prot_P-littoralis_Contig116.114.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig116.114.2
Unique Name	prot_P-littoralis_Contig116.114.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	236

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig116.114.2 vs. uniprot
Match: A0A6H5L6L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L6_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.330e-28
Identity = 75/168 (44.64%), Postives = 98/168 (58.33%), Query Frame = 0

Query:   34 IKEFSETISAEDDSNDLGEEKERSKTAASESIDERQQXXXXXPRTXXDEEYERDSAQRKKNXXXXXXXXXXXXXXXXXXXXXWGGLLVKKKIQFEAGDLIEAEWRTTGWWYVGYVQGDPE--GQE---GSNGAAAAKSRARKQDLFHVVFADGDEADVPGKNLKRLEP 196
             KE+S++ S  D++ND  E KE ++T   E  DE +       RT  D+E+E D AQ+KKN                     W  LL +KK QFE GDL+EAEW  TGWWYVGY++   E  G+E   G+ GA  AK+  R ++LFHVVF DGDEADV  ++LKRL+P
Sbjct:   48 FKEYSDSAS-HDENNDTAEAKESAETKLPE--DEEESGDDDWHRTASDQEHEMDVAQQKKNRRTRAQPGAKRGGRRDTERGGWFQLLGRKKTQFEPGDLVEAEWAGTGWWYVGYIRSASEERGEESAGGTPGAPQAKTSKRSKELFHVVFEDGDEADVIRRDLKRLQP 212

[Close]

BLAST of mRNA_P-littoralis_Contig116.114.2 vs. uniprot
Match: D8LF78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF78_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.070e-21
Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 0

Query:   34 IKEFSETISAEDDSNDLGEEKERSKTAASESIDERQQXXXXXPRTXXDEEYERDSAQRKKNXXXXXXXXXXXXXXXXXXXXXWGGLLVKKKIQFEAGDLIEAEWRTTGWWYVGYVQGDPEGQEGSNGAAA------AKSRARKQDLFHVVFADGDEADVPGKNLKRLEP 196
            I+E+S++ S +D++ND  E KE ++T   E  D  +    XX   XX   +E D AQ+KKN                     W  LL +KK QFE GDL+EAEW  TGWWYVGY+ G   G+              AK+  R ++LFHVVF DGDEADV  ++LKRL+P
Sbjct:   49 IREYSDSAS-DDENNDTAEAKESAETKRVE--DREESGDDXXXXXXXXXXHEMDMAQQKKNRRARAQPGAKGGGRRDTGRGGWFQLLGRKKTQFEPGDLVEAEWAGTGWWYVGYI-GSGSGERXXXXXXXXXXXPQAKTSKRSKELFHVVFEDGDEADVIRRDLKRLQP 213

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig116.114.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig116.114.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L6L6_9PHAE	3.330e-28	44.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LF78_ECTSI	1.070e-21	41.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.140		coord: 122..197 e-value: 4.2E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..218

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig116	contig	P-littoralis_Contig116:433736..434764 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig116.114.2	mRNA_P-littoralis_Contig116.114.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig116 433736..434764 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig116.114.2 ID=prot_P-littoralis_Contig116.114.2|Name=mRNA_P-littoralis_Contig116.114.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=236bp
MDENEESASAASNDRNAGENVQETNVTTGSPSLIKEFSETISAEDDSNDL
GEEKERSKTAASESIDERQQEDRPKPRTAADEEYERDSAQRKKNRRARRQ
PGAKRGGRRETRRGGWGGLLVKKKIQFEAGDLIEAEWRTTGWWYVGYVQG
DPEGQEGSNGAAAAKSRARKQDLFHVVFADGDEADVPGKNLKRLEPMTDK
NGQPTGSGDGQLPRHVPVADLGSGRLHCNVDLPLYQ