mRNA_P-littoralis_Contig624.35.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: D7FQ53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ53_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 1.040e-134 Identity = 190/222 (85.59%), Postives = 204/222 (91.89%), Query Frame = 2
Query: 212 MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
MDG QEVDAEYE+RMRTFESDCNDGKGNAVACHQVGE+LSVVKNDF KAG+IF+ NCN+R+HAPSCFNLGR LLAGKGLPQSD++AEKVF+SACGKD LGFMHLYGGEGFK DI KAI+VLDTSCSGGLADSCNMLAKQLLR DGKGP PRDPPRA+ LLEKGCSHNHGPSC+NLTVMLKKGDEGVPSDY+KYRE R+KTE LAAQLQGIDGNKQA
Sbjct: 1 MDGFQEVDAEYEDRMRTFESDCNDGKGNAVACHQVGEYLSVVKNDFDKAGRIFEANCNTRNHAPSCFNLGRFLLAGKGLPQSDAQAEKVFDSACGKDHQPACLHLGFMHLYGGEGFKRDIKKAIEVLDTSCSGGLADSCNMLAKQLLRHDGKGPVPRDPPRARGLLEKGCSHNHGPSCFNLTVMLKKGDEGVPSDYKKYREYREKTESLAAQLQGIDGNKQA 222
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: W7TNA5_9STRA (Hcp beta-lactamase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA5_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.070e-43 Identity = 90/229 (39.30%), Postives = 122/229 (53.28%), Query Frame = 2
Query: 212 MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEG---FKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYN------LTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
++GLQ +D EYEERM FE DC+ GKG+A ACH VGEFL+VVK D+ KA K++ NC H PSCFNLGR+ L G+G+PQSD+ + K F+++C +G + LYG +G D+ KA +L+ +C G+ DSC LA LLR P D L VM KKGD G+P + Q++ + + TE L Q + K
Sbjct: 2 IEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKAAKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHGMACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHLLRH-----LPEDKSHXXXXXXXXXXXXXXXXXXXXXXXXXLAVMHKKGDTGIPRNEQEFEKYKKVTEDLVEQTGALTWKK 225
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A7R9UGB8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB8_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.290e-40 Identity = 86/228 (37.72%), Postives = 122/228 (53.51%), Query Frame = 2
Query: 230 VDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCS--GGLADSCNMLAKQLLRK---------------DGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGID 862
VD EYEERM +E DC +GKG AC EF SVVK D +A IF+ NC + SCF+ R L+ GKG QSD +A + F+ +C + G + G G + D+ +A+K +++C G + ++C A QLL+ D + PR+P A+ LLE+GC HG SC+NL VM K GD+GVP+D K++E + +TE L +D
Sbjct: 63 VDKEYEERMAAYEIDCAEGKGEPYACQCAAEFFSVVKGDHPRAYTIFKRNCLENRYGASCFSTARALITGKGAEQSDEQAFEYFDKSCQLEYAPGCYHAGLLRR-AGLGTRKDVPEALKNFESACQDPGNIPEACYEKALQLLKPLEEAQSKKSSWFSWGDDRSSVPRNPEEARKLLERGCRQAHGASCFNLAVMYKNGDDGVPADAAKFQEYKKETERLIKAQGSMD 289
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A3R7G934_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G934_9STRA) HSP 1 Score: 147 bits (371), Expect = 6.660e-37 Identity = 88/223 (39.46%), Postives = 114/223 (51.12%), Query Frame = 2
Query: 209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
S +Q V+ + EER F S+CNDG G+A ACH GE+L+VV + A K++++NCN D+ SCFNLGR+ LAGKG+ Q+D EA ++FE AC + XXXX +A L P R+ AK LEK C N P+C+NL VM KKGD +P D QKY+E R KTE L Q G+ K A
Sbjct: 8 SAADVQRVNQQLEERHYEFRSNCNDGDGDASACHSWGEWLAVVDKNHKDAAKMYELNCNKNDYPASCFNLGRLRLAGKGVDQNDHEAFRLFEKACAEGHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVANMYLSPAVNSPIKRNVLEAKTYLEKACDANFAPACHNLAVMYKKGDVSIPKDEQKYQEYRAKTEKLIEQAGGMSSIKSA 229
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: F0WJI5_9STRA (Hcp betalactamaselike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJI5_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.300e-36 Identity = 80/234 (34.19%), Postives = 125/234 (53.42%), Query Frame = 2
Query: 188 AHR*RYKSMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLL------RKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
+H + +DG+ + E+R+ F+++C++GKG+ +ACH GE+L+VV+ D+ A ++++ NC +A SCFNLGR+ LAGKG+ ++D +A ++FES+C K M+L G G D+ + + L + + L K+ RDP RAK + C N P+CYNL VM K GD GV + + Y E + KTE L Q +G+ G K
Sbjct: 8 SHEPSAEEVDGVNQA---IEDRLHEFKANCDNGKGDPMACHSWGEWLTVVEKDYNSAAEVYRKNCEQNCYAASCFNLGRLTLAGKGIEENDEKALELFESSCAKKHAQACQHAALMYLEG-IGTSKDVLRGLAGLXXXXXXXXXXXXSRVGSFYLDPPKIENKEQSKKLQRDPIRAKKYYGRACDANFAPACYNLAVMFKNGDTGVDKNEELYEEYKKKTEQLVNQAKGMLGVK 237
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A662Y1C3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1C3_9STRA) HSP 1 Score: 137 bits (346), Expect = 7.820e-34 Identity = 81/227 (35.68%), Postives = 110/227 (48.46%), Query Frame = 2
Query: 206 KSMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEK---VFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
+S ++ V+ + EER F S+CNDG G+A ACH GE+L+VV ++ A ++++NC+ ++ SCFNLGR+ A +S S A + F+ AC D A+SCN +A L RD P+AK LEK C N P+C+NL VM KKGD G+P D KY E R KTE L AQ G+ K A
Sbjct: 7 RSAAEVKRVNQQLEERHYEFRSNCNDGAGDASACHSWGEWLAVVDKNYKDAAAMYELNCSKNNYPASCFNLGRLKRASIWQKRSLSTAFEGLAAFKEACEYDD-------------------------------------ANSCNRVASMYLSPPAGSAIKRDAPQAKTFLEKACDANFAPACHNLAVMYKKGDAGIPKDETKYEEYRQKTEDLIAQAGGMSSIKSA 196
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A5D6XP75_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP75_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.970e-33 Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 2
Query: 221 LQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRK-DGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRE 814
+Q V+ + E+R F S+CN G G+A ACH GE+L+VV ++A A +++Q+NC ++A SCFNLGR+ LAGKG+ +D+EA +F AC ++ K ++ +C A SCN +A L GP RDP AK LE+ C N P+C+NL VM KKGD GV +++ +
Sbjct: 12 VQRVNEQLEQRHYEFRSNCNGGDGDASACHSWGEWLAVVDKNYAGAAEMYQLNCAKNNYAASCFNLGRLKLAGKGVETNDTEAINLF-GAC-----------------------VNVLKGLEAFKEACERDDASSCNRVASMYLSTMAATGPIARDPLLAKRYLERACDANFAPACHNLAVMYKKGDSGVEQSEERFED 186
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A0P1AVW2_PLAHL (Uncharacterized conserved protein (Contains TPR repeat) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVW2_PLAHL) HSP 1 Score: 135 bits (340), Expect = 1.320e-32 Identity = 86/221 (38.91%), Postives = 111/221 (50.23%), Query Frame = 2
Query: 209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
S ++ V+ + ER F S+CNDG G+A ACH GE+++VV ++ A I+++NC+ + SCFNLGR+LLAGKGL QSD +A +F AC XXXXXXX +A L P R+ +AK LEK C N P+C+NL VM KKGD G+ D KY E R KTE L Q GI K
Sbjct: 8 SASEVKRVNQQLRERHYEFRSNCNDGDGDASACHSWGEWVAVVDKNYKDAATIYELNCSKSGYPASCFNLGRLLLAGKGLEQSDPDAFDLFGKACAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVATMYLSPASNSPIERNIQQAKTYLEKACDANFAPACHNLAVMYKKGDVGISKDQSKYEEYRAKTEKLIEQAGGISSIK 227
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A8K1FNS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNS0_PYTOL) HSP 1 Score: 131 bits (329), Expect = 4.780e-31 Identity = 79/222 (35.59%), Postives = 109/222 (49.10%), Query Frame = 2
Query: 215 DGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSCNMLAKQL---LRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNK 871
D ++ V+ + EER F S+CNDG+G+A ACH GE+L+VV ++ A ++ +NC+ ++ SCFNLGR+ LAGKG+ +D++A +FE +C XXXX L + + + P RD AK LEK C N P+C+NL VM KKGD GV KY E R KT L AQ G+ K
Sbjct: 10 DEVRRVNQQLEERHYEFRSNCNDGEGDASACHSWGEWLAVVDKNYKDAAAMYALNCDKNNYPASCFNLGRLKLAGKGVEMNDTDAIDLFEKSCKGGHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGAMSAESRNPIKRDAVMAKTYLEKACDANFAPACHNLAVMFKKGDVGVEQSDAKYEEYRKKTNDLIAQAGGMSSVK 231
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Match: A0A024FSW8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FSW8_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.050e-30 Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 2
Query: 209 SMDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGKIFQMNCNSRDHAPSCFNLGRVLLAGKGLPQSDSEAEKVFESACGKDXXXXXXXLGFMHLYGGEGFKADINKAIKVLDTSCSGGLADSC-------------NMLAKQLLRKDGKGPTPRDPPRAKALLEKGCSHNHGPSCYNLTVMLKKGDEGVPSDYQKYRELRDKTEGLAAQLQGIDGNKQA 877
S + + V+ E E+R F ++C+DG+G+ +ACH GE+L+VV+ D+ A +++ NC + +A SCFNLGR++LAGKG+ ++D +A ++FE +C K XXXXXX N +LL+ RDP RAK K C N P+CYNL VM K GD GV + + Y E + KTE L Q +G+ G K A
Sbjct: 12 SAEEVDHVNQEIEDREHEFRANCDDGEGDPMACHSWGEWLTVVEKDYTSAANVYRKNCEEKCYAASCFNLGRLMLAGKGVEENDEKALELFERSCAKKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPPAMENGEQSELLQ--------RDPIRAKKYYAKACDANFAPACYNLAVMFKNGDTGVEKNEKMYEEYKKKTEQLVKQAKGMLGVKVA 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig624.35.1 >prot_P-littoralis_Contig624.35.1 ID=prot_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp MDGLQEVDAEYEERMRTFESDCNDGKGNAVACHQVGEFLSVVKNDFAKAGback to top mRNA from alignment at P-littoralis_Contig624:157094..162360+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig624.35.1 ID=mRNA_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5267bp|location=Sequence derived from alignment at P-littoralis_Contig624:157094..162360+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig624:157094..162360+ >mRNA_P-littoralis_Contig624.35.1 ID=mRNA_P-littoralis_Contig624.35.1|Name=mRNA_P-littoralis_Contig624.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=669bp|location=Sequence derived from alignment at P-littoralis_Contig624:157094..162360+ (Pylaiella littoralis U1_48)back to top |