mRNA_P-littoralis_Contig624.22.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: D7FQ29_ECTSI (Kinesin motor protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ29_ECTSI) HSP 1 Score: 843 bits (2179), Expect = 7.000e-278 Identity = 524/868 (60.37%), Postives = 599/868 (69.01%), Query Frame = 1
Query: 1864 TLVATPVAASGLSHKMDDPLVYNFDDSWLVAEGLPVVTGLAAGGGDAVYLSFRGARHDGVVTAIGSLSTNKRRRPLLVDTRREGFRDRVGSWKGARASPMEGASPSGRN-HVNARERNGSRSARSGGNFVRIASGFASALAVDDEMNLFYVTAENRGTCRALWCSVLGAGNRRVSSLREHSLTAHVTVAGALPTITAVVPIEGVMPVDATGQAERVPRRSVGDGEYFDSSVRHNKQGFDKRNDRHARREKAQAXXXXXXXXXXXXXXXXXXEDDDEAISVSTAGRKPLFASRHHS-ADCVQAGGWEAAARNEHNSAVVNMRDDDDEPVNIAVVARCRPLLVREMRLGMRKAVFCDGSEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPKQHIASKAPADEATTGVGGGGAEGEGAGYLDSSCVVPSLSCHIVKELKRWRGGAKSRLLSSGPSRGAHIRPWESAVPIHAPS--AAVAASISPNNKAPICQQLGS-SLLSSPP---------QGGNNGIEGD 4425
T ++T A LS + Y+ +DSWLVAEGLPV+TGL AG G A+Y+S GA HDG VT+IGSLST KR R VD RRE FR R K E AS +GR+ H A +G + S G RI+SGFA+ LAVDD+MNLFY+TAE +GTCRALWCSV GAG+RRVSS+RE+ T +T AG P A +P A G+AER S+ G+ S N A+ + AQA XXXXXXXXXX +DDEA+ S GRK LFASR S AD G + + +++ + PVNIAVV+RCRPLL REM+ G+R AVFCDG+EI+V + +PTKR RRFGFDRVFGP TSQA++Y+EAV PVV+KMLDGFNCSVLAYGQTGSGKTFTMEGGLVDP+ + K T A DD NATA E+EK GIIPRAVHTIFREGG GTRRYWVYVSHMEIYNERLFDLLAPEAA A PR G +G+ +G GL IEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSK+NRR AETMCNVESSRSHGVFCVRVISAEPTPWGGE+TRDGRLSLVDLSGSENIKRSGA+G RAKEAAAIGQSLL LGRVIKAL + APHIPYRESKLTRVLGDSLGGNAFTAIILNITP++GML+ETLNTLTYAKTAQSV+N PKQHIA+KAP ++AT G G + +L S V +LSC++V ELKRWRG KSRLLSSG SRGA+I PWES VPI APS ++ A SPN P Q+ + S+LSS P QG GI GD
Sbjct: 9 TALSTNTADETLSPRPVASPSYSTEDSWLVAEGLPVITGLVAGAGGAIYMSLCGASHDGTVTSIGSLSTRKRCRVPQVDPRREDFRSRTACEK------RERASSAGRDKHAGATWGDGVGISHSEGKLARISSGFAATLAVDDDMNLFYITAERKGTCRALWCSVPGAGSRRVSSIRENFPTVRITAAGVPPKKIADIPA-------AIGRAER----SIVSGDRGTESGGGNTG--------RAKDQTAQASAXXXXXXXXXXALSSALAEDDEAVPASGPGRKSLFASRRRSTADKEYTDGDDGSGVG---------KEESNAPVNIAVVSRCRPLLTREMKRGVRAAVFCDGNEIIVMDERLPTKRSRRFGFDRVFGPRTSQARLYSEAVCPVVRKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPN-IDVKKTAE-----ADPDDVNATA-CEVEKVGIIPRAVHTIFREGGYGGTRRYWVYVSHMEIYNERLFDLLAPEAAT-LAKASATNSSXXXXXXXXXXXXXXXXXPRSTP---GSSGSRPLQGIGLTIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKNNRRTAETMCNVESSRSHGVFCVRVISAEPTPWGGEITRDGRLSLVDLSGSENIKRSGAVGDRAKEAAAIGQSLLALGRVIKALVKHAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPNNGMLEETLNTLTYAKTAQSVRNTPKQHIANKAPTEKATIGTGD-------SSHLAPSSGVQNLSCNMVNELKRWRGDVKSRLLSSGSSRGAYISPWESQVPIDAPSHFSSTAGGRSPNMDGPSHQRRHNPSVLSSQPFADDVPSNQQGSGRGIAGD 824
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: I0YJJ3_COCSC (Kinesin-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YJJ3_COCSC) HSP 1 Score: 264 bits (674), Expect = 9.070e-75 Identity = 165/412 (40.05%), Postives = 229/412 (55.58%), Query Frame = 1
Query: 2839 VNIAVVARCRPLLVREMRLGMRKAVFCD--GSEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
VN+ V+ RCRPL E+ G + + C+ E+ VS+ + R F FD+VF P + QA++Y A+ P+V+++L+GFNC++ AYGQTG+GKT+TMEGG P + S+ + DE AG+IPRA+H IF + Y V S +E+YNE DLLA A D ++ NG V+V+GL ++ VK+ +I+A++ R RR AET+ N +SSRSH VFCV V E + G EV + G+L LVDL+GSEN+ RSGA+ ARAKEA I +SLLTLGRVI AL ++PH+PYR+SKLTR+L DSLGG T +I I P +ETL+TL YA A++++N P+
Sbjct: 9 VNVQVILRCRPLSKEEVANGTHQVITCNERAREVTVSHNVGGKQLGRSFHFDKVFDPDSGQAKLYRMAIKPIVEEVLEGFNCTIFAYGQTGTGKTYTMEGG---PRNSGEGSSGELSDE-----------------AGVIPRAIHQIFSILD-ENDAEYTVKCSFLELYNEETTDLLAVGDAVDQKL-------------------------KMLEDNG---------------------RVVVQGLEEIIVKNKVDIYALLDRGSAKRRTAETLLNKQSSRSHSVFCVTVHMREVSAEGEEVIKTGKLYLVDLAGSENVNRSGAVDARAKEAGLINKSLLTLGRVITALVEKSPHVPYRDSKLTRLLRDSLGGRTKTCVIATIAPTVQCQEETLSTLDYAHRAKNIRNRPE 353
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A7R9TV52_9VIRI (Kinesin-like protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TV52_9VIRI) HSP 1 Score: 266 bits (680), Expect = 6.530e-74 Identity = 169/416 (40.62%), Postives = 226/416 (54.33%), Query Frame = 1
Query: 2827 DDEPVNIAVVARCRPLLVREMRLGMRKAVFCDGS--EIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
D + VN+ V+ RCRP E + V C + E+ VS R F +D+VFGP + QA++Y AV P+V ++L G+ C++ AYGQTG+GKTFTMEGG+ T V D A+D AG+IPR+V IF +G+ Y V V+ +E+YNE + DLL + D R L + ED V V+GL +V VK+P+EIF ++ R RR AET N +SSRSH VF V + E TP G +V + GRL+LVDL+GSENI RSGA +RA+EA I +SLLTLGRVI AL + PH+PYR+SKLTR+L DSLGG T II + P L+ETL+TL YA A++++N P+
Sbjct: 5 DGDSVNVQVILRCRPANAEEKKARAPTVVKCAEASREVHVSQTIAGKTHERTFHYDKVFGPQSEQAELYETAVTPIVDEVLSGYTCAIFAYGQTGTGKTFTMEGGIAGAEK------TYVKDGALAAD------------AGVIPRSVKQIFETLEANGSE-YSVKVTFLELYNEEITDLLGADTLDDK--------------------------------------------RKLALLEDSKGFVTVRGLEEVIVKTPDEIFDVLNRGTVKRRTAETKLNKQSSRSHSVFSVTIHMKESTPDGEDVIKVGRLNLVDLAGSENIGRSGAKDSRAREAGEINKSLLTLGRVISALVEKQPHVPYRDSKLTRMLRDSLGGRTKTCIIATVAPSVNCLEETLSTLDYAHRAKNIKNRPE 357
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: C7J5H3_ORYSJ (Kinesin-like protein (Fragment) n=5 Tax=BOP clade TaxID=359160 RepID=C7J5H3_ORYSJ) HSP 1 Score: 258 bits (660), Expect = 1.170e-72 Identity = 164/422 (38.86%), Postives = 228/422 (54.03%), Query Frame = 1
Query: 2809 VNMRDDDDEPVNIAVVARCRPLLVREMRLGMRKAVFCDG--SEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
++ R D ++ VN+ V+ RCRP E+R + + C+ E+ V+ + R F FD+VFGP Q +Y +A+ P+V ++L+GFNC++ AYGQTG+GKT+TMEG A S + AG+IPRAV IF T Y V V+ +E+YNE + DLLAPE + A + P L + ED GV+V+GL + V + EIF+++ R RR AET+ N +SSRSH +F + + E TP G E+ + G+L+LVDL+GSENI RSGA RA+EA I +SLLTLGRVI AL H+PYR+SKLTR+L DSLGG T II ++P L+ETL+TL YA A+S++N P+
Sbjct: 13 MSSRQDKEKSVNVQVLLRCRPFSDDEVRSNAPQVITCNDYQREVAVTQTIAGKQIDRVFTFDKVFGPTAKQRDLYDQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGEC----------------RRAKSGPKGQLPAD----AGVIPRAVKQIFDTLESQNTE-YSVKVTFLELYNEEITDLLAPEEISKAA-------------LEERQKKP------------------------LPLMEDGKGGVLVRGLEEEIVTNASEIFSLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVITALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPSVHCLEETLSTLDYAHRAKSIKNRPE 376
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A833XYB9_JUGRE (Kinesin-like protein n=2 Tax=rosids TaxID=71275 RepID=A0A833XYB9_JUGRE) HSP 1 Score: 258 bits (659), Expect = 1.630e-72 Identity = 166/419 (39.62%), Postives = 226/419 (53.94%), Query Frame = 1
Query: 2818 RDDDDEPVNIAVVARCRPLLVREMRLGMRKAVFCD--GSEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
R + ++ VN+ V+ RCRP E+R + + C+ E+ VS R F FD+VFGP Q +Y +AV P+V ++L+GFNC++ AYGQTG+GKT+TMEG S N E AG+I RAV IF G Y V V+ +E+YNE + DLLAPE + R+A+ + + L + ED GV+V+GL + V S EIF ++ R RR AET+ N +SSRSH +F + + E TP G E+ + G+L+LVDL+GSENI RSGA RA+EA I +SLLTLGRVI AL HIPYR+SKLTR+L DSLGG T II ++P L+ETL+TL YA A++++N P+
Sbjct: 4 RHEKEKGVNVQVLLRCRPFSDEELRSNAPQVITCNEYSREVSVSQNIAGKHLDRVFTFDKVFGPSAQQKDLYEQAVIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKS-----------------GPNGELPPE---AGVITRAVKQIFDTLEGQNAE-YSVKVTFLELYNEEITDLLAPEELS-----------------------------RVASED--------KTKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPE 364
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A4W3JKM8_CALMI (Kinesin-like protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JKM8_CALMI) HSP 1 Score: 266 bits (679), Expect = 2.880e-72 Identity = 173/432 (40.05%), Postives = 233/432 (53.94%), Query Frame = 1
Query: 2827 DDEPVNIAVVARCRPLLVREMRLGMRKAVFCDG--SEIVV-SNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK--QHIASKAPADEAT 4107
+++ NI VV RCRP V E + + C+ E+ V ++G K +++ FD VFGP Q VY VYP++ +++ G+NC++ AYGQTGSGKTFTMEG S +E T E AG+IPR +H IF + GT + V VS +EIYNE LFDLL+P +P R R+ R GV++KGL ++ V + +E++ I+ R RR A T+ N SSRSH VF + + E T G E+ + G+L+LVDL+GSENI RSGA+ RA+EA I QSLLTLGRVI AL R PH+PYRESKLTR+L DSLGG T+II I+P S ++ETL+TL YA A+++ N P+ Q + KA E T
Sbjct: 12 EEKGKNIQVVVRCRPFNVSERKANSHNVIDCESVKKEVAVRTSGPGSEKGAKKYTFDMVFGPSAKQIDVYRSVVYPILDEVIMGYNCTIFAYGQTGSGKTFTMEG--------------------ERSQNEQYTW-EEDPLAGVIPRTLHQIFEKLAAQGTE-FSVKVSLLEIYNEELFDLLSP----------------SPDVSERLQMFDDPRNKR---------------------------GVIIKGLEEISVHNKDEVYQILERGAAKRRTAATLMNAYSSRSHSVFSITIHMKETTLDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTKTSIIATISPASINVEETLSTLDYACRAKNIMNKPEVNQKLTKKALIKEYT 378
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A5N5M103_9ROSI (Kinesin-like protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5M103_9ROSI) HSP 1 Score: 261 bits (667), Expect = 3.280e-72 Identity = 170/419 (40.57%), Postives = 227/419 (54.18%), Query Frame = 1
Query: 2818 RDDDDEPVNIAVVARCRPLLVREMRLGMRKAVFCDG--SEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
R + D+ VN+ V+ RCRP E+R + V C+ E+ VS R F FD+VFGP Q +Y +AV P+V ++L+GFNC++ AYGQTG+GKT+TMEG A N SE AG+IPRAV IF Y V V+ +E+YNE + DLLAPE + RIA+ + + L + ED GV+V+GL + V S EIF ++ R RR AET+ N +SSRSH +F + + E TP G E+ + G+L+LVDL+GSENI RSGA RA+EA I +SLLTLGRVI AL HIPYR+SKLTR+L DSLGG T II ++P L+ETL+TL YA A++++N P+
Sbjct: 4 RHEKDKGVNVQVLLRCRPFSEDELRSNAPQVVTCNDYQREVAVSQNIAGKHIDRVFTFDKVFGPLAQQKDLYEQAVVPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKR-----------------AKSGPNGELPSE---AGVIPRAVQQIFDTLESQNAE-YSVKVTFLELYNEEITDLLAPEEIS-----------------------------RIASEE--------KQKKQLPLMEDGKGGVLVRGLEEEIVASATEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYACRAKNIKNKPE 364
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A8J9WNZ7_9CHLO (Kinesin-like protein KIN-5C n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNZ7_9CHLO) HSP 1 Score: 265 bits (676), Expect = 4.680e-72 Identity = 164/412 (39.81%), Postives = 227/412 (55.10%), Query Frame = 1
Query: 2839 VNIAVVARCRPLLVREMRLGMRKAVFCD--GSEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
VN+ V+ RCRPL E+ G + + C+ E+ VS + R F FD+VF P +SQA++Y A+ P+V+++L+GFNC++ AYGQTG+GKT+TMEGG S + + E+AG+IPRA+H IF + Y V S +E+YNE DLLA A D ++ NG V+V+GL ++ VK+ +I+A++ R RR AET+ N +SSRSH VFCV V E + G EV + G+L LVDL+GSEN+ RSGA+ ARAKEA I +SLLTLGRVI AL ++PH+PYR+SKLTR+L DSLGG T +I I P +ETL+TL YA A++++N P+
Sbjct: 9 VNVQVILRCRPLSKEEVSNGTHQVITCNERAREVTVSQNVGGKQLGRSFHFDKVFDPDSSQAKLYRMAIKPIVEEVLEGFNCTIFAYGQTGTGKTYTMEGGPRGSGEGSGEELS--------------------EEAGVIPRAIHQIFSILDANDAE-YTVKCSFLELYNEETTDLLAVGDAVDQKL-------------------------KMLEDNG---------------------RVVVQGLEEIIVKNKTDIYALLDRGSAKRRTAETLLNKQSSRSHSVFCVTVHMREVSAEGEEVIKTGKLYLVDLAGSENVNRSGAVDARAKEAGLINKSLLTLGRVITALVEKSPHVPYRDSKLTRLLRDSLGGRTKTCVIATIAPTVQCQEETLSTLDYAHRAKNIRNRPE 353
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A540K5J4_MALBA (Kinesin-like protein n=2 Tax=rosids TaxID=71275 RepID=A0A540K5J4_MALBA) HSP 1 Score: 258 bits (658), Expect = 6.260e-72 Identity = 165/429 (38.46%), Postives = 224/429 (52.21%), Query Frame = 1
Query: 2818 RDDDDEPVNIAVVARCRPLLVREMRLGMRKAVFCDG--SEIVVSNGAVPTKRPRRFGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEG----------GLVDPSSVSTKSTTTVVDETAASDDENATATSEIEKAGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
R + ++ VN+ V+ RCRP E+R + + C+ E+ VS R F FD+VFGP Q +Y +AV P+V ++L+GFNC++ AYGQTG+GKT+TMEG G + P AG+IPRAV IF G Y V V+ +E+YNE + DLLAPE + A + + L + ED GV+V+GL + V S EIF ++ R RR AET+ N +SSRSH +F + + E TP G E+ + G+L+LVDL+GSENI RSGA RA+EA I +SLLTLGRVI AL HIPYR+SKLTR+L DSLGG T II ++P L+ETL+TL YA A++++N P+
Sbjct: 4 RHEKEKGVNVQVLLRCRPFSEDELRSNAPQVITCNEYQREVAVSQNIAGKHIDRVFTFDKVFGPNAEQRDLYEQAVIPIVHEVLEGFNCTIFAYGQTGTGKTYTMEGECKRAKTGPNGELPPG------------------------------AGVIPRAVQQIFDTLEGQNAE-YSVKVTFLELYNEEITDLLAPEELSR-------------------------------------ASLEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPE 364
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Match: A0A8C3ASG9_CYCLU (Kinesin-like protein n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3ASG9_CYCLU) HSP 1 Score: 262 bits (670), Expect = 7.010e-72 Identity = 171/418 (40.91%), Postives = 227/418 (54.31%), Query Frame = 1
Query: 2827 DDEPVNIAVVARCRPLLVREMRLGMRKAVFCDGS--EIVVSNGAVPTKRPRR-FGFDRVFGPGTSQAQVYAEAVYPVVQKMLDGFNCSVLAYGQTGSGKTFTMEGGLVDPSSVSTKSTTTVVDETAASDDENATATSEIEK-AGIIPRAVHTIFREGGGDGTRRYWVYVSHMEIYNERLFDLLAPEAAADTAXXXXXXXXPAPSPFRRSHRSPTHRSPRIATVNGGGAGANCSKGRGLIIEEDRHLGVMVKGLTQVEVKSPEEIFAIIARSKHNRRKAETMCNVESSRSHGVFCVRVISAEPTPWGGEVTRDGRLSLVDLSGSENIKRSGAIGARAKEAAAIGQSLLTLGRVIKALSRRAPHIPYRESKLTRVLGDSLGGNAFTAIILNITPHSGMLDETLNTLTYAKTAQSVQNNPK 4068
D++ NI VV RCRP E R + CD + E++V G + K R+ + FD VFGP Q VY VYP++ +++ G+NC+V AYGQTG+GKTFTMEG N T E + AGIIPR +H IF + +GT + V VS +EIYNE LFDLL+P + D P R+ R GV+VKGL ++ V + +E++ I+ R RR A T+ N SSRSH VF V + E T G E+ + G+L+LVDL+GSENI RSGA+ RA+EA I QSLLTLGRVI AL + PH+PYRESKLTR+L DSLGG T+II ++P S ++ETL+TL YA A+++ N P+
Sbjct: 12 DEKGRNIQVVVRCRPFNTME-RKSSYGVMDCDPNRKEVIVKTGGMNDKAARKTYTFDMVFGPAAKQIDVYKSVVYPILDEVIMGYNCTVFAYGQTGTGKTFTMEG----------------------ERSPNGEFTWEEDPLAGIIPRTLHQIFEKLSENGTE-FSVKVSLLEIYNEELFDLLSP--SDDVTERLQLFDDP------RNKR-----------------------------------GVVVKGLEEITVHNKDEVYQILERGSAKRRTASTLMNAYSSRSHSVFSVTIHMKEITMDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVEKRPHVPYRESKLTRILQDSLGGRTKTSIIATVSPSSSNMEETLSTLEYASRAKNIMNKPE 362 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig624.22.1 >prot_P-littoralis_Contig624.22.1 ID=prot_P-littoralis_Contig624.22.1|Name=mRNA_P-littoralis_Contig624.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2109bp MTLKSPSFLHRSFQHELLLEPCGFNNIAVVQVPEGYGATRTGAINGTASQback to top mRNA from alignment at P-littoralis_Contig624:115550..124740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig624.22.1 ID=mRNA_P-littoralis_Contig624.22.1|Name=mRNA_P-littoralis_Contig624.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9191bp|location=Sequence derived from alignment at P-littoralis_Contig624:115550..124740+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig624:115550..124740+ >mRNA_P-littoralis_Contig624.22.1 ID=mRNA_P-littoralis_Contig624.22.1|Name=mRNA_P-littoralis_Contig624.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=6327bp|location=Sequence derived from alignment at P-littoralis_Contig624:115550..124740+ (Pylaiella littoralis U1_48)back to top |