mRNA_P-littoralis_Contig620.39.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: D8LSY4_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY4_ECTSI) HSP 1 Score: 345 bits (885), Expect = 7.610e-118 Identity = 178/189 (94.18%), Postives = 183/189 (96.83%), Query Frame = 1
Query: 154 GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMML+ GN+ LA GMVGVAF R+P +HFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRR QLPLGALPYLVGSVFPL+GVAVPFWLYLRSVEAK
Sbjct: 32 GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLIAGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRLQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 220
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A6H5L781_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L781_9PHAE) HSP 1 Score: 341 bits (875), Expect = 2.370e-109 Identity = 179/196 (91.33%), Postives = 185/196 (94.39%), Query Frame = 1
Query: 154 GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV-------WSKRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMML+TGN+ LA GMVGVAF R+P +HFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV WSKRR+QLPLGALPYLVGSVFPL+GVAVPFWLYLRSVEAK
Sbjct: 572 GDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLITGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVVAGVLYEWSKRRQQLPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAK 767
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A836CM96_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM96_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.470e-72 Identity = 120/196 (61.22%), Postives = 151/196 (77.04%), Query Frame = 1
Query: 157 DVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWS--------KRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
D+IP V+LL NGFLL+YAFSIETIYAMF+KDNFGYG + LS +FA+NGV VG LQL+ MRHLV +GKHM+L +GN+ LA+GM+G++ R +HF LF+VHI+GYS+ADTALV+LISRYA QGRSLGLNQAAQS ARV+SP+ + K + LP GALPY+VGSV PL+ +A P LY+ S++ K
Sbjct: 29 DIIPPEVLLLAMNGFLLVYAFSIETIYAMFMKDNFGYGHATLSTLFAVNGVLVGFLQLVLMRHLVAKMGKHMLLASGNLLLALGMLGLSLVRYTPLHFLLFSVHILGYSMADTALVSLISRYAGSNAQGRSLGLNQAAQSTARVISPLVAGYLYTNSKKLAEGLPPGALPYVVGSVMPLLAIAAPLILYMGSIDRK 224
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A7S3UWB2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB2_HETAK) HSP 1 Score: 232 bits (592), Expect = 1.620e-69 Identity = 119/194 (61.34%), Postives = 149/194 (76.80%), Query Frame = 1
Query: 160 VIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVW-------SKRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
V+P V+LL GNGFLLMYAF++ET+YA FLKDNFGYGESVL+ +F LNG++VG+LQ+ ++ LV LGKHM+LV GN LA GMVG+A R P +HFA+F+VHI+GY++ADTAL +LISRY+SP TQG LGLNQA QS AR++SP+ SKR LP+GALPYL G+ PL+ V PF+LY RSV K
Sbjct: 331 VVPFPVLLLTGNGFLLMYAFAVETVYAAFLKDNFGYGESVLATLFVLNGMSVGMLQVFFIKKLVNKLGKHMLLVLGNALLAAGMVGLALIRQPLVHFAMFSVHILGYAIADTALSSLISRYSSPDTQGTHLGLNQAVQSFARMISPLVAGALYQRSKRAGALPVGALPYLAGAAAPLLAVLPPFFLYARSVNKK 524
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A482SL66_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL66_9ARCH) HSP 1 Score: 214 bits (544), Expect = 1.040e-62 Identity = 107/193 (55.44%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 163 IPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV-------WSKRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
IP V+LLV NGF +MYAF+ ETIYAMF+KD+FGYGE LS +FA+NG +GV Q+ ++ L+ +LGKH L GN LA+GM+GVA R +HF LF +H++GYS+ADTAL +LI++Y+SPA QGR L LNQA QS ARVVSP+ WSK+ LP+GALP+L G++ P + VAVP LY++S+ +K
Sbjct: 328 IPLEVLLLVLNGFSIMYAFATETIYAMFIKDSFGYGEQALSTLFAVNGFFIGVFQVFLIKPLIHMLGKHATLAFGNFLLALGMIGVALVRERTLHFLLFALHVVGYSIADTALASLITKYSSPANQGRDLALNQACQSCARVVSPLLAGILYEWSKKSAMLPMGALPFLAGALCPAVAVAVPSLLYVKSIASK 520
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A4D9D6H6_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H6_9STRA) HSP 1 Score: 214 bits (545), Expect = 3.300e-62 Identity = 112/199 (56.28%), Postives = 149/199 (74.87%), Query Frame = 1
Query: 148 AGGDVIPRAVMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV-------WSKRRKQ-LPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
AG + V LL+ NGFLLMYAFS+ET+YAMF+KDNFGYGE+ L VFALNG+AVG+LQ+ +++L LGKH+ML GN+ LA+GMVG++ R HF++F++HI+GY+++DTAL +LISRY++P QGR+LG + AAQS AR++SP+ WSK LP GALPY+ GS FPL+GV VP LYL+S+E K
Sbjct: 417 AGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERK 615
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: K8YQK8_NANGC (Major facilitator superfamily mfs 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQK8_NANGC) HSP 1 Score: 175 bits (443), Expect = 7.900e-52 Identity = 90/165 (54.55%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 250 KDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV-------WSKRRKQ-LPLGALPYLVGSVFPLIGVAVPFWLYLRSVEAK 720
+DNFGYGE+ L VFALNG+AVG+LQ+ +++L LGKH+ML GN+ LA+GMVG++ R HF++F++HI+GY+++DTAL +LISRY++P QGR+LG + AAQS AR++SP+ WSK LP GALPY+ GS FPL+GV VP LYL+S+E K
Sbjct: 4 RDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERK 168
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A7S1UC38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC38_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.330e-34 Identity = 75/195 (38.46%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 139 AAGAGGDVIPRAVMLLVGNGFLLMYAFS--IETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAFSRNPAIHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRKQLPLGALPYLVGSVFPLIGVAVPFWLYLRSVEA 717
A+G GG + LL+ N M+A S I+ +YA+FLK+ FG LS ++A NG+ VG L + ++H+VR LG HMMLV NV ++G+ +A ++ +HFA F ++I +SL D A V+L++ Y + GR G+ A SMAR+ +P + R Q LP+L G+ FPL+ PF L++R A
Sbjct: 247 ASGLGGRLRIAPEYLLLANSMFTMFALSGCIDGVYAVFLKERFGLASKALSGIYAFNGLLVGCLNVFALKHMVRALGSHMMLVAANVIASVGLASIAMAQQTTLHFASFCLYITAFSLGDVAFVSLLTSYVDSSRIGRLFGMKVALDSMARIAAPAIASRLFQQSQ-TLPFLCGAAFPLMSAVFPFTLWMRKRRA 440
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: UPI0019A3D0F8 (MFS transporter n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI0019A3D0F8) HSP 1 Score: 69.7 bits (169), Expect = 3.660e-10 Identity = 59/187 (31.55%), Postives = 91/187 (48.66%), Query Frame = 1
Query: 166 PRAVMLLVGNGFLLMYAFS-IETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAF-------SRNPAIHFALFTVHIM---GYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRKQLPLGALPYLVGSVFPLIGVAVPFW 693
PR LL+ F+ +AF+ +I+ +FL D +G+G S + VF G+ V+Q +R L+ G+ + + G +G+V +AF +R P + AL+T + G L +L LIS S QG++LG NQA QS+A ++ P+W+ G VF GV PFW
Sbjct: 217 PRIQGLLIAF-FIFNFAFAGFSSIFVLFLNDRYGWGPSQAAAVFFFIGIVSTVVQGGLIRSLLPRFGESKLAIGG-----LGLVAIAFGGIVLIPARGPILVPALYTTQALLALGVGLIIPSLRGLISNRVSDQEQGKTLGGNQALQSVATILGPLWA---------------GWVFDHSGVLSPFW 382
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Match: A0A2T2WAT5_9CYAN (Tetracycline resistance MFS efflux pump n=9 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2WAT5_9CYAN) HSP 1 Score: 66.2 bits (160), Expect = 5.550e-9 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 199 FLLMYAFS-IETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLVTGNVFLAMGMVGVAF--SRNPAIHFALFTVHIM---GYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPVWSKRRKQLPLGALPYLVGSVFPLIGVAVPFWL 696
F+ +AF+ +I+ +FL +G+G S +MVF G+ ++Q +R L+ G+ + V G V + + GV + +P + AL+T + G L +L LIS S QG++LG NQA QS+A ++ P+W+ G +F G+ PFW+
Sbjct: 227 FIFNFAFAGFSSIFVLFLNTRYGWGPSQAAMVFFFIGIVSTLVQGGLIRQLLPRFGEAKLAVAGLVLVVLAFGGVVLIPAGSPVLIPALYTTQALLALGVGLVIPSLRGLISIRVSAQEQGKTLGGNQALQSVASILGPLWA---------------GWIFDRSGMLSPFWM 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig620.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig620.39.1 >prot_P-littoralis_Contig620.39.1 ID=prot_P-littoralis_Contig620.39.1|Name=mRNA_P-littoralis_Contig620.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp MVPAHGDEFQEDDAAYSRGRAVVHGPQDVGVGEAAEGGSYVVDGAGAAGAback to top mRNA from alignment at P-littoralis_Contig620:97129..99762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig620.39.1 ID=mRNA_P-littoralis_Contig620.39.1|Name=mRNA_P-littoralis_Contig620.39.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2634bp|location=Sequence derived from alignment at P-littoralis_Contig620:97129..99762+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig620:97129..99762+ >mRNA_P-littoralis_Contig620.39.1 ID=mRNA_P-littoralis_Contig620.39.1|Name=mRNA_P-littoralis_Contig620.39.1|organism=Pylaiella littoralis U1_48|type=CDS|length=720bp|location=Sequence derived from alignment at P-littoralis_Contig620:97129..99762+ (Pylaiella littoralis U1_48)back to top |