prot_P-littoralis_Contig621.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig621.44.1
Unique Nameprot_P-littoralis_Contig621.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length612
Homology
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: D7FR54_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR54_ECTSI)

HSP 1 Score: 721 bits (1860), Expect = 8.850e-256
Identity = 372/433 (85.91%), Postives = 402/433 (92.84%), Query Frame = 0
Query:  119 VGTGEAKGRSIRVEEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEV 551
            V TGEAK RSIR+EE++CFRRRMGIKV+GEEVADPMESF +MPSA + EDA QTRR LL NVE SAWKEPTPVQMQAVPILV GRDLLAAAPTGSGKTAAFV+PM+LRLG+Q AD + SGVRG+LLAPTRELAAQIHRDVVRLSRGR+L VCLLTKAGA K A A  MDSR ALSGYDIVVSTPMRLVALVRE AV LA+VEM+VLDEADKLFD+G   GGSDKAF+GQVDEVL+ACS+Q+VQRALFSAT+GQQVK+L+ESVLRDP+FL VGT NAGA +IDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGIN DVMHA RTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFKGVNMV+NYDFPQSAVSYIHRIGRTXXXX HGVAVTLFTESDM+SLRSIANV+RLSGCE+
Sbjct:   22 VETGEAKARSIRLEEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDPIFLTVGTQNAGAADIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFKGVNMVINYDFPQSAVSYIHRIGRTXXXXXHGVAVTLFTESDMNSLRSIANVIRLSGCEM 454          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A6H5JCM6_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM6_9PHAE)

HSP 1 Score: 608 bits (1569), Expect = 1.770e-213
Identity = 309/374 (82.62%), Postives = 341/374 (91.18%), Query Frame = 0
Query:  119 VGTGEAKGRSIRVEEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFK 492
            V TGEAK R IR+EE++CFRRRMGIKV+GEEVADPM SF +MPSA + ++A QTRR LL NVE SAWKEPTPVQMQAVPILV GRDLLAAAPTGSGKTAAFV+PM+LRLG+Q AD + SGVRG+LLAPTRELAAQIHRDVVRLSRGR+L VCLLTKAGA K A A  MDS+ ALSGYDIVVSTPMRLVALVRE A+ LA+VEM+VLDEADKLFD+G   GGSDKAF+GQVDEVL+ACS+Q+VQRALFSAT+GQQVK+L+ESVLRD +FL VGT N+GA +IDQRLVYVGREEGKLLA+RQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGIN DVMHA RTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFK
Sbjct:   22 VETGEAKARLIRLEEVACFRRRMGIKVKGEEVADPMASFSEMPSASTSKEAAQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSKNALSGYDIVVSTPMRLVALVRERAICLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDHIFLTVGTQNSGAADIDQRLVYVGREEGKLLAVRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFK 395          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A2D4C2B4_PYTIN (RNA helicase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2B4_PYTIN)

HSP 1 Score: 484 bits (1245), Expect = 6.090e-161
Identity = 254/465 (54.62%), Postives = 337/465 (72.47%), Query Frame = 0
Query:  132 EEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFM 596
            EE+  FR++M I+V G  V  P+ +F  M    +     + R  LL N+E S +KEPTP+QMQA+P L+ GRD+LA APTGSGKTAAF IPM+  LG      +  G+R V+L+PTRELA QI  +  RLS GRK H+ LL+KA AA      S         +D+V++TP+RLV LV+E  + L+ VEM+ LDEAD+LFD G         FV Q+DE+L+AC++  VQRA+FSAT+ Q V+++A+SVLRDPV +++G  NAGA +I+Q+LV+VG+EEGKL+A++QL+QEGLR P L+F+Q+K+RA  L+HEL+YDGIN   +HA RT++QRD+ I++FR G++WVLICTDLM+RGIDFK VNMV+NYDFPQ AVSYIHRIGRT    R G+AVT FTE DM  LR+IANVM+LSGC+V DWMLT+KK   + R++  +  P R  I TVS YD+ QK H++ M
Sbjct:  172 EEVRLFRKQMNIRVEGTSVPAPIATFDAMKLNAT---QLKMRSVLLHNIEASEYKEPTPIQMQAIPSLLLGRDVLATAPTGSGKTAAFAIPMLANLGAP----QQQGIRAVVLSPTRELAVQIFHEFQRLSAGRKFHIVLLSKATAATMI---SSIKNNCTVNHDLVIATPLRLVHLVQEAKLDLSMVEMICLDEADRLFDMG---------FVEQIDEILAACTHPRVQRAMFSATMLQGVEEMAQSVLRDPVKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIQEGLRLPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETIRQFRAGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRKGLAVTFFTEDDMAYLRTIANVMKLSGCDVPDWMLTLKKASATKRKQLLKAPPQRKRISTVSGYDL-QKAHKRKM 616          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A225VXV3_9STRA (RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VXV3_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 2.820e-159
Identity = 257/469 (54.80%), Postives = 340/469 (72.49%), Query Frame = 0
Query:  132 EEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFMINDS 600
            E +   RR++GI+V G  V  P+ SF DM    S   A+Q +R LL+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF IP++  L        GSG+R ++LAPTR+LA QI  +  RL+ G+KLHV LL+KA AA  A   S    K    +D++++TP+RLV L++E  V L+ VEM+ LDEAD+L + G         FV QVDE+ +AC++ +VQRA+FSAT+ + V++LA++VLRDPV + VGT NAGA  IDQ+LV+VG+EEGKL+A++QL+ EGL+ P L+F+Q+K+RA  L+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMV+NYDFPQSAVSYIHRIG  XXXX    AVT FTE DM  LR+IANVM++SGCEV DWML++KK   S R++  +  P R  I TVS YD+ QK +R   +  S
Sbjct:    9 EGVQMLRRQLGIRVSGVSVPAPITSFADM-RLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANLAA--GSGTGSGIRSIVLAPTRDLAVQIRTEFTRLAAGKKLHVTLLSKATAATIA---SQTKSKLAVNHDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGATTIDQKLVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDL-QKSNRLKQMKQS 461          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A1V9ZVZ5_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVZ5_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 3.440e-159
Identity = 257/476 (53.99%), Postives = 337/476 (70.80%), Query Frame = 0
Query:  132 EEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFMI--NDSKKSAA 605
            ++I   R+R+ I V G  V DP+  F  M +A S       +  LL N+E S +K PT +QMQA+P ++  RD+L  APTGSGKTAAF IPM+L L     D    G+R ++LAPTRELA QIH +  RLS G+K H+ LL+KA A+  A      ++     YDIV++TP+RLV L+ E ++ L  VEM+ LDEAD+LF+ G         FV Q+DEV +AC+N  +QR +FSAT+ Q V+++A+SVL+DPV + +G  NAGA+ I+QRL++VG+EEGKL+A++QL+QEGL+ PVL+F+Q+KDRAK L+HELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMV+NYDFPQSAVSYIHRIG  XXXX  G AVT FTESDM  LR+IANVM+LSGC+V DWML MKK     R++  +  P R  IETVS YD+++  + + M   N  KK  A
Sbjct:   54 DDIKHLRKRLNIAVWGTVVPDPIVEFAQMKAAKS------IKSVLLTNIESSEYKNPTAIQMQAIPAILQKRDVLGIAPTGSGKTAAFAIPMLLNLETPQQD---HGIRSIVLAPTRELAVQIHGEFQRLSSGKKFHISLLSKASASTMAS----HAKTCTVNYDIVIATPLRLVHLISEQSIPLDKVEMICLDEADRLFEMG---------FVEQIDEVFAACTNPSLQRMMFSATMLQGVEEMAQSVLKDPVKVAIGVKNAGAITINQRLMFVGKEEGKLVAMKQLIQEGLKLPVLMFVQNKDRAKELYHELVYDGINVGAIHADRTKEQRDKVIKDFRTGAVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMIYLRTIANVMKLSGCDVPDWMLAMKKASVRQRKQLLKAPPKRHRIETVSGYDLKKAHNHKLMKKHNAEKKKVA 507          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A485LSG4_9STRA (RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSG4_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 4.550e-159
Identity = 255/465 (54.84%), Postives = 333/465 (71.61%), Query Frame = 0
Query:  132 EEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFM 596
            +++   RRR+ I V+G  V DP+  F  M ++     A   +  +LRN+E S +K PTP+QMQ++P ++ GRD+L  APTGSGKTAAF IPM+L L   PA     G+R V+L PTRELA QIH +  RLS GRK H+ LL+KA AA      S  S+     YDIV++TP+RLV L+    V L  VEM+ LDEAD+LFD G         FV Q+D+V +AC+N  +QR +FSAT+ Q V+++A+SVL+DP+ +++G  NAGA  I QRL++VG+EEGKL+A++QL+QEGL+ PVL+F+Q+KDRAK L+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMV+NYDFPQSAVSYIHRIG  XXXX  G AVT FTESDM  LR+IANVM+LSGC+V DWML +KK     R++  +  P R  IETVS YD+++   R+ M
Sbjct:  189 DDLKALRRRLNISVQGTVVPDPLLEFAHMKTS-----ATALKSVVLRNIEASQYKNPTPIQMQSIPAILKGRDVLGIAPTGSGKTAAFAIPMLLNL-EAPAQ---QGIRSVVLVPTRELAVQIHAEFQRLSAGRKFHIVLLSKASAATI----SSHSKNCTVNYDIVIATPLRLVHLITNDGVKLDQVEMICLDEADRLFDMG---------FVEQIDDVFAACTNPTMQRMMFSATMLQGVEEMAQSVLKDPIKVSIGVKNAGATTIKQRLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGTVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMVHLRTIANVMKLSGCDVPDWMLNLKKASIRQRKQLLKAPPQRYRIETVSGYDLQKANKRRLM 631          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A8K1CQ63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ63_PYTOL)

HSP 1 Score: 481 bits (1237), Expect = 5.410e-159
Identity = 251/472 (53.18%), Postives = 345/472 (73.09%), Query Frame = 0
Query:  132 EEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFMINDSKKS 603
            EEI  FR++M I+V G  V  P+ +F  M   G+ E   + R  LL+N+E S +KEPTP+QMQA+P ++ GRD+LA APTGSGKTAAF IP++  LG+   +    G+R V+L+PTRELA QI  +  RLS GRK H+ LL+KA AA      S+ S   ++ +DI+++TP+RLV L++E  + L+ VEM+ LDEAD+LFD G         FV Q+DE+L+AC++ ++QRA+FSAT+ Q V+++A+SVLRDP+ +++G  NAGA +I+Q+LV+VG+EEGKL+A++QL+  GL+ P L+F+Q+K+RA  L+HEL+YDGIN   +HA RT++QRD+ +++FRTG++WVLICTDLM+RGIDFK VNMV+NYDFPQ AVSYIHRIGRT    R G AVT FTE DM  LR+IANVM+LSGCEV DWMLT+KK   + R++  +    R  I TVS YD+ QK H++ +    K S
Sbjct:  203 EEIRVFRKQMNIRVDGASVPPPIATFDAMKLVGTQE---KMRSVLLKNIEASEYKEPTPIQMQAIPSMLLGRDVLATAPTGSGKTAAFAIPLLANLGVPKQE----GIRAVVLSPTRELAVQISTEFHRLSAGRKFHIVLLSKATAATMIS--SIKSNCTVN-HDILIATPLRLVHLIQEAKLDLSMVEMVCLDEADRLFDMG---------FVEQIDEILAACTHPKIQRAMFSATMMQGVEEMAQSVLRDPIKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIHSGLKIPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETMRQFRTGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRQGYAVTFFTEDDMLYLRTIANVMKLSGCEVPDWMLTLKKASANKRKELVKAPLQRKRISTVSGYDL-QKSHKRHLAKSKKHS 654          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A2P4XS83_9STRA (RNA helicase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XS83_9STRA)

HSP 1 Score: 475 bits (1223), Expect = 1.150e-156
Identity = 261/484 (53.93%), Postives = 347/484 (71.69%), Query Frame = 0
Query:  121 TGEAKGRSIRVEEISCFRRRMGIKVRGEEVADPMESFVDM---PSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFMINDSK 601
            TG+    S   +E+   RR++GI+V G  V  P+ SF DM   PSA     A+Q +R LL+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF IP++  L      A  SG+R ++LAPTR+LA QI  +  RL+ G+KLH+ LL+KA AA  A   S    K    +D++++TP+RLV L++E  V L+ VEM+ LDEAD+L + G         FV QVDE+ +AC++ +VQRA+FSAT+ + V++LA++VLRDPV + VGT NAGA  IDQ LV+VG+EEGKL+A++QL+ EGL+ P L+F+Q+K+RA  L+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMV+NYDFPQSAVSYIHRIG  XXXX    AVT FTE DM  LR+IANVM++SGCEV DWML++KK   S R++  +  P R  I TVS YD+ QK +R   +  +K
Sbjct:  196 TGKKNPASAEQDEVQMLRRQLGIRVSGVSVPAPITSFADMRLDPSAS----AQQMKRHLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILGNLAA--GSATSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIA---SQTKSKLAVNHDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQELVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDL-QKANRLKQMKQAK 660          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: D0N7S6_PHYIT (RNA helicase n=13 Tax=Phytophthora TaxID=4783 RepID=D0N7S6_PHYIT)

HSP 1 Score: 474 bits (1219), Expect = 5.160e-156
Identity = 252/456 (55.26%), Postives = 337/456 (73.90%), Query Frame = 0
Query:  134 ISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQ 589
            +   RR++GI+V G  V  P+ SF DM    S   A+Q +R LL+N+E S +KEPT VQMQA+P L+  RD+LA APTGSGKTAAF IP++  L         SG+R ++LAPTR+LA QI  +  RL+ G+KLH+ LL+KA AA  A   S    K    +D++++TP+RLV L++E  V L+ VEM+ LDEAD+L + G         FV QVDE+ +AC++ +VQRA+FSAT+ + V++LA++VLRDPV + VGT NAGA  IDQ+LV+VG+EEGKL+A++QL+Q+GL+ P L+F+Q+K+RA  L+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMV+NYDFPQSAVSYIHRIG  XXXX    AVTLFTE DM  LR+IANVM++SGCEV DWML++KK   S R++  +  P R  I TVS YD+++
Sbjct:  218 VQMLRRQLGIRVSGVSVPAPITSFADM-RLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSLLLRRDVLATAPTGSGKTAAFAIPILANLAA--GSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIA---SQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHPKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLQQGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTLFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPMRHRINTVSGYDLQR 658          
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Match: A0A024TW13_9STRA (RNA helicase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW13_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 6.530e-156
Identity = 252/470 (53.62%), Postives = 338/470 (71.91%), Query Frame = 0
Query:  127 RSIRVEEISCFRRRMGIKVRGEEVADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILVGGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTRELAAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVSTPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDEVLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNYDFPQSAVSYIHRIGRTXXXXRHGVAVTLFTESDMDSLRSIANVMRLSGCEVADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFM 596
            +S   ++I   RRR+ I V G  V DP+  F  M +     +A   +  +LRN+E S +K PTP+QMQ++P ++  RD+L  APTGSGKTAAF IPM+L LG    D RG  +R V+L PTRELA QIH +  RLS GRK H+ LL+KA AA      S  S+     YDIV++TP+RLV L+ +  V+L  V+M+ LDEAD+LF+ G         FV Q+D++ +AC+N ++QR +FSAT+ Q V+++A+SVL+DP+ +++GT NAGA  I Q+L++VG+EEGKL+A++QL+QEGL+ PVL+F+Q+KDRAK L+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMV+N+DFPQSAVSYIHRIGR XXXX  G AVT FTE+DM  LR+IANVM+LSGC+V  WML +KK     R++  +  P R  IETVS YD+++   R+ M
Sbjct:  188 KSSHSDDIKALRRRLNIYVEGTVVPDPILEFAQMKT-----NATALKAVVLRNIEESQYKNPTPIQMQSIPAILKQRDVLGIAPTGSGKTAAFAIPMLLNLGAP--DVRG--IRSVVLVPTRELAVQIHAEFQRLSVGRKFHIVLLSKASAATI----SSHSKTCTVNYDIVIATPLRLVHLIHKENVTLDTVDMICLDEADRLFEMG---------FVEQIDDIFAACTNPKMQRMMFSATMLQGVEEMAQSVLKDPIKISIGTKNAGASTITQKLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGVVWVLICTDLMSRGIDFKGVNMVINFDFPQSAVSYIHRIGRXXXXXXPGEAVTFFTENDMVYLRTIANVMKLSGCDVPPWMLNLKKASMRKRKQLLKAPPERHRIETVSGYDLQKANKRRLM 635          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig621.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR54_ECTSI8.850e-25685.91RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCM6_9PHAE1.770e-21382.62RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A2D4C2B4_PYTIN6.090e-16154.62RNA helicase (Fragment) n=1 Tax=Pythium insidiosum... [more]
A0A225VXV3_9STRA2.820e-15954.80RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1V9ZVZ5_9STRA3.440e-15953.99RNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A485LSG4_9STRA4.550e-15954.84RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
A0A8K1CQ63_PYTOL5.410e-15953.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XS83_9STRA1.150e-15653.93RNA helicase n=2 Tax=Phytophthora palmivora var. p... [more]
D0N7S6_PHYIT5.160e-15655.26RNA helicase n=13 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A024TW13_9STRA6.530e-15653.62RNA helicase n=1 Tax=Aphanomyces invadans TaxID=15... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 184..402
e-value: 2.1E-42
score: 156.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 196..387
score: 25.72459
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 436..520
e-value: 5.8E-32
score: 122.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 412..520
e-value: 4.9E-30
score: 104.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 398..559
score: 22.743317
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 189..376
e-value: 3.2E-36
score: 124.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 121..389
e-value: 5.2E-63
score: 214.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 390..564
e-value: 1.1E-52
score: 179.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 238..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..584
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 67..571
NoneNo IPR availablePANTHERPTHR47958:SF27DEAD-BOX ATP-DEPENDENT RNA HELICASE 57coord: 67..571
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 399..529
e-value: 7.70019E-55
score: 180.396
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 323..331
IPR044764DDX52/Rok1, DEAD-box helicase domainCDDcd17957DEADc_DDX52coord: 176..390
e-value: 7.35996E-94
score: 284.867

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig621contigP-littoralis_Contig621:140787..146421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig621.44.1mRNA_P-littoralis_Contig621.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig621 140787..146421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig621.44.1 ID=prot_P-littoralis_Contig621.44.1|Name=mRNA_P-littoralis_Contig621.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=612bp
MSSRELLEMLGSGAAFGGKARQPVSKSQEDEKKPPVNFFAAAGSPRASGT
KRRRAPIHGQKAGCSAATQALVSDVGSKVVARVSSKGKNCVAELALFAKS
ANHASASEGKPTDPVGREVGTGEAKGRSIRVEEISCFRRRMGIKVRGEEV
ADPMESFVDMPSAGSGEDARQTRRTLLRNVEGSAWKEPTPVQMQAVPILV
GGRDLLAAAPTGSGKTAAFVIPMVLRLGMQPADARGSGVRGVLLAPTREL
AAQIHRDVVRLSRGRKLHVCLLTKAGAAKTAGAASMDSRKALSGYDIVVS
TPMRLVALVREGAVSLANVEMLVLDEADKLFDSGGTGGGSDKAFVGQVDE
VLSACSNQEVQRALFSATIGQQVKDLAESVLRDPVFLNVGTDNAGAVNID
QRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGI
NADVMHAGRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVVNY
DFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDSLRSIANVMRLSGCE
VADWMLTMKKERRSDRRKRERGAPHRDGIETVSKYDIRQKRHRQFMINDS
KKSAALGLNKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR044764DDX52/Rok1_DEADc