L  Q  GI   K
Sbjct:    8 SASEVKRVNQQLRERHYEFRSNCNDGDGDASACHSWGEWVAVVDKNYKDAATIYELNCSKSGYPASCFNLGRLLLAGKGLEQSDPDAFDLFGKACAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVATMYLSPASNSPIERNIQQAKTYLEKACDANFAPACHNLAVMYKKGDVGISKDQSKYEEYRAKTEKLIEQAGGISSIK 227          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A8K1FNS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNS0_PYTOL)

HSP 1 Score: 131 bits (329), Expect = 4.780e-31
Identity = 79/222 (35.59%), Postives = 109/222 (49.10%), Query Frame = 2
Query:  215 DGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQL---LRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
            D ++ V+ + EER   F S+CNDG+G+A ACH  GE+L+VV  ++  A  ++ +NC+  ++  SCFNLGR+ LAGKG+  +D++A  +FE +C      XXXX                                         L   +  + + P  RD   AK  LEK C  N  P+C+NL VM KKGD GV     KY E R KT  L AQ  G+   K
Sbjct:   10 DEVRRVNQQLEERHYEFRSNCNDGEGDASACHSWGEWLAVVDKNYKDAAAMYALNCDKNNYPASCFNLGRLKLAGKGVEMNDTDAIDLFEKSCKGGHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGAMSAESRNPIKRDAVMAKTYLEKACDANFAPACHNLAVMFKKGDVGVEQSDAKYEEYRKKTNDLIAQAGGMSSVK 231          
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A024FSW8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FSW8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.050e-30
Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 2
Query:  209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSC-------------NMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
            S + +  V+ E E+R   F ++C+DG+G+ +ACH  GE+L+VV+ D+  A  +++ NC  + +A SCFNLGR++LAGKG+ ++D +A ++FE +C K  XXXXXX                                                N    +LL+        RDP RAK    K C  N  P+CYNL VM K GD GV  + + Y E + KTE L  Q +G+ G K A
Sbjct:   12 SAEEVDHVNQEIEDREHEFRANCDDGEGDPMACHSWGEWLTVVEKDYTSAANVYRKNCEEKCYAASCFNLGRLMLAGKGVEENDEKALELFERSCAKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPPAMENGEQSELLQ--------RDPIRAKKYYAKACDANFAPACYNLAVMFKNGDTGVEKNEKMYEEYKKKTEQLVKQAKGMLGVKVA 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ53_ECTSI1.040e-13485.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TNA5_9STRA4.070e-4339.30Hcp beta-lactamase-like protein n=2 Tax=Monodopsid... [more]
A0A7R9UGB8_9STRA1.290e-4037.72Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A3R7G934_9STRA6.660e-3739.46Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
F0WJI5_9STRA2.300e-3634.19Hcp betalactamaselike protein putative n=1 Tax=Alb... [more]
A0A662Y1C3_9STRA7.820e-3435.68Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A5D6XP75_9STRA2.970e-3337.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AVW2_PLAHL1.320e-3238.91Uncharacterized conserved protein (Contains TPR re... [more]
A0A8K1FNS0_PYTOL4.780e-3135.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024FSW8_9STRA1.050e-3034.75Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig624contigP-littoralis_Contig624:157094..162360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ53
Preferred nameCOA7
PFAMsSel1
Model size1914
Max annot lvl2759|Eukaryota
KEGG rclassRC00063,RC02819
KEGG koko:K00772,ko:K18180
KEGG ReactionR01402
KEGG Pathwayko00270,ko01100,ko04714,map00270,map01100,map04714
KEGG ModuleM00034
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons6
Evalue1.94e-141
EggNOG OGsCOG0790@1|root,KOG4014@2759|Eukaryota
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_007450.1
EC2.4.2.28
DescriptionSel1 repeat
Cds size669
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig624.35.1prot_P-littoralis_Contig624.35.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig624 157305..161326 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791303.3255315-UTR-P-littoralis_Contig624:157093..1573041680791303.3255315-UTR-P-littoralis_Contig624:157093..157304Pylaiella littoralis U1_48UTRP-littoralis_Contig624 157094..157304 +
1680791303.4079518-UTR-P-littoralis_Contig624:161326..1623601680791303.4079518-UTR-P-littoralis_Contig624:161326..162360Pylaiella littoralis U1_48UTRP-littoralis_Contig624 161327..162360 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791303.3380976-CDS-P-littoralis_Contig624:157304..1573451680791303.3380976-CDS-P-littoralis_Contig624:157304..157345Pylaiella littoralis U1_48CDSP-littoralis_Contig624 157305..157345 +
1680791303.3492694-CDS-P-littoralis_Contig624:158778..1589571680791303.3492694-CDS-P-littoralis_Contig624:158778..158957Pylaiella littoralis U1_48CDSP-littoralis_Contig624 158779..158957 +
1680791303.3586085-CDS-P-littoralis_Contig624:159461..1595121680791303.3586085-CDS-P-littoralis_Contig624:159461..159512Pylaiella littoralis U1_48CDSP-littoralis_Contig624 159462..159512 +
1680791303.3767583-CDS-P-littoralis_Contig624:160022..1601051680791303.3767583-CDS-P-littoralis_Contig624:160022..160105Pylaiella littoralis U1_48CDSP-littoralis_Contig624 160023..160105 +
1680791303.3858788-CDS-P-littoralis_Contig624:160403..1606301680791303.3858788-CDS-P-littoralis_Contig624:160403..160630Pylaiella littoralis U1_48CDSP-littoralis_Contig624 160404..160630 +
1680791303.3986044-CDS-P-littoralis_Contig624:161238..1613261680791303.3986044-CDS-P-littoralis_Contig624:161238..161326Pylaiella littoralis U1_48CDSP-littoralis_Contig624 161239..161326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig624.35.1

>prot_P-littoralis_Contig624.35.1 ID=prot_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAG
KIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDHQP
ACLHLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKD
GKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYR
ELRDKTEGLAAQLQGIDGNKQA*
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mRNA from alignment at P-littoralis_Contig624:157094..162360+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig624.35.1 ID=mRNA_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5267bp|location=Sequence derived from alignment at P-littoralis_Contig624:157094..162360+ (Pylaiella littoralis U1_48)
ACCCCTTTCTAGTTTCTAGCAGAGACTATGACTGGTTATGTCATAGTCTT TGGTTTCTAGCACATTTAATAGGCCCACTCTTTTAGTCAGGCAGTTAAGC CAGTTTTCAGTTTTCAGCTCCCGTCACATTAGTCAGTCAGTTCCACGCGT GGCAGCCCCCCCGCTGACAACAGAGGGGCAGTGCAGAGCTCACCGCTGAC GATACAAAAGCATGGACGGGCTCCAGGAGGTAGACGCGGAGTATGAGGAG CGGTGAGTTCCGTTACGGGTCCTGATATGAATTTGCTTGCCGCGTCTATC GATCAGAGAAACCCTGTCGTATGATATGGTGTGACTCTGTTTGGCTACAT CTCCGGTGACTTGACCCTGCTGTTGGGACTGACATGGCAGGGCAGCGCCG ATCCAGCAGCAGGGTATGGTGCTTCGGTAGCCTGGGCTCCCGCTGCCTTT GCGAAAGAACTCCGTTCTCTTTGTCGCTGAAATGGGTGTTGTTTCGATCT GAAATATGTTATCGTACAAGTCAGTGAAACACCTTTCTCCACGCAAGGGC ATCGAACAAGGTGTTGCTGCTGACTCACAGAACCCAGAGATACTATCGCG GGTGGATGTCTTTCCCCGCGGATACCTCTTCGTCCCGACTTTCAATGGTA GTGTAGGTCCTCTATATTCCACTGACTGCTGTATCTCAGGCTCCATGTAC ATGCAGCCAGCACGTATATATGTTGATGTGTGTACCAAACAGGCTTTATT CTTCGAAGTCTATCTGCACGGTGATCCTTACGAGTATACTGTAATCTATT CTACGAAACATATTGCCCAAACATACGTATTTCCACAATGCAGAGTTCTA TTATCCACCAGACCTCGTCCCCTGCTATTCCGCACGAGGCATTCGCAAAC CTGCGTGGCCTCCATCTGCCTGGTCGGGATATGGAACACGAACAGCCGGG GATAGTCGGGCTATATTTTGTGTAACACAGAGCGTTCATTTTACATAAAT TATTCAATCATTAGGACCGTTTGGCGATTGCAATTTTCAATTTCGTTGTA ACCGTACACCATTACCACGACAACATCAATAGTACTGCTGTGGAGTTGGC CTTCATATCATGTGGTGTACACCACCACTAAACGCTGGTAGAAGACAGAC TCCTCTCGTCACCGGAGGTACGACACATCTCCGCATGCAGACCGCACGCT CTCGGAGACGTCGTTTATTTCCTTTTCGCCCCCTTTCCCTTCATCTCCTT GGATAGTTTTTCGTATGCTCTTACTCTCGCATATATCATCTTCTGAATAC GCCTTTAGTTTCTGGTTGTTTTTCTTTCTATTATTTTCGACCCGGTTTAT CTGTATTTTTGTGTTTCGGTCACAACAAACGAAACCCCTGGTTGGGCGGT ATCTATGCCTGTCTTTTTTTTCGTGTATTTTTCCTCCTGACACGATGCGT GCCCGGTTCGTGACCACGGGCTACACTCTGTCGGTGAGCTTAGGAATCAA CAACATCCAAGCTTGGTGTCCCAGAGAATTAATCACGAACGAGTTCTCAG ATCACCAAAAAAGGCGTGAAATGACCGATACCTTTGATTTCACTTACAAC TGCGTAGACCCGGCGTAGACCCGCACAGCACAAAACCGAAGACTTCGTTC ACATGCACCCCATCATCCACGCCGCGTGCACGCAGGATGCGAACGTTCGA GAGTGACTGCAACGACGGCAAGGGCAACGCGGTGGCGTGCCACCAGGTGG GCGAGTTCCTCTCCGTGGTGAAGAACGACTTCGCCAAGGCCGGAAAGATC TTCCAGATGAACTGCAACAGCAGAGATCACGCGCCGTCCTGTTTTAACCT CGGCCGTGTCTTGCGTGAGTCGCAAGAGAAGGGTCTCCTTTACCATGCGT TATTGCCACGGTTGTTTCTCGTCGAAAGTGCCCTGAGAGTTGTGCCCTGC TGTACAAGTTTTATGGGACGACGCCCTAAGTCAAGCAAGGAATGCGCATG CGTATGTTGCCGAGCTTTTTACTTGTCTTTTTGGAGGCGCACGCACGAGT GTAAAGCCGTGCGCCGGTAATGGTGCCGCAACCCACCCACCCACTCACCC TCACCCCGAAATCATGAATTGAAATCGGCCCCCAAGAGTATCAGCCGGGC CACACGTGGGGGAGTCCTTTTTCATATGCTGACCCACCAACAAGCGGGCG TCAGACCATAAAACAAGCACCCAACCTAACCTCCCGCTCGACCGTCCATC ATGCCTGCCTTGTTCCCTCCTCCCTCGGTTGTCGTCACTTGTTGTTTCGT TTTCGCCCTTCTCGTCCCGTCGCCCGTTCCCTCTTGCCGCGACTCAAAAC GATACCAAAATACAACAGTTGCCGGTAAAGGTCTGCCCCAGTCGGACTCC GAAGCCGAGAAAGTTTTCGGTGAGGCGTGCGGTTGGTCGTTTTTGGCTGC GCGATGACGTCAAACGCTTTAATTCACGCATGAGCAAGGAGACGAGTCGT ATGATAGCGCCCGCACCCCCGAGGCGTATACTGCTGTTCGACGTTTCGCA GGATTGGTTTCATCTGCACGTCCCGTGTTTATATCCCGGTCCATTGGAAC GGAGCGCCGGTGTCTTGTGGAGCTGTACATCGCGAACCCTTCGAATCGTT GTACCTTATAGCCCCACAAAATATCGGCGGCGCACGAGCGCATTGTATAA GCTGGGTGAAATTTTTGTGCTTGAAACTTTGCTACAGTGCGTACTGTAGG CCTGATTTTGATTACAGGCGTCAGCGGGTGCTGGCGATGAGTTTCATGAG AACGGTAGTTTCGACTGGGCGATACCGTACCATGCTGCTTTATACTTCGA AGTATAAGCCAGTGCCAGTTACTGTACTGCGTTCAATTGTGGGCACCTGA TATCACTTCGCTGGGTGTGGTTTTGGCAGAGTCGGCCTGCGGGAAAGATC ACCAGCCGGCATGTCTGCACCTCGGCTTCATGCACCTCTACGGTGGAGAG GGGTTCAAGGCGGTACGTTTGACTGCGTGTGCGTTGATTTCTTATCGGTC GTTTTGTGCACACGTGCGAGCTCAGCCAAAAAACTCAGCCCCCAGTCACA AGCGAGCTACCGAAACAAACTCGCTCAAACGGAGTCACAGTCATACGTAG AGAGGGAGCACACCCCAACATAGTTGGTCCGGGTGTGCCGCCAACGACAC ACGCACAGAGCTTCGGTGGGAGGCGAACAAGCAAACTGTTCGCAAGAGAC AGCGAACACCCTTACCCACACCCTTCCCAACCCCCTCAACCATCCCCTTC GTGCGCCCAGGATATCAACAAAGCGATCAAGGTTCTCGACACATCTTGCA GCGGAGGCCTGGCGGACTCTTGCAATATGCTGGCGAAGCAGCTCCTCCGG AAAGATGGGAAAGGGCCGACCCCAAGGGACCCTCCAAGGGCAAAGGCGTT GCTCGAGAAGGGGTGCTCGCACAACCACGGGCCGTCGTGCTACAACCTGA CGGTGATGCTCAAGAAGGGCGACGAGGGGGTTCCCAGGTGCGCGTGCGTG AGTGGTTTGTGTGTCAAACGATGGCGTTTTTCGTTGCTGTCGAACTGTTG GATAGCCACGATTTTTGTCGGCGGCGGGTTTACGTCATGTATCCATTGCT CGACCAGTGGATCTCTGCTTCTACTTCTCGTGTTCCTCATTTGAATCGAA AGCGCTACGGGCATGAAAAGCCATCCGTGTCCGCCTCCGATTCCGGACCG TAAGGAGGACCACCGTATGCGCCAACGCATTGGAACGACGTTGTGTTGCT GTATCATGCGATCTGTTGATTCCCGAAATCCTGCGTGCCCATTCTTTCGG GGGGGGGGGGGGTAACAACACAGACAATTCAGAGACTGAAGTTTGCATTT GCGCTTCAGCCGCCTTCTGTGTGTCTACCGTATTCGTAGGATTGCATGCA TGTATGTTTGTACCTGTTTGTACCTGTGTGTCACGTTTACGCGCGACTGC GCGCATCGTTCTGACGAACGCCTGCGGCACGCGGCGGTACCACGTTTGGT ACCCCTGCATTGAAACGGGCCCCCCGGCCCCCAAACCAAACGCGCACCGC TTCCGTTTGCTGCGTTACTTGTTGGCAATCTCCATCAATTTTCAGCGACT ACCAGAAGTACAGAGAGCTCAGAGATAAGACAGAGGGCCTCGCGGCGCAA CTTCAAGGCATCGACGGCAACAAACAGGCGTAGATATGCGCGGGCGATGC GTTGTCTGAAAAGGTAGTTTTTGTTGATGTTCCTCGATTCTCGCCAGTTT TTTTTTCTGGATTAGTTTTTGTTTTCGGCGAGCTGAAGATGAACGTCGAC GTGTGGTGGCTCAAAGCCACAAGCCGCGATATGTTGACATGTTGTGTACA AGTTGAAAGTAGAGCGTGTGGTGCAGCCTAGTATGCAGCGCAGAGAGAGG AAAGGTGCCCGCAGTTCTCTGATTGGCCAATTTTTTTGAAAGGAGATTTC TGATTGGCCAAAAATCCCTGGTCGACATGACGTGTCATCCACGGCGGCTT CACCTTTTATCTCTTTCTACGGGTATACGATTCGGTGGTGACGGACATTC AAAGGCTGCCACCCGCCCTTTGGAATGTCTCTCTGGAGGTGAAACCCTTA AATGTTTGTCTCCGAGACGCGTCTTGTTGTCGGAAGTCGCCGTCTTGAGC GTGGATCGGTACGGCCCTCCGAAAAAGCACCCCGTCTTGAGCTGTCGAGA CGCCGGGCATACTTGTTGATGGAAAAGCTGGGAGGATACGTACGTAGAGA GGAAGATATGTCAAGGGTGGCCGCAGTTTTCTGATTGGTTGGTTAATTGT TGAGATAGGATTTCTGATTGGTGGAGATTTCCCGGTGGATTGTTGATGTC ATCCGGGGCGGTGACGTCACTTTTCGGGGCAATGAAAAAGCACACGAGTA CCTTGCTGGCCGTGGATGGATGCTGACGTCGGTCACCTCCCCCCCCCCCC TTATACTTTTTTTTTTAGAGATCGATGATTTAGGGTTGGATCGTGTGGGG GAAATTCGTTAATTCTGGGTACGGAGTAATAAAGTGTGCTTCGAAGAGAA CCGGTGCTGTCTATCCCCCAAATTTCAGGTGTCTGCCAAGGGATGCGAAG GTTTACAGATATTTTAAATATGCTTACATTCTGCGTGCGCCGTCAGGTTG TTCGACCACATCTTGAACCGTACCATCCATACCTTTCTTCTCCTTGGGTC TCTCCTCGGTTACGCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig624:157094..162360+

>mRNA_P-littoralis_Contig624.35.1 ID=mRNA_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=669bp|location=Sequence derived from alignment at P-littoralis_Contig624:157094..162360+ (Pylaiella littoralis U1_48)
ATGGACGGGCTCCAGGAGGTAGACGCGGAGTATGAGGAGCGGATGCGAAC
GTTCGAGAGTGACTGCAACGACGGCAAGGGCAACGCGGTGGCGTGCCACC
AGGTGGGCGAGTTCCTCTCCGTGGTGAAGAACGACTTCGCCAAGGCCGGA
AAGATCTTCCAGATGAACTGCAACAGCAGAGATCACGCGCCGTCCTGTTT
TAACCTCGGCCGTGTCTTGCTTGCCGGTAAAGGTCTGCCCCAGTCGGACT
CCGAAGCCGAGAAAGTTTTCGAGTCGGCCTGCGGGAAAGATCACCAGCCG
GCATGTCTGCACCTCGGCTTCATGCACCTCTACGGTGGAGAGGGGTTCAA
GGCGGATATCAACAAAGCGATCAAGGTTCTCGACACATCTTGCAGCGGAG
GCCTGGCGGACTCTTGCAATATGCTGGCGAAGCAGCTCCTCCGGAAAGAT
GGGAAAGGGCCGACCCCAAGGGACCCTCCAAGGGCAAAGGCGTTGCTCGA
GAAGGGGTGCTCGCACAACCACGGGCCGTCGTGCTACAACCTGACGGTGA
TGCTCAAGAAGGGCGACGAGGGGGTTCCCAGCGACTACCAGAAGTACAGA
GAGCTCAGAGATAAGACAGAGGGCCTCGCGGCGCAACTTCAAGGCATCGA
CGGCAACAAACAGGCGTAG
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