prot_P-littoralis_Contig623.45.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig623.45.2
Unique Nameprot_P-littoralis_Contig623.45.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length673
Homology
BLAST of mRNA_P-littoralis_Contig623.45.2 vs. uniprot
Match: D8LER5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER5_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 4.940e-107
Identity = 302/637 (47.41%), Postives = 347/637 (54.47%), Query Frame = 0
Query:   62 TDEYVYRDPAPLKWRIFEAVAKTNGQRAFGLYWSALREFMRGWLPRCDLDEALKTSLGTDNVHLHNEMILCLLNNARCRHLPAELVSQVPASYRGKVAIHATVTPPPASAP-------------LPAFSSPTALRAGSSASAVSRAPSSNDTAVSSSLARLPSNSXXXXXXXXNASSPFQGKRTEGLLLLNAVKSEGAAIDKNXXXXXXXXXXXXXXXXKEKPGGTNSTAVPAPLPLSAIKLEADSGGKSQASPA------SFQGGKSRRDDDRIHPAAAATXXXXXXXXXXXXXXXXVVVAEEDRVLLAAEQAQLSXXXXXLLEDAIECHFGAGSDLWRPWSSPEVEGGGWGTPGRTEPRRGPQLLLPLRSSPGKKRSLSASSESSSSPTGGCNQQQQCFERTYKALKSEGGTTAGSP--AAANRGCVYNP----------GAAAXXXX---KAAAEQLSPSHRAQRVPGARALAPFLQACTASQQMKVSHEVCRVMTAGVKEYLRRIMEACLVNAKGGQRGG---LEDAARGAGAAXXXXXXTGGATA----VRTPSTGGDPCRATASNG--TXXXXXXXXXXXXXXXXXXXXXGGVRRIVLTPGHLQTALETTPRLVGPPSAARTQWRRVATYA 655
            TDE++Y+DPA LKW+IFEAVAK NGQRAF  YWSALR+FM GWLPR  LDEAL  SLG DN+HLHNE+ILCLLNNARCR+LPA+LVSQVPAS+RGKV +H T                      +P    P    + S +S   ++  SN +                 XXXX AS PFQGKR EGLLL     +EG A+D +                K + G     A  AP         A SG  S  +P+      S  GG+ RRDDDRI                       +V AE     L +  AQL       LED IE  FG GSDLW PWSS E     WG+ GR E            SS G KR    S E++S+   GC       ER  K+LK+EGG  A     +AAN G +Y P          GAA        +AAAEQLSPSHR+QRVPGARALAPFLQA TASQ+MKVSHEVCRVMTAGVKEYLRRI+EACLVNA+ G+R G   ++   RG   A      + GA A          G     AT      T      XXXXXXXXXXXXXXXG     VLTPGHLQ+ALETTPRLVGPPS+ R QWRRVATYA
Sbjct:   25 TDEHLYQDPASLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLPRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKV-VHTTXXXXXXXXXXXXXXXXXXXXXAIPRRPVPVLNGSNSGSSPCGKSGLSNGSXXXXXXXXX--------XXXXXASLPFQGKRAEGLLL----NAEGYAVDGSGLSAAPV---------KTEFGSGAKPATQAPGVAKLETTAARSGLTSAVAPSAGDDAVSSPGGERRRDDDRI-------------PRGERGGVDCLVEAE-----LLSRDAQL-------LEDEIEASFGTGSDLWHPWSSREE----WGS-GRLE----------RSSSQGVKRPAPLSQETNST---GC----YANERDTKSLKTEGGVAAXXXXXSAAN-GALYCPEPRSTTREMKGAAPALEQAAARAAAEQLSPSHRSQRVPGARALAPFLQAVTASQKMKVSHEVCRVMTAGVKEYLRRIIEACLVNARDGRRRGKVEVKAGVRGIAPAANPSKASNGAVAPPXXXXKXQVGAXXXGATTXXXXXTLMSPPAXXXXXXXXXXXXXXXG-----VLTPGHLQSALETTPRLVGPPSSTRAQWRRVATYA 586          
BLAST of mRNA_P-littoralis_Contig623.45.2 vs. uniprot
Match: A0A6H5KRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA3_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.230e-92
Identity = 280/688 (40.70%), Postives = 334/688 (48.55%), Query Frame = 0
Query:   19 KLVKLEQPVDSTSISTTGNSSNRVDLGRGIGEATAVAASA------HGDTDEYVYRDPAPLKWRIFEAVAKTNGQRAFGLYWSALREFMRGWLPRCDLDEALKTSLGTDNVHLHNEMILCLLNNARCRHLPAELVSQVPASYRGKVAIHATVTPPPASAPLPAFSSPTALRAGSSASA-------VSRAPSSNDTAVSSSLARLPSNSXXXXXXXXNASSPFQGKRTEGLLLLNAVKSEGAAIDKNXXXXXXXXXXXXXXXXKEKPGGTNSTAVPAPLPLSAIKLEADSGGKSQASPA------SFQGGKSRRDDDRIHPAAAATXXXXXXXXXXXXXXXXVVVAEEDRVLLAAEQAQLSXXXXXLLEDAIECHFGAGSDLWRPWSSPEVEGGGWGTPGRTEPRRGPQLLLPLRSSPGKKRSLSASSESSSSPTGGCNQQQQCFERTYKALKSEGGTTAGSPA----AANRGCVYNPGAAAXXXX---KAAAEQLSPSHRAQRVPGARALAPFLQACTASQQMKVSHEVCRVMTAGVKEYLRRIMEACLVNAKGGQRGGLEDAARGAGAAXXXXXXTGGATAVRTPSTGGDPCRATASNGTXXXXXXXXXXXXXXXXXXXXXGGVRRIVLTPGHLQTALETTPRLVGPPSAARTQWRRVATYA----GEHRT----VTGRAGRSEPSL 672
            +LVK+EQP    S +T  ++ + V +   +    A A +       +  TDE++Y+DP  LKW+IFEAVAK NGQRAF  YWSALR+FM GWL R  LDEAL  SLG DN+HLHNE+ILCLLNNARCR+LPA+LVSQVPAS+RGKV +H T                                      P   ++ +S++ A               AS PFQGKR EGLLL     +EG A+D                  K + G     A  AP         A SG  +  +P+      S   G+ RRDDDRI                       +V AE     L +  AQL       LED IE  FG GSDLW PWSS E     WG+ GR E            SS G KR    S E+ S+   GC       ER  K LK+E    A        AAN G ++  GAA        +AAAEQLSPSHR+QRVPGARALAPFLQA TASQ+MKVSHEVCRVMTAGVK+ +        VN      G +                TGG   V+       P   T +  +       XXXXXXX          R  VLTPGHLQ ALETTPRLVGPPS+ R QWRRVATYA    G H+     + G A  S P+L
Sbjct:   19 RLVKVEQPTVPRSSNTGSSADHGVSMAEAVAAELAAAETGGTGGGQNAVTDEHLYQDPGSLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLSRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKV-VHTTAXXXXXXXXXXXXXXXXXXXXXXXXXXPVLXXXXXXXXPPCGNSGLSNAAAA--------------ASLPFQGKRAEGLLL----NAEGYAVDGGSLSAAPL---------KTEYGSVEKPATQAPGVAKLEATAARSGLTAAVTPSAGDDAVSSPEGERRRDDDRI-------------PRGERGGVDCLVEAE-----LLSRDAQL-------LEDEIEASFGTGSDLWHPWSSREE----WGS-GRLE----------RSSSRGVKRPAPLSQETDST---GC----YANERDAKYLKTESEVAAXXXXXXXXAAN-GALHCAGAAPALEQAPARAAAEQLSPSHRSQRVPGARALAPFLQAVTASQKMKVSHEVCRVMTAGVKDGMPPA-----VNPSKASNGAVAP-------------PTGG---VKKQVAAASPVTTTPTAASTLMSSPSXXXXXXXAAREVVGEASRGGVLTPGHLQLALETTPRLVGPPSSTRAQWRRVATYAAAGGGVHQLPGTGIRGTARSSGPAL 609          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig623.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LER5_ECTSI4.940e-10747.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRA3_9PHAE1.230e-9240.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PFAMPF12767SAGA-Tad1coord: 75..541
e-value: 1.0E-10
score: 41.8
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PANTHERPTHR21277TRANSCRIPTIONAL ADAPTER 1coord: 91..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..603
NoneNo IPR availablePANTHERPTHR21277:SF5TRANSCRIPTIONAL ADAPTER 1coord: 91..641

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig623contigP-littoralis_Contig623:78002..83410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig623.45.2mRNA_P-littoralis_Contig623.45.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig623 77500..83507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig623.45.2 ID=prot_P-littoralis_Contig623.45.2|Name=mRNA_P-littoralis_Contig623.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=673bp
MERKKKTSKASGSKPATKKLVKLEQPVDSTSISTTGNSSNRVDLGRGIGE
ATAVAASAHGDTDEYVYRDPAPLKWRIFEAVAKTNGQRAFGLYWSALREF
MRGWLPRCDLDEALKTSLGTDNVHLHNEMILCLLNNARCRHLPAELVSQV
PASYRGKVAIHATVTPPPASAPLPAFSSPTALRAGSSASAVSRAPSSNDT
AVSSSLARLPSNSSSSSSSSANASSPFQGKRTEGLLLLNAVKSEGAAIDK
NNAAAAAVGGGNPPTDEKEKPGGTNSTAVPAPLPLSAIKLEADSGGKSQA
SPASFQGGKSRRDDDRIHPAAAATAAVETPTPTKRSRTATVVVAEEDRVL
LAAEQAQLSAEQAQLLEDAIECHFGAGSDLWRPWSSPEVEGGGWGTPGRT
EPRRGPQLLLPLRSSPGKKRSLSASSESSSSPTGGCNQQQQCFERTYKAL
KSEGGTTAGSPAAANRGCVYNPGAAAAAAAKAAAEQLSPSHRAQRVPGAR
ALAPFLQACTASQQMKVSHEVCRVMTAGVKEYLRRIMEACLVNAKGGQRG
GLEDAARGAGAARGAHAATGGATAVRTPSTGGDPCRATASNGTTPPPPPS
QPAAAAVAAAAAKSGGVRRIVLTPGHLQTALETTPRLVGPPSAARTQWRR
VATYAGEHRTVTGRAGRSEPSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024738Hfi1/Tada1