mRNA_P-littoralis_Contig624.16.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A6H5JCB9_9PHAE (ENTH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCB9_9PHAE) HSP 1 Score: 464 bits (1195), Expect = 7.870e-146 Identity = 245/318 (77.04%), Postives = 271/318 (85.22%), Query Frame = 3
Query: 804 MSMSSMRSRLNKARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGELMDALTML---GEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRWYAWLHKTREPVEALISRANKMVSRHKVVFDLPPLTATPLVLQLRNEEISLETQA 1748
MSMSSMR RLN+ARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPT EMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYI+HRFA DGS+EHASNLKESVAVLRTHHDSRRK VNYFDMDTICDVKAP WSGEDVAPMAEFL+GYADFVLRRTTQFGP F EL+DA TML GE++ V LVS G +C L EEQEGAI VAA +QVA D+R+++EVCAAQL YL E ARS Y AEV+ WYA+L++ + PVEALI RAN++ RHK+V + PL ATPLVL+LR+EE++LE QA
Sbjct: 234 MSMSSMRDRLNRARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSIEHASNLKESVAVLRTHHDSRRK-------VNYFDMDTICDVKAPSWSGEDVAPMAEFLQGYADFVLRRTTQFGPGFAELLDAFTMLLGGGEVMTAVAGLVSVGSKCCHLHEEQEGAIAVAAVVQVAHDIRDLVEVCAAQLDYLAREWDARSTYRAEVEDWYAFLYENQRPVEALIDRANELAERHKLVA-VRPLAATPLVLKLRDEEVALEEQA 543
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A6S8JKL4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8JKL4_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.700e-30 Identity = 101/322 (31.37%), Postives = 162/322 (50.31%), Query Frame = 3
Query: 852 ASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL--------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRWYAWLHKTREPVEALISRANKMVSRHKVVFD-----LPPLTATPLVLQLRNEEISLETQAAQEA 1760
+S+ YR+ K L SSE+E V+LKAT+PDD P K KH+E L+ T ++ +++Y V+RKLW KM +K+WR + KALY++HRF+ DG+ EHA++LK + LR D +RK + +F+ + A P E++ A F+ YA +VL R F F E+ + + + E L L+ AGL C L++ +E T A +VA D+ + A L ++ + PA V +W + E L+ + MV + D LP T + +L ++ ++L+T+A E+
Sbjct: 95 SSNIYRDLKGLTSSELEQVMLKATKPDDTPAKGKHVERLVGVTYQISPRYDIYDAVLRKLWGKMCEKDWRTTMKALYVLHRFSADGAPEHAASLKARLRELRRTKDPKRKDK-------FFNSKQLLAGDAKP---ENIKFRA-FMSRYAHYVLLRAQCFSGMFEEISSEPKVDKKKPPKPITSTALRTEHLEAASMLLKAGLAC-QLKDGEECENTAIAVERVASDLIGLTSAVAMALNRALKDVDLKGGDPALVKKWCEFYS------EQLLPQTKSMVKKTSSRLDAYGLFLPSRMGTSVSRELLSKGLNLDTEAGMES 398
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A448ZTH1_9STRA (ENTH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.900e-30 Identity = 97/288 (33.68%), Postives = 140/288 (48.61%), Query Frame = 3
Query: 864 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL-----------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRWYAWLHKTREPVEALISRANKMVSRHKVVFD 1676
YRE K L SSE+E V+LKATRPDD PVK KH E L+ T ++ +++Y V+RKLW+KMA+K+WR + KALYI+HRF+ DGS EHA LK V LR D +RK + S + DT E+ A FL YA +VL R FG F E+ + + ++ + L + L+ GL C L++ +E T A +VA D+ + L + + A P + +W + E+L+ + MV + D
Sbjct: 220 YREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVTYQISARYDIYDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPEHAPALKARVRELRRTRDPKRKGKFFSSKL-LLAGDT----------SEETAKYRAFLGRYAHYVLLRAQCFGGMFDEIAAPSAKDTKKKKAAPKPITSTSLKADHLDAAKLLLETGLACV-LKKGEENENTALAVERVASDLLGLTTAVTGALTRALKDDDLKGADPVLIKKWCEFYS------ESLLPQTRSMVKKTAPTLD 489
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A7S2LGQ7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGQ7_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.130e-29 Identity = 86/260 (33.08%), Postives = 137/260 (52.69%), Query Frame = 3
Query: 816 SMRSRLNKARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL-----------------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQL 1526
S S + A++R RE K ++SSE+E V+LK+TRPDD PVK KH+E L+ T ++P ++Y P++RKLWSKMA+ +WRV+ KALY++HRF+TDG +HAS LK ++ LR D +RK + +F+ + + +++ F+ YA +VL R FG F E+ + ++ + E L + ++ AG C L+ E++ IT + +VA D+ + A L
Sbjct: 225 STASAMAAAKERTGKYVREVKGMLSSELEQVLLKSTRPDDTPVKAKHMERLIGITYQLPGHLDLYDPILRKLWSKMAEPDWRVTCKALYVLHRFSTDGGPDHASQLKANLRTLRRTKDPKRKEGK------FFNSRQLLAGS----TNDEIQKYRAFMARYAHYVLLRVQCFGGNFVEIAPRQTDAKSGASSKKKSRKPEKPITSVALRSEHLDAAKMILKAGCACA-LKNEEDNEITASCAERVAIDMNGLTTAVAVAL 473
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A7S3XNF0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNF0_HETAK) HSP 1 Score: 124 bits (312), Expect = 5.470e-29 Identity = 72/175 (41.14%), Postives = 103/175 (58.86%), Query Frame = 3
Query: 828 RLNKARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL 1352
RL +A +A RE K L+SSE+E V+LKATRP DLPVK KHL+AL+ + P+EF+VY PV++KLW+K + +WR + KA +++H FA G HA++LK L + ++ + NYFD + + A G +VA A+F R Y ++ L R F P F EL
Sbjct: 2 RLRALADQARAAARELKGLVSSELEAVLLKATRPTDLPVKDKHLDALLFCCSSTPQEFDVYTPVLKKLWAKANEGDWRSAVKAAFVIHSFARRGPGHHAAHLKSLPRTLSGQYCAKLRG-------NYFDAERLAF--AGEEEGGEVAAYAKFARRYVEYALARARLFAPGFPEL 167
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A1Z5K193_FISSO (ENTH domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K193_FISSO) HSP 1 Score: 134 bits (336), Expect = 7.720e-29 Identity = 93/270 (34.44%), Postives = 140/270 (51.85%), Query Frame = 3
Query: 864 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL--------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRWYAWLHKTREPVEALI 1631
YRE K L SSE+E V+LKAT+PDD PVK KH+E L+ T ++ +F++Y V+RKLW KM +++WR + KA+YI+HRF+ DG+ EHA+ LK + LR D +RK + +F+ + P E+V A FL Y+ +VL RT +G F E+ + + + E L L+ AGL C L++ +E T A +V D+ + A L + + A PA + +W A+ K P L+
Sbjct: 218 YREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDIYDAVLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDK-------FFNTKQLLAGDTTP---ENVKFRA-FLSRYSHYVLLRTQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLAC-QLKDGEECENTALAVERVVADMIGLCSAVAVALNRALKDDDLKGADPAILKKWCAFYSKELLPQTKLM 475
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: B7G2T5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T5_PHATC) HSP 1 Score: 132 bits (331), Expect = 3.840e-28 Identity = 89/255 (34.90%), Postives = 133/255 (52.16%), Query Frame = 3
Query: 864 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL--------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRW 1586
YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+RKLW KMA+K+WR + K+LYI+HRF+ DG+ EHA+ LK + LR D +RK + YF+ + ++ P E++ A F+ YA +VL R FG F E+ + ++ E L L+ AG+ C L+E++ T A +VA D+ + A L + P + +W
Sbjct: 246 YREVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDIYDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDK-------YFNSKQLLAGESNP---ENIKFRA-FMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVAC-QLKEDEACENTAIAAERVASDLIGLTTSVAIALNRALKSSDLKGGDPELLKKW 488
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A7R9ZH59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZH59_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.730e-28 Identity = 70/163 (42.94%), Postives = 98/163 (60.12%), Query Frame = 3
Query: 864 YREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL 1352
YRE K L SSE+E V+LKAT+P+D PVK KH+E L+ T ++ +++Y V+RKLWSKMA+K+WR KALY++HRF+ DG+ +H + LK + LR D +RK + YF+ + A P + A FL YA +VL R FG F E+
Sbjct: 75 YREVKGLTSSELEQVMLKATQPNDAPVKGKHVERLVGVTYQISGRYDIYDAVLRKLWSKMAEKDWRTKIKALYVLHRFSADGAPDHQAALKARLRELRRTRDPKRKEK-------YFNSKQLLGGDASP----ENAKYRAFLARYAHYVLLRAQCFGGMFNEI 226
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A7S4VB79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.580e-28 Identity = 99/310 (31.94%), Postives = 154/310 (49.68%), Query Frame = 3
Query: 813 SSMRSRLNKARQRASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGELMD---------------------ALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYP-AEVDRWYAWLHKTREPVEALISRANKMVSRHKVVFD 1676
SS+ + +K+ + +S YRE K L SSE+E V+LKATRPDD PVK KH+E L+ T ++ +++Y V+RKLW+KMA+K+WR + KALYI+HRF++DG +H + LK + LR D +RK + YF+ + + A P + P F+ YA +VL R FG F E+ + + ++ E L + L+ AG C L++ +E T A +VA D+ + A L +++ A + RW + E L+ + KMV + D
Sbjct: 261 SSITAVKDKSTKISSGIYREIKGLTSSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDAVLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELRRTRDPKRKEK-------YFNSKQLLEGDATP----ENQPFRAFMARYAHYVLLRAQCFGGMFTEIKENPSAPPSSKKPSAAAAQKPITSTSLRPEHLEASQLLLKAGCACA-LKDGEECESTALALERVASDLIGLNTAVAIALNRALRGRESKGPVDQALIKRWCEFYS------EELLPKTKKMVKKTSAKLD 552
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV) HSP 1 Score: 128 bits (321), Expect = 1.150e-27 Identity = 89/289 (30.80%), Postives = 144/289 (49.83%), Query Frame = 3
Query: 852 ASSAYREAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTTEMPKEFNVYLPVVRKLWSKMADKEWRVSAKALYIVHRFATDGSLEHASNLKESVAVLRTHHDSRRKARRKSGLVNYFDMDTICDVKAPPWSGEDVAPMAEFLRGYADFVLRRTTQFGPAFGEL------------------MDALTMLGEMLAPVEELVSAGLQCFDLREEQEGAITVAATLQVARDVRNVMEVCAAQLYYLTTELQARSAYPAEVDRWYAWLHKTREP-VEALISRANKMVSRH 1661
+S+ YR+ K L SSE+E V+LKAT+PDD PVK KH+E L+ T ++ +++Y V+RK+W+KM +K+WR KALY++HRF++DG+ +H + LK + LR D +RK + YF+ + A P D F+ YA +VL R FG F E+ + + + E L + ++ AG C L++ +E T +VA D+ + A+ L A A PA + RW + P +A++ +A+ + +
Sbjct: 92 SSNIYRDIKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQISGRYDIYDAVLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELRRTRDPKRKEK-------YFNSKQLLAGDASP----DNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACA-LKDGEECENTCFCVERVASDLIGLTGAVASGLNRALKGKGAEGADPAVIKRWCEFYSDELLPKTKAMVKKASPQLDAY 368 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.16.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig624.16.6 >prot_P-littoralis_Contig624.16.6 ID=prot_P-littoralis_Contig624.16.6|Name=mRNA_P-littoralis_Contig624.16.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=844bp MAFSTSKGRSDRLLSVCTAASRGGSESREGSSNRGRRGQVPTSARPVPTVback to top mRNA from alignment at P-littoralis_Contig624:88897..98004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig624.16.6 ID=mRNA_P-littoralis_Contig624.16.6|Name=mRNA_P-littoralis_Contig624.16.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=9108bp|location=Sequence derived from alignment at P-littoralis_Contig624:88897..98004+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig624:88897..98004+ >mRNA_P-littoralis_Contig624.16.6 ID=mRNA_P-littoralis_Contig624.16.6|Name=mRNA_P-littoralis_Contig624.16.6|organism=Pylaiella littoralis U1_48|type=CDS|length=2532bp|location=Sequence derived from alignment at P-littoralis_Contig624:88897..98004+ (Pylaiella littoralis U1_48)back to top |