prot_P-littoralis_Contig624.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig624.12.1
Unique Nameprot_P-littoralis_Contig624.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length960
Homology
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: A0A6H5JE11_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE11_9PHAE)

HSP 1 Score: 455 bits (1171), Expect = 2.820e-143
Identity = 395/878 (44.99%), Postives = 448/878 (51.03%), Query Frame = 0
Query:  100 MPSIRPLVPPARGLGLESSTPRTLSAAVDLSGVARRAVPSSPSTPL-GARFADT----QPVGNVSVSRALSSSQQEHPLTSCPLVAPSRQADSGGRSNGGRASTRRLAGGGGDSRRAPAVTNITAERRPARDRTALRAVSARLDAAATAIDAVEIGVRSAADSLDSLLQLLESRQESAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVTTERLSSGFAAXPXLAATERDVLPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQRHNEERVNADERNCR----RANFATRYRADGSLEDLVANRDALLRGVNDELSSRSLRSAGNSLIVLSTPRPTPSSTGQGTARELLLGSTPPASQRHNEERVNAHERNCRRANFATRHGADGSLEYLVANRDALLRGVSNELSSPSLRSAGNSLIVLSTPRPAPSSTGQGTAEEAASGRSVEEQASRERHDVGRLTSSRA-----ADRGIE-TVEPEVTGPATVSRLNSPSILSTDARPHSRQTSESSRPSPRGMRASGSSSTLPVSNMEVAANPGRGLQQEMIELAMESIDEERGRLMLEIARLRGQQHQSLAHLRRLQREQLVVRQRQVSTLSAIVNSFGRTVEAASALPHGDNSSLGRISSDVVSTLRRMLRLLSATVPVVAPAGRSAGQLLASSPLSTTTATRPDGALPTPTSAQHPRSAARGRSAGDGPTGTYSVGGRVALRPTGVDLTQEVIDAALQALPRLAAAATVISDARRMQGYVAGLAGGAP------GAPEERRCCSTETIAALPDAPSCAAGVVEGDGGGGDDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVPNIEAGSTATTT 956
            M S RP+VP ARGL L+S  PRTLSA         RA  SS  TPL GA  ADT     P  +          +Q HP T+ PL  P+R     GRS+GGRAS RRLAGGG D+ R   V      R   RD TALRAVSARLDAA+TAIDAVEIGVRSA+DSLDSLLQLLESR   AV                                          +G      SS        AA   D    A                            AS   +      DE N      +     RY          ANRD                    + IV   P       G G +R  ++      +         A E  CR      R    G+ E  VA  D  +   +NE  S   RS  +    L+ PRP  S   Q   EE  S R   E+ + E H VG   S+ A     AD GI  T+E   T  A +  L S    S ++ P S + + S R SPRGM  +GS +             GRG     +   +  ID ERGRL+LEIARLRGQQ+QSL HL RLQ EQ VVRQRQVSTLS IVNSFGRTV AA+ALPHG++SSLGRISSDVVSTLRRMLRLLSATVP    A  + G     SP+ TTT++  DG  P   +   P +   G+ A  G  GTYSVGGRVALRP GVDLTQEVIDAALQALPRLAAAAT IS A RMQGY+A LAGG        G+    RCCS ETIAALPDA     G V G+  GGD  +RGCVICLSE     Q LCRLPCNHVFHRVCVGKWL MQDSCPTCRRQVPN+E GST  TT
Sbjct:    1 MSSTRPVVPTARGLELQSLIPRTLSA---------RASTSSLFTPLPGAGLADTPRSRSPPSSXXXXXXXQQDRQNHP-TAYPLRVPNRH----GRSDGGRASIRRLAGGGRDAWRTAPVAYSAVVRGTGRDTTALRAVSARLDAASTAIDAVEIGVRSASDSLDSLLQLLESRHGPAVSQTSLSSTSAEVDAFE--------------------------NGSADPGPSSRGIGEGGRAAASSDSQASAGAMSMRSPRSSVSPPAVSLPTSSGLMVGASSSESPR----DEFNVSTPPPQPMGPPRY----------ANRDG-------------------APIVARVPE------GGGGSRAAIMLRREQQAGLTAFSNPEAGEHLCRSPAVLPRQDG-GAQEGSVATGDTSI-DETNEEHSTRTRSGQHLTSALALPRPVSSPAVQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIGIGGTMEAAPTDLAALRMLGSDRTTSLNSVPRSVREAGSRRASPRGMEGTGSGAASSTRETYAGETSGRGNVALPVR-ELNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAAALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQLAPGN----SPVLTTTSSVSDGTPPPAPNTPRPTAVREGQVA-SGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGTSDTVGRGSDYTGRCCSKETIAALPDASQPVEGAV-GEVDGGD--VRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATT 788          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: D7FQ33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ33_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 1.870e-125
Identity = 273/481 (56.76%), Postives = 304/481 (63.20%), Query Frame = 0
Query:  492 GSLEYLVANRDALLRGVSNELSSPSLRSAGNSLIVLSTPRPAPSSTGQGTAEEAASGRSVEEQASRERHDVGRLTSSRA-----ADRGIE-TVEPEVTGPATVSRLNSPSILSTDARPHSRQTSESSRPSPRGMRASGSSSTLPVSNMEVAANPGRG---LQQEMIELAMESIDEERGRLMLEIARLRGQQHQSLAHLRRLQREQLVVRQRQVSTLSAIVNSFGRTVEAASALPHGDNSSLGRISSDVVSTLRRMLRLLSATVPVVAPAGRSAGQLLASSPLSTTTATRPDGALPTPTSAQHPRSAARGRSAGDGPTGTYSVGGRVALRPTGVDLTQEVIDAALQALPRLAAAATVISDARRMQGYVAGLAGGAPGAPEERR------CCSTETIAALPDAPSCAAGVV-EGDGGGGDDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVPNIEAGSTATTT 956
            G+ E  VA  DA +   +NE  S   RS  +    L+ PRP  S   Q   EE  S R   E+ + E H VG   S+ A     AD  I  T+E   T  A +  L S    S D+ P   + + S R SPRGM  +GS +             GRG   L    +E AM  ID ERGRL+LEIARLRGQQ+QSL HL RLQ EQ VVRQRQVSTLS IVNSFGRTV AA ALPHG++SSLGRISSDVVSTLRRMLRLLSATVP    A  + G     SP+ TTT++ PDGA P   +A  P +   G++A  G  GTYSVGGRVALRP GVDLTQEVIDAALQALPRLAAAAT IS A RMQGY+A LAGG       RR      CCS ETIAALPDA     G V E DGGG    +RGCVICLSE     Q LCRLPCNHVFHRVCVGKWL MQDSCPTCRRQVPN+E GST  TT
Sbjct:   86 GAQESSVATGDASI-DETNEEHSTRTRSGQHLTSALALPRPVSSPAAQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIDIGGTMEAAPTDLAALRTLGSDRTPSLDSGPRLVREAGSRRASPRGMEGTGSGAASSTREANAGETSGRGDMALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAPGN----SPVLTTTSSVPDGAPPPAPNAPRPAAVREGQAA-SGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGEASDTAGRRSDYTGRCCSKETIAALPDASQPVEGAVGEVDGGG----VRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATT 556          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: UPI001EEB320E (E3 ubiquitin-protein ligase MPSR1-like isoform X2 n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEB320E)

HSP 1 Score: 61.6 bits (148), Expect = 2.120e-8
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  899 CVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQV 944
            CVIC  E  +T     RLPCNH FH  C+GKWL +Q +CPTCR+ V
Sbjct:   15 CVICFEE-FITEYGCKRLPCNHKFHSQCIGKWLLVQKTCPTCRKNV 59          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: A0A7N0T830_KALFE (RING-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T830_KALFE)

HSP 1 Score: 62.0 bits (149), Expect = 2.260e-8
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  899 CVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVP 945
            C IC+ E  V  +L  R+PC HVFH +C+ KWLR+  SCPTCR  +P
Sbjct:   27 CAICMEEDQV--RLNSRMPCRHVFHTMCIEKWLRISSSCPTCRFAMP 71          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: A0A830CTD3_9LAMI (E3 ubiquitin-protein ligase sgr9 amyloplastic n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CTD3_9LAMI)

HSP 1 Score: 66.2 bits (160), Expect = 5.120e-8
Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  849 VAGLAGGAPGAPEERRCCSTETIAALPDAPSCAAGVVEGDGGGGDDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVP 945
            V G   G+ G  EE    S   + ALP         VE  GGGG+     CVIC  E  V  + +C LPC H+FH VC+ +WLR  ++CP CRR++P
Sbjct:  172 VMGFGEGSKGGSEE--AASPAAVVALPS--------VEVVGGGGE-----CVICKEE-MVKGREVCELPCGHLFHWVCILRWLRKTNTCPCCRRRLP 252          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: UPI000B8D1B65 (E3 ubiquitin-protein ligase AIP2-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D1B65)

HSP 1 Score: 62.0 bits (149), Expect = 6.600e-8
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  893 DDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVPNIEAGS 951
            DDG   CVICL E     QL  R+PC+H++H +C+ KWL + ++CP+CR   P +E  S
Sbjct:   59 DDGEEQCVICLEELLYVTQLS-RMPCSHLYHSLCIAKWLTVHETCPSCR--FPILETDS 114          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: UPI001EECD42C (E3 ubiquitin protein ligase RIE1-like isoform X1 n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EECD42C)

HSP 1 Score: 61.6 bits (148), Expect = 9.490e-8
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  899 CVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQV 944
            CVIC  E  +T     RLPCNH FH  C+GKWL +Q +CPTCR+ V
Sbjct:   71 CVICFEE-FITEYGCKRLPCNHKFHSQCIGKWLLVQKTCPTCRKNV 115          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: A0A2G9HZK3_9LAMI (Anaphase-promoting complex (APC), subunit 11 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HZK3_9LAMI)

HSP 1 Score: 65.5 bits (158), Expect = 1.050e-7
Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
Query:  888 DGGGGDDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVP 945
            D GGGD   + C ICL E    A+   RLPC HVFH  C+G+WL     CP CRR++P
Sbjct:  231 DDGGGDSSEKSCSICLEEFRPRARAT-RLPCRHVFHEHCIGRWLAGNHVCPLCRRRLP 287          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: A0A2C9W1F2_MANES (RING-type domain-containing protein n=3 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W1F2_MANES)

HSP 1 Score: 64.3 bits (155), Expect = 1.140e-7
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0
Query:  890 GGGDDGLRGCVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQV 944
            G GD+    CVICL   S + + L ++ CNH+FH  C+  WL++Q+SCPTCRR++
Sbjct:  172 GDGDELSDDCVICLEGLSGSREALTKMTCNHIFHERCIFGWLKVQNSCPTCRREL 226          
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Match: UPI000B77DE7B (E3 ubiquitin-protein ligase RNF181-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77DE7B)

HSP 1 Score: 62.0 bits (149), Expect = 2.660e-7
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0
Query:  899 CVICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQV 944
            C ICL E S     L ++PC+H+FH  C+ +WL++++SCPTCRR++
Sbjct:  127 CAICLEELSGARFPLTKMPCSHIFHERCISRWLKVRNSCPTCRREL 172          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE11_9PHAE2.820e-14344.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FQ33_ECTSI1.870e-12556.76RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001EEB320E2.120e-856.52E3 ubiquitin-protein ligase MPSR1-like isoform X2 ... [more]
A0A7N0T830_KALFE2.260e-853.19RING-type domain-containing protein n=1 Tax=Kalanc... [more]
A0A830CTD3_9LAMI5.120e-841.24E3 ubiquitin-protein ligase sgr9 amyloplastic n=1 ... [more]
UPI000B8D1B656.600e-845.76E3 ubiquitin-protein ligase AIP2-like n=1 Tax=Cari... [more]
UPI001EECD42C9.490e-856.52E3 ubiquitin protein ligase RIE1-like isoform X1 n... [more]
A0A2G9HZK3_9LAMI1.050e-750.00Anaphase-promoting complex (APC), subunit 11 n=1 T... [more]
A0A2C9W1F2_MANES1.140e-747.27RING-type domain-containing protein n=3 Tax=Maniho... [more]
UPI000B77DE7B2.660e-747.83E3 ubiquitin-protein ligase RNF181-like n=1 Tax=He... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 899..940
e-value: 4.4E-7
score: 39.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 899..941
e-value: 9.9E-11
score: 41.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 899..941
score: 12.090947
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 889..949
e-value: 1.1E-14
score: 55.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 759..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 550..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..633
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 759..803
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 402..943
NoneNo IPR availablePANTHERPTHR14155:SF296RING-H2 FINGER PROTEIN ATL57coord: 402..943
NoneNo IPR availableCDDcd16448RING-H2coord: 899..941
e-value: 1.15044E-14
score: 66.7067
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 898..946

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig624contigP-littoralis_Contig624:70406..73285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig624.12.1mRNA_P-littoralis_Contig624.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig624 70361..74243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig624.12.1 ID=prot_P-littoralis_Contig624.12.1|Name=mRNA_P-littoralis_Contig624.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=960bp
MPGRLNSHRLMPGSSSTSLGNPLAERDGTSASSTTRRSTDVYTRARAEGA
RMSRSISSGGDVATPSHGTRTGTDIYSRARAEGARMCRSMSSRSQRAASM
PSIRPLVPPARGLGLESSTPRTLSAAVDLSGVARRAVPSSPSTPLGARFA
DTQPVGNVSVSRALSSSQQEHPLTSCPLVAPSRQADSGGRSNGGRASTRR
LAGGGGDSRRAPAVTNITAERRPARDRTALRAVSARLDAAATAIDAVEIG
VRSAADSLDSLLQLLESRQESAVTTPPATTSSSSRGRGSSAEEASTSASL
TTAAVVLASADGGPVSGVTTERLSSGFAASPPLAATERDVLPIAASRGGE
GGGGLRAANMLRRELLLGSTPPASQRHNEERVNADERNCRRANFATRYRA
DGSLEDLVANRDALLRGVNDELSSRSLRSAGNSLIVLSTPRPTPSSTGQG
TARELLLGSTPPASQRHNEERVNAHERNCRRANFATRHGADGSLEYLVAN
RDALLRGVSNELSSPSLRSAGNSLIVLSTPRPAPSSTGQGTAEEAASGRS
VEEQASRERHDVGRLTSSRAADRGIETVEPEVTGPATVSRLNSPSILSTD
ARPHSRQTSESSRPSPRGMRASGSSSTLPVSNMEVAANPGRGLQQEMIEL
AMESIDEERGRLMLEIARLRGQQHQSLAHLRRLQREQLVVRQRQVSTLSA
IVNSFGRTVEAASALPHGDNSSLGRISSDVVSTLRRMLRLLSATVPVVAP
AGRSAGQLLASSPLSTTTATRPDGALPTPTSAQHPRSAARGRSAGDGPTG
TYSVGGRVALRPTGVDLTQEVIDAALQALPRLAAAATVISDARRMQGYVA
GLAGGAPGAPEERRCCSTETIAALPDAPSCAAGVVEGDGGGGDDGLRGCV
ICLSEGSVTAQLLCRLPCNHVFHRVCVGKWLRMQDSCPTCRRQVPNIEAG
STATTTPAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD