mRNA_P-littoralis_Contig620.35.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig620.35.2
Unique NamemRNA_P-littoralis_Contig620.35.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A6H5L608_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L608_9PHAE)

HSP 1 Score: 821 bits (2121), Expect = 4.410e-287
Identity = 469/716 (65.50%), Postives = 524/716 (73.18%), Query Frame = 2
Query:  296 MSGNS-VYAAGLGLLIPLVGTSVCRKLWNHGLLRVRGRTTTEGKGLFNVTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVLIGFVVSVKVILDMMDPAGGNKKPQFEVTEEDVDALLENLDDSSSTADVLECLAASPQLCSEERRVLAEDMEPITAPLRQWLLNLEGGAPPLRGPRPCPPT----------------------------------QPSAGQGAAPPNKATARRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEFFSRGRKGEGNRRSARESPELSGVVKHNLVVLLSALHRAPSSCVVDTGDDXXXXXXXXXXXXXXXXXXXXXXXXXXDDSCQEASRKAGGTVAKRERTEGGGHGDGAEDGAGAESRLLAAVDAGGQLARERDRVVGLAEPLLDACLRVAARRPSPQLFGTVVETKAMLRRRLWSSQDPSATDRQQEEADMELDAAVPSIKVKSVVVETWGESQVALGDTVTATITIVREHAPEYQGFRRRRPEAGSFLAKGEPWWVILAGGKDGGSLIGVAPMLVDNLSNGVAECKMKFQAPTRPGFVNLTVSVKSPVFVGVDCEGSASFRVWRHDELKEDEDAGDW 2338
            MSG++ +YAAGLGL+IP+VG SVCRKLW+HGL   RGR   +GKGL NV  + QV VL ASCYAF+ VASSM+ E EHFDPYHILDLP+RAN+TVI+S YRRLSLKHHPDKNPGNR EANKKFN+VAKAYKALSDP+ARRNWEQYGHPDGYQPWTFDLA+P WLRPGKDT NGTL LYGL YMAVL+GFV+  KV LD++DPAGG K+P FEVT+EDV ALL NLDD+SSTADVLECLAA PQLCS ERRVLA +ME IT P+R WLL  EGGAPPLRGP    PT                                   P++G+  +P   A   +G+                                      GEFF++GR+GEGNRR+ARESPELS VV HNLVV+LSALHRAP          XXXXXXXXXXXXXXXXXXXXXXXXXX         K                           SRLLAAV AGG+LARE+D V GLAEPLLDAC++VAARR SPQL GTVVETKAMLRRRLWSS+DP+A +RQ+EE D++LDAAVPSIKVKSV VETWGESQVA+GDTVTATITI REHAPEYQG RRRRPEAGS +AKGEPWWV+LAGGK G SLI V PMLV+NL +G+AECKMKFQAP RPGFV+LTV VKSPVFVGVDCE +  FRVWRHDELKED+DAGDW
Sbjct:    1 MSGDTTMYAAGLGLIIPVVGISVCRKLWSHGLRAARGRAAPDGKGLLNVWFLGQVLVLGASCYAFNQVASSMQTEAEHFDPYHILDLPSRANATVIKSHYRRLSLKHHPDKNPGNRREANKKFNQVAKAYKALSDPEARRNWEQYGHPDGYQPWTFDLALPAWLRPGKDTDNGTLVLYGLAYMAVLLGFVLGAKVTLDLLDPAGGGKQPDFEVTDEDVKALLSNLDDTSSTADVLECLAACPQLCSAERRVLAGEMEAITDPVRDWLLEREGGAPPLRGPLSSSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESPASGEEQSPAAAAAGTKGEVD------------------------------------GEFFTQGRRGEGNRRTARESPELSRVVAHNLVVMLSALHRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXKG--------------------------SRLLAAVSAGGRLAREQDLVFGLAEPLLDACMQVAARRASPQLLGTVVETKAMLRRRLWSSEDPAALERQREEVDLDLDAAVPSIKVKSVAVETWGESQVAVGDTVTATITIAREHAPEYQGLRRRRPEAGSLIAKGEPWWVMLAGGKGGSSLIRVTPMLVENLGSGIAECKMKFQAPARPGFVDLTVFVKSPVFVGVDCESTTRFRVWRHDELKEDDDAGDW 648          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A835Z0Q2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.760e-29
Identity = 65/135 (48.15%), Postives = 90/135 (66.67%), Query Frame = 2
Query: 1943 VETWGESQVALGDTVTATITIVREHAPEYQGFRRRRPEAGSFLAKGEPWWVILAGGKDGGS--LIGVAPMLVDNLSNGVAECKMKFQAPTRPGFVNLTVSVKSPVFVGVDCEGSASFRVWRHDELKEDEDA-GDW 2338
            VETWGE Q+A+GDTVTA +T+ R HA  Y+GF+  +P  G+ + KGEPWWV+LA     G   L+G  P LVD+L       ++KF+AP  PG V+  V V+SPVF+GVD E + SF V   D++++D+D  GD+
Sbjct:    3 VETWGEDQIAVGDTVTAHVTLQRAHAGLYRGFKGLKPIEGTPVFKGEPWWVLLARVGPAGQRVLMGATPTLVDDLGKEQVTAEVKFKAPGVPGKVDYIVLVRSPVFIGVDVEQAGSFDVVGFDQIRDDDDXXGDY 137          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: UPI00109BD256 (translocation protein SEC63 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD256)

HSP 1 Score: 109 bits (273), Expect = 1.550e-20
Identity = 58/149 (38.93%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  404 RTTTEGKGLFNVTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            ++  + K +  ++L   V + A   Y  + + S  + E   +DPYH+L++   A+   IR QYRRLS+K+HPDK  G+     KKF ++AKAY+AL++ ++R+NWE+YG+PDG    +F +A+P WL   K+     LA YGL +M +L
Sbjct:   65 KSKPKSKTIRYISLFALVILWALFVYGGYRI-SQFEKEYVEYDPYHVLEIDRGASVAEIRRQYRRLSMKYHPDKETGDP----KKFMRIAKAYEALTNEESRKNWEEYGNPDGPGATSFGIALPSWLV-SKENSVWVLAAYGLAFMIIL 207          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A6P8HC20_ACTTE (translocation protein SEC63 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HC20_ACTTE)

HSP 1 Score: 108 bits (269), Expect = 2.780e-20
Identity = 60/157 (38.22%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  380 HGLLRVRGRTTTEGKGLFNVTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            H L++V+ ++ T    +   +L   V + A   Y  + + S  + E   +DPYH+L++   A+   IR QYRRLS+K HPDK  G+     KKF ++AKAY+AL++ ++R+NWE++G+PDG    +F +A+P WL   K+     LA YGL +M +L
Sbjct:   61 HRLIKVKPKSKT----IRYFSLFALVVLWALFVYGGYRI-SQFEREFVEYDPYHVLEIDRGASMAEIRRQYRRLSMKFHPDKESGDP----KKFMRIAKAYEALTNEESRKNWEEFGNPDGPGATSFGIALPSWLV-SKENSMWVLAAYGLAFMIIL 207          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A7S1B9Q5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9Q5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.300e-20
Identity = 68/166 (40.96%), Postives = 92/166 (55.42%), Query Frame = 2
Query:  527 FDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWL-RPGKDTGNGTLALYGLCYMAVLIGFVVSVKVILDMMDPAGGNKKPQFEVTEEDVDALLENLDDSSSTADVLECLAASPQ 1021
            FDP+ IL +   AN+T+I+  YR+LSL HHPDK  G   E    F +VA AYKALSDP AR NW+++GHPDG    +FD A+P WL  P   T    L LY   ++A++I  + +V       D     K     V   D + L   L+D S+  DVL  +A +P+
Sbjct:  106 FDPFEILGVATGANTTLIKRAYRQLSLVHHPDK--GGSEET---FQQVALAYKALSDPIARENWQKHGHPDGPVRASFDFALPSWLLHPQGITAIVLLVLYLGMFVAIIIYAIRTVA----KNDEDAVQKHQDMSVARPDQNYLQIMLEDKSTHEDVLYFIATTPE 262          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: D6WNC7_TRICA (Translocation protein SEC63 homolog-like Protein n=2 Tax=Tribolium TaxID=7069 RepID=D6WNC7_TRICA)

HSP 1 Score: 105 bits (262), Expect = 1.880e-19
Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  416 EGKGLFNVTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            +G   F + LV+ +  L     A+    S    E  +FDPY IL +P  A+   I+  YRRLSL  HPDK+ GN  E    F K++KAY+AL+D +AR+NWE+YG+PDG    +F +A+P W+   K+     L LYGL +M  L
Sbjct:   68 KGPKNFLIKLVIIIGWLLLLLLAYK--VSQFDYEMANFDPYEILGIPLGASQAEIKKAYRRLSLILHPDKDTGNEKE----FMKLSKAYQALTDDEARKNWEKYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGLYGLVFMVAL 205          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A8J6H7E9_TENMO (J domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H7E9_TENMO)

HSP 1 Score: 103 bits (256), Expect = 2.270e-19
Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 2
Query:  437 VTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            + LV+ V  +A    A+    S    E  +FDPY IL +P  A+   I+  YRRLSL  HPDK+ GN  E    F K++KAY+AL+D +AR+NWE+YG+PDG    +F +A+P W+   K+     L LYGL +M  L
Sbjct:   60 IKLVLGVGWIAFFLLAYK--VSQFDYELANFDPYEILGIPLGASQGEIKKAYRRLSLILHPDKDTGNEKE----FMKLSKAYQALTDDEARKNWEKYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGLYGLVFMVAL 190          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A2B4SZM9_STYPI (Translocation protein SEC63-like n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SZM9_STYPI)

HSP 1 Score: 104 bits (259), Expect = 4.370e-19
Identity = 55/146 (37.67%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  413 TEGKGLFNVTLVVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            ++ + +F +  V+  AVL A  +   +  S  + E   +DPY +L+L   A++  IR QYRRLS+K+HPDK+ G+    ++KF ++AKAY+AL++ ++R+NWE++G+PDG    +F +A+P WL   K+     L  YG  +M +L
Sbjct:   35 SQNRRVFAILSVI--AVLWALFFIGAYKVSQFEREFSEYDPYAVLELDRGASTADIRRQYRRLSMKYHPDKDTGD----SQKFMRIAKAYEALTNEESRKNWEEHGNPDGPGATSFGIALPSWLV-SKENSMWVLGAYGFAFMVIL 173          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: UPI000C253437 (translocation protein SEC63 homolog n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C253437)

HSP 1 Score: 100 bits (250), Expect = 4.630e-19
Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  500 SSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            S    E  +FDPY IL +P  A+ T I+  YR+LSL  HPDK+ GN  E    F K+ KAY+AL+D +ARRNWE YG+PDG    +F +A+P W+   K+     L LY L +M  L
Sbjct:   94 SQFDYEMANFDPYEILKIPLGASQTEIKKAYRKLSLILHPDKDTGNEKE----FMKLTKAYQALTDEEARRNWEIYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGLYALVFMVAL 205          
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Match: A0A3M6UI51_POCDA (J domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UI51_POCDA)

HSP 1 Score: 104 bits (259), Expect = 4.860e-19
Identity = 54/132 (40.91%), Postives = 85/132 (64.39%), Query Frame = 2
Query:  455 VAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYRRLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGYQPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVL 850
            +AVL A  +   +  S  + E   +DPY +L+L   A++  IR QYRRLS+K HPDK+ G+    ++KF ++AKAY+AL++ ++R+NWE++G+PDG    +F +A+P WL   K+     L  YGL +M +L
Sbjct:   81 IAVLWALFFIGAYKVSQFEREFAEYDPYAVLELDRGASTADIRRQYRRLSMKFHPDKDTGD----SQKFMRIAKAYEALTNEESRKNWEEHGNPDGPGATSFGIALPSWLV-SKENSMWVLGAYGLAFMVIL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig620.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L608_9PHAE4.410e-28765.50J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A835Z0Q2_9STRA1.760e-2948.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00109BD2561.550e-2038.93translocation protein SEC63 homolog n=1 Tax=Exaipt... [more]
A0A6P8HC20_ACTTE2.780e-2038.22translocation protein SEC63 homolog n=1 Tax=Actini... [more]
A0A7S1B9Q5_9STRA9.300e-2040.96Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
D6WNC7_TRICA1.880e-1941.38Translocation protein SEC63 homolog-like Protein n... [more]
A0A8J6H7E9_TENMO2.270e-1942.75J domain-containing protein n=1 Tax=Tenebrio molit... [more]
A0A2B4SZM9_STYPI4.370e-1937.67Translocation protein SEC63-like n=2 Tax=Stylophor... [more]
UPI000C2534374.630e-1946.15translocation protein SEC63 homolog n=1 Tax=Leptin... [more]
A0A3M6UI51_POCDA4.860e-1940.91J domain-containing protein n=2 Tax=Pocillopora da... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig620contigP-littoralis_Contig620:82864..90689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSY2
PFAMsDnaJ,Sec63
Model size3042
Max annot lvl2759|Eukaryota
KEGG koko:K09537,ko:K09540
KEGG TC3.A.5.8,3.A.5.9
KEGG Pathwayko03060,ko04141,map03060,map04141
Hectar predicted targeting categorysignal peptide
GOsGO:0001655,GO:0001889,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0010259,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061008,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072001,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098827
Exons9
Evalue3.22e-266
EggNOG OGsCOG5407@1|root,KOG0721@2759|Eukaryota
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-26_001850.1
DescriptionTranslocation protein SEC63
Cds size2046
COG categoryU
BRITEko00000,ko00001,ko02044,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig620.35.2prot_P-littoralis_Contig620.35.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig620 83565..90394 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791296.743483-UTR-P-littoralis_Contig620:82863..835641680791296.743483-UTR-P-littoralis_Contig620:82863..83564Pylaiella littoralis U1_48UTRP-littoralis_Contig620 82864..83564 -
1680791296.8697436-UTR-P-littoralis_Contig620:90394..906891680791296.8697436-UTR-P-littoralis_Contig620:90394..90689Pylaiella littoralis U1_48UTRP-littoralis_Contig620 90395..90689 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791296.75974-CDS-P-littoralis_Contig620:83564..837201680791296.75974-CDS-P-littoralis_Contig620:83564..83720Pylaiella littoralis U1_48CDSP-littoralis_Contig620 83565..83720 -
1680791296.7703347-CDS-P-littoralis_Contig620:84201..843401680791296.7703347-CDS-P-littoralis_Contig620:84201..84340Pylaiella littoralis U1_48CDSP-littoralis_Contig620 84202..84340 -
1680791296.78208-CDS-P-littoralis_Contig620:84844..849631680791296.78208-CDS-P-littoralis_Contig620:84844..84963Pylaiella littoralis U1_48CDSP-littoralis_Contig620 84845..84963 -
1680791296.7916188-CDS-P-littoralis_Contig620:86480..874581680791296.7916188-CDS-P-littoralis_Contig620:86480..87458Pylaiella littoralis U1_48CDSP-littoralis_Contig620 86481..87458 -
1680791296.803569-CDS-P-littoralis_Contig620:87976..880841680791296.803569-CDS-P-littoralis_Contig620:87976..88084Pylaiella littoralis U1_48CDSP-littoralis_Contig620 87977..88084 -
1680791296.8134198-CDS-P-littoralis_Contig620:88572..887281680791296.8134198-CDS-P-littoralis_Contig620:88572..88728Pylaiella littoralis U1_48CDSP-littoralis_Contig620 88573..88728 -
1680791296.8256006-CDS-P-littoralis_Contig620:89175..893191680791296.8256006-CDS-P-littoralis_Contig620:89175..89319Pylaiella littoralis U1_48CDSP-littoralis_Contig620 89176..89319 -
1680791296.8422654-CDS-P-littoralis_Contig620:89595..896591680791296.8422654-CDS-P-littoralis_Contig620:89595..89659Pylaiella littoralis U1_48CDSP-littoralis_Contig620 89596..89659 -
1680791296.856164-CDS-P-littoralis_Contig620:90212..903941680791296.856164-CDS-P-littoralis_Contig620:90212..90394Pylaiella littoralis U1_48CDSP-littoralis_Contig620 90213..90394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig620.35.2

>prot_P-littoralis_Contig620.35.2 ID=prot_P-littoralis_Contig620.35.2|Name=mRNA_P-littoralis_Contig620.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=682bp
MSGNSVYAAGLGLLIPLVGTSVCRKLWNHGLLRVRGRTTTEGKGLFNVTL
VVQVAVLAASCYAFHHVASSMKMEPEHFDPYHILDLPARANSTVIRSQYR
RLSLKHHPDKNPGNRSEANKKFNKVAKAYKALSDPQARRNWEQYGHPDGY
QPWTFDLAVPGWLRPGKDTGNGTLALYGLCYMAVLIGFVVSVKVILDMMD
PAGGNKKPQFEVTEEDVDALLENLDDSSSTADVLECLAASPQLCSEERRV
LAEDMEPITAPLRQWLLNLEGGAPPLRGPRPCPPTQPSAGQGAAPPNKAT
ARRGKGKGSTKGKSKGGDGGAGEPATSTAAAATKKKEEEVEVEGEFFSRG
RKGEGNRRSARESPELSGVVKHNLVVLLSALHRAPSSCVVDTGDDGDGGG
GGAGAASGVVASAAEAGEADEDDSCQEASRKAGGTVAKRERTEGGGHGDG
AEDGAGAESRLLAAVDAGGQLARERDRVVGLAEPLLDACLRVAARRPSPQ
LFGTVVETKAMLRRRLWSSQDPSATDRQQEEADMELDAAVPSIKVKSVVV
ETWGESQVALGDTVTATITIVREHAPEYQGFRRRRPEAGSFLAKGEPWWV
ILAGGKDGGSLIGVAPMLVDNLSNGVAECKMKFQAPTRPGFVNLTVSVKS
PVFVGVDCEGSASFRVWRHDELKEDEDAGDW*
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mRNA from alignment at P-littoralis_Contig620:82864..90689-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig620.35.2 ID=mRNA_P-littoralis_Contig620.35.2|Name=mRNA_P-littoralis_Contig620.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7826bp|location=Sequence derived from alignment at P-littoralis_Contig620:82864..90689- (Pylaiella littoralis U1_48)
GCCAGATCTGTACAACAGCAGTACCACCGCCGTCTGCTGTTGTTTCTCAG TGCCTGCGCGTGTGTCAAGCGTTCTTGACGTCCTTCAAATAGTGCCGTTG AGAGCACTGTAGCGTGTCGCTCTTCGTCCTCTAGAAAGAGAGATCAACAA AGTCCAGCAAGTTTGGAACTCCATCAAGAGAACAACGCGCTTGCCAGAGC CGCAGACTCTCCACCGCCAAGCTACGTTGCTTGTAGGGTGGCTGGCTCGT GGCTAGCCCCATATTGGCCGCTGCTGTCTGTGGCTGCAACATACCATGAG TGGCAATTCCGTGTATGCTGCGGGCTTGGGTTTACTTATCCCGCTTGTGG GAACCTCTGTTTGCCGGAAGCTGTGGAACCATGGACTTCTGCGGGTGAGG GGACGAACGACAACGGAGGGCAAGGGTTTGTTCAACGTCACCCTCGTCGT TCAGGTGGCGGTCTTGGCAGCTTCTTGGTGAGTGAGGGCGTATGGCGTGT GTGAGTTTTGTGGATGTACATATGTGTTCATTATTCCGGTGTCAGAGAGT CACCTGCATGTGTACCGTTTTTGTTTTTGCTATTCTCCTTTCCGACAGCA AGTATGCTTGTACTCGCCACCAAACGACGTTTTCGACACCGAATATCGTA CACTTCTGTACCCTCCTCGGGTATCAGGTGTCGCGGTATCTCGCTGGACA CCACTAGGCTGTCCACGCCCTAGAAGCAGCAGTTGTTTTTTCCCGATTGT CGTATTGTTGCCTCGTTGATCGAGCTCTGGTACACCGGCTGCTGCATGTG TGCCTCTGCTCTGCTGTTTGTGTGTCACGCAACTTTCTCCAGCGTATGAT TCCTCTTCCGTCCTTTGTTCCAAATCTCACCGCATTTTTCAATCGTATAA TAACGGCTCACGGCCTGCAGCCTCTCTGCGTGGTGCATGATGTGGTCCAT GTAGTACGACGGCGGTACAACACGCATCATGACATCATAACTTGTTTGTG GCTTCCTTTCTTGTCCTGCGACATGTCCAGCTACGCCTTCCACCATGTGG CCTCCTCGATGAAGATGGAACCGGAGCACTTCGACCCCTATCACGTACGT TCTGCCCAAACGTCGATCGCGTACCTATGTTCGTATCAGACAACAGCAGT AGTGCTGAACATGGGCCTGCCTGTCCAGCAATTTGTCACGAAGGGGTTTG CTGCCATGTTTTTAAATGTCTGCTCCCACGTAGTGATTGATTGAATACAC GCCCCTCGTCCTCCCCATCCGTAGCGGAAAGACGGCAGAGGACAATCGTG TCGAAACATTTGTCATGTCTTGAGCGCGATGGTTCGATACAAATGGCCAT CTGCTCGTCTCAATTTCCAGATACTGGACCTGCCAGCTAGAGCCAACTCT ACCGTCATCAGGTCACAATACCGACGCCTCTCCCTGAAGCATCACCCCGA CAAGAACCCGGGCAACAGGAGCGAGGCCAACAAGAAGTTCAACAAAGTCG CCAAGGCATACAAAGTGAGAGGGCGCAAAATAACACAAACGTGAGAGGTC TCGGTGACCTGTGGTCCGGACCGTTAGTTGACGCCCCTCAACGTCTGTTT TGATTCAACCTCGAAGGCCTCGCAGCAAGTAGTTATAAAGAGGTGGTCAC TTTCAGCTCAGACCCTTGGTGCAGGGAGATAAGTTCTCGCACCGTCGTGC TGCGTAGCGCCGTCGGCATATCGCTCGCATGCCTGCGGTGCACAAGTGTT GTAGACTAAACCTCATGTCCCCATGATGGAAAGTAAGTACTTGCTGAGGG TATTTGTCTTTTTCTATCCATATGTATCGCATCCGTTTTTGTTCCGGTTG TTCTGGTCTATGCTTCGTTGACGTCGCGTGCTACTGATGGTGGTCTTTTA TTCTTGTTTTTGTCTCTGCGTGCTGATGGTGGCCCCTTCTCACGGCGGCA TCGCCAAACAGGCTCTCAGTGATCCGCAGGCGAGACGGAACTGGGAGCAG TACGGTCACCCCGACGGATACCAACCGTGGACCTTTGATCTGGCCGTTCC TGGCTGGCTGCGGCCAGGCAAAGACACTGGAAATGGGACGCTGGCACTCT ACGGGCTGTGTTACATGGTCAGTGACATAATTCGTACGACATAAGTTTCT CACAACCACGTGCGAGTCGGGTGGTTACCGGCGGAATGCTGCCGCGACGT TGGGTGCAGCAGTGCAATTTGTCAGTCTTCGCGATGGTGCTTGAACACCG AAAGCTGCACGATAGTTCCCCAAGCAGTACGTTTTTGTGGCATACACTTC CGCTTCGTGGAGACAGCCTGTCTAAAGGGGGCATTCTGCGGTTTCTTTCT GTCTTTTAGTTGCGCGCGAAACTGCCCCGCCTTATCTGCTAGCAGCTTGT TTTTTTCCGGTGCACAAACACGACGTTTCCTGTCTCCATTCACCTTGGGG GCTCCCCACATGCGCGATCACCGTCCCTCGAAACTGACGTCAATACTGCT TGCTGTACACTGGCTTATGTGGCTGTTTTGGTTTCTGACCAGTGTAATCT CATTGTTTTCTCCACCTCCATCAAATCAAAATCTCAATAACTACCCTTTT TGCAGGCTGTGCTGATCGGCTTCGTGGTGAGCGTCAAGGTAATCTTGGAC ATGATGGACCCTGCCGGGGGGAACAAGAAGCCGCAGTTCGAGGTCACAGA GGAAGACGTCGATGTGGGTTTCAGGCTTTGTTGCCCCCGTTTGAGGCTCA CGCTCGTTTGGCAACTACGTCGTAATTACGTAATTACGAAGTGACATGCA ATTTCATGCGGTATTGGTTCGGTGCCATCACTGAACGCTCGAACACGTTT GACAACTAAACGTGTTGCAATATACGATAGAACGTGCGATATTTGCTGCG GTGCCCCCACTGAACGCTCGCACACGTGTGGTGACCACCATGTACGTCAC GGTAAATCTGTACTTGAAAAATGAACGGCCGTCTCTCGCTGCTGCGCGCC ACATTTATTTTGTGTACAGCTGTAGTGGCACCTCCAACAATGGCCCCCAC CTTACGCAAGCCTCTTTTGTGTCGAGCAATCACTGCACTGCAGTTTTCAA TAGAAACTCGAAGTAGATGCCATCGACGGTGGCCCCCAATCTTGGGTAAG GAATACTTCGCCAGGCGGGTGACATCTGTTATGCCCGTTTCGTTTTTTTT GTCCACATATTATACCTTTCGAGATCACTAGGCCTTGCTTGAGAACTTGG ACGACTCTAGCTCGACGGCCGACGTGCTGGAGTGTCTCGCCGCCTCCCCA CAGCTCTGCTCGGAAGAACGCCGAGTCCTGGCGGAAGACATGGAACCCAT CACGGCTCCCCTCCGACAGTGGCTGCTCAACCTCGAAGGCGGGGCTCCTC CGCTGCGCGGCCCCCGTCCGTGTCCCCCCACCCAGCCGTCTGCTGGACAG GGAGCAGCGCCTCCTAACAAAGCAACCGCAAGGAGAGGGAAGGGAAAGGG CTCTACCAAGGGCAAGAGTAAAGGCGGCGATGGCGGCGCCGGGGAACCGG CCACATCTACAGCAGCTGCTGCCACGAAGAAGAAGGAGGAGGAGGTGGAG GTGGAGGGAGAGTTCTTCAGCCGGGGGAGAAAGGGGGAAGGAAACCGGCG AAGCGCCCGCGAGAGCCCCGAGCTCTCCGGGGTGGTGAAGCACAACCTGG TGGTGCTTCTGAGCGCCCTCCACCGGGCGCCGTCGTCCTGTGTCGTTGAT ACTGGTGATGATGGCGATGGTGGTGGTGGTGGCGCTGGCGCCGCAAGTGG TGTTGTCGCCTCGGCGGCAGAAGCAGGCGAAGCCGACGAAGACGATTCGT GCCAGGAGGCGTCACGGAAGGCTGGCGGCACCGTGGCAAAACGAGAACGA ACGGAAGGGGGAGGTCACGGCGACGGTGCCGAAGACGGTGCCGGTGCCGA GTCTCGGCTGCTTGCGGCTGTGGATGCGGGTGGACAGCTGGCTCGGGAGA GGGATAGGGTGGTCGGGCTCGCGGAACCGCTGCTCGACGCCTGCTTGCGC GTGGCGGCGAGGCGACCGTCCCCGCAGCTGTTCGGTACGGTAGTGGAGAC AAAAGCCATGCTGAGGCGTCGCCTGTGGTCTTCGCAGGACCCCTCAGCTA CCGACAGGCAGCAGGAGGAGGCGGATATGGAATTGGATGCTGCAGTGCCT AGCATCAAGGTGTGCTCACTAAATGTGGTCGTGGGCGGGCGCTATCGATA CTGTACCATTGTATTTCCATTTGCTCCGTCGGTTATTTGTTCATGTCTTT TTTTTTAGAAAATATTAAGTCTCAAGCGCACGTTTCTGCGAAGGGAGTCT TGTCGTCATGTTTTATCGTAACGCTGCCAGGCCGGGTTGTTTCTTGTTTT CAGTACGTTCGTCGTGTCGAAAACTCTACACCCACAATCTATGCTCATTA GGGATCTGGGTCACAGGTTGCTGTTGGCTGCTCACCGACTTTTTTAAAAT ATTATGGCAACAGTTGAATTTTACTTGACGTCAGACTTGCGACCGCGTGC CTTTACTTGGCAACACGCACATGAAAATCTCCCTCCACTTATTTGGAGCC TACCCCCAGAAGTCACAAAACAGCAGAAGAATTCTCGCTATATCGGACTT CGTACTTGGGGCGGGTATTAGATAAAAAAAAGTGCCTGGAACGTGGAACG TTGAACTTCGAATTCCTCTCATTGGCCAACAATAAAAACAAATTTTTCTG GAAATGCTGCCGCCGTCGGAGTTCCCTTTTTGTCGTTCCCTCCGCTCAAC TAATTTTTAATCATCTCGTTCCTTAAAATTGCCCAAAAGCTCACATGGAA CGGGCTGCAGGGGAGGAATAAGCTTCTGATACCAGAAAGCGCGTTCTTTC TCTCTGACAACAACCAACCCCAGAACACACATAGATGGGCAGAGGAGACA GAGACACGCACATGCACGCAGCTCCCCTCACCCTCACCGAACACCGCCTT GCGCCATGCGTGGAATATTGAGCCCTCTCATGTCTGATGACTCAAGTCAC CGTCCAGCAGCGGCAGCAGCGGCAGCAGCGGCAGCGCAGCACAGCAAACA AAAAGCTACAAACACAGCAGCACGGCAGTCGTCATACATACCTTGTTCAT CCACGTCCTTTCATTTTGTGCATCCACTTTTTGTTCAAGAGAGCCCCCAC GACTGCTTGCTGCTCTGGCCGGTCTAAGAAAAACCAGTTACCATGGGTTG CTCTGCTGTGTGTGTCCTATGTGTGTGTGTGTATGTTCTGCGTGCTCTGC CACCTTTACTTTGCGAGATAAAGCAGTGCACGTGCGTGTGTACGTGCTTG CGGTGCTGAAAGGAAGAATAATAAACTACCAATACCTCAACGGCCGCGCA CGACAGCAGCAGGGTCCCTAGGGCTTGTCGCCAAATTCAGGTTCCATGTT TTCGATGTTCCAGCGTACATTTTTCATCGTAGATACGAAGCAAGGAACAA AGAACGAGGGATCCAGAGTTCCTCGTTTCATGTTCCATGCGTCTTTTTTA TCTCATACCCGCCCTTGGTATATACTTGAAGTATTTCGTAGTTTCTGTTT TTCGACGAATGATATCGTCTTACAAATCATGCTGTAGTTTTAGCCACACG CTAGCAGCTTTCATGCTCTTTTACTTATCGAATTCCGTTTTCTTCCTCCC GCTGTGCGCTTGCGCCACCCGTCCAGGTGAAGAGTGTGGTCGTAGAGACC TGGGGAGAGAGCCAGGTAGCGTTAGGAGATACGGTGACGGCCACCATCAC CATCGTGCGGGAGCACGCGCCGGAGTACCAAGGGTTCCGCCGCAGGTGCC CACCCCCCCCACCCCCCCACCCCCTCCGCCCCTCCACCTGCTTTTACAAA AGGAACACTCGTTTCAATCGTTTCGGTAGCTCACCCGTGCAGTACGCGCA GAAAAGCAGTGCCCGAAAAATGGAATAGGTAGTTTTGTATCGTCCCCGTC TATCCAGGGTGTGTGTGCGTGTGTGTGTGTGTGTTGTGTTGATGTTTTTG TCAACAGCGTTATTTTACACCCGCCACCCACGCAGCAAACGTTTTGTGCC CCCCTGAATGTATGTCGCGTATTCTGCGCCACAAGCTGGGTTGGTCGCGT ACTACTCCGTATTTCATACGTATTCGGAGTTCGCCAAAGTTCGGTGGGAG GTTATCTACCCCTTTTCTTATACCACCGCCGCTCCGGCCTGTTTCGATTC GTGTCGTTCTTTTTTATCGTAACGGGCTGTTCGTGGTGTTTGTGCATGCC TTGCTCTCGTCTCGTGGTGATACGTTTTTGCGCGATGACGTCATCACAGG AGACCGGAGGCCGGGTCGTTCCTCGCCAAGGGGGAGCCGTGGTGGGTCAT TCTCGCGGGTGGGAAGGATGGAGGCTCGCTGATCGGAGTAGCCCCCATGC TCGTGGATAACTTATCCAACGGCGTCGCAGAGTGCAAGGTACGAGCAGCG CAGCCGTGGGCGAAAACGCAGTACAAGTATATACCGCTCGTTTTTCTGTC TTGTTTTCTCCGGTTCTATGTCTTGCGCGTCTCCGTAACTTTCGTGCTCG CGAATTAGTCTATCTACGGCTCTTTTTGCCTTCCCCCCCCGCCCCGCTTG GATCTCCGTCTTCAGTTCGTGTTCTCCGCGTAGTATCCAAAGCTTCGGGG GCGCCTCGTGAGACTCTGATGGTTTTTGGCGCTCAAACGCATGTTGTTCC CCTCCACCTTCTCACGTTTCGTTCGGCCCTTGTGTGTGATGGTGTGAAGG TGCGTGTACCTCCAGTACACGACATCGAGCCGCTGAAATATATCGCACCT TTCTCGACTGCTCGCATGTCTCACGTGTTCTGCCGTTGACGTTGCGTCGT TGTTGCGTAACTCCGGTGCGTGCGTGTGTGCGTGCGTGTGTGTTGTGTTT GTGTCCGTATGCTTTTCAGATGAAATTCCAAGCGCCAACGCGCCCGGGCT TTGTGAACCTGACGGTCAGCGTTAAGAGCCCGGTTTTCGTTGGCGTGGAC TGTGAGGGTTCTGCGAGCTTCAGGGTCTGGAGGCATGACGAGCTCAAGGA AGACGAAGATGCCGGCGATTGGTAGTACTGCTGTGGTGGAACGCTCTCGA CACTGGTCGAAAACACAGGCACTCTGATTTTATTTACAAGTGTTTGCGTT CTACCTTTCAATATGACGCGAATGATTTTTTTCAACACGAAAAAGTACTT CGAAGTACCGTAAACTACGGAGTTTTCCTCCCGGAGGGGCCCCCGGAGGG GGGATTTTTTTTTTGGTTGAAATCAAACCCCCCGGGGGGAAATTGACGTA CCGGGGGGGTTTGGTTGTTTTCTTTTTTTCCATGCTACCCCGGGGGGTGT CTACCCGGGGTTGTGCAAAGAATGGTGGTCCACACACACACACACACACA CACACACACAGCAGTTGCCGACCGTGATGGGTAAGGTTTACGAGCAAGCG TACAAGCGGCAGAAAGGCCCGGAAAAGAACAAGAGCACAGAATGTGAAGA GAATGAAGAGAGCAATAAAAAACCAAGCGCGTAGGTGCCCTAGAAACAAC CTGGAATGCCAATTGGCCGCGGTACAACACATATCTCGCTCGAAGCGCAG AGGTGGCGATTAATTTTCTGTACCCCTGTCATGCTTTTGTCCTTCGCCAT TCAAAAAAACGACTCAAGCACAAGCGCAAATACATCCCCCCCGGGGGAAC TCGTGAAAAAAATTGTACGATCTACCCCAGGGGGAAATCAAAGAATACAT GGTGGCAGGCTGAAAAGGTGATGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig620:82864..90689-

>mRNA_P-littoralis_Contig620.35.2 ID=mRNA_P-littoralis_Contig620.35.2|Name=mRNA_P-littoralis_Contig620.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2046bp|location=Sequence derived from alignment at P-littoralis_Contig620:82864..90689- (Pylaiella littoralis U1_48)
ATGAGTGGCAATTCCGTGTATGCTGCGGGCTTGGGTTTACTTATCCCGCT
TGTGGGAACCTCTGTTTGCCGGAAGCTGTGGAACCATGGACTTCTGCGGG
TGAGGGGACGAACGACAACGGAGGGCAAGGGTTTGTTCAACGTCACCCTC
GTCGTTCAGGTGGCGGTCTTGGCAGCTTCTTGCTACGCCTTCCACCATGT
GGCCTCCTCGATGAAGATGGAACCGGAGCACTTCGACCCCTATCACATAC
TGGACCTGCCAGCTAGAGCCAACTCTACCGTCATCAGGTCACAATACCGA
CGCCTCTCCCTGAAGCATCACCCCGACAAGAACCCGGGCAACAGGAGCGA
GGCCAACAAGAAGTTCAACAAAGTCGCCAAGGCATACAAAGCTCTCAGTG
ATCCGCAGGCGAGACGGAACTGGGAGCAGTACGGTCACCCCGACGGATAC
CAACCGTGGACCTTTGATCTGGCCGTTCCTGGCTGGCTGCGGCCAGGCAA
AGACACTGGAAATGGGACGCTGGCACTCTACGGGCTGTGTTACATGGCTG
TGCTGATCGGCTTCGTGGTGAGCGTCAAGGTAATCTTGGACATGATGGAC
CCTGCCGGGGGGAACAAGAAGCCGCAGTTCGAGGTCACAGAGGAAGACGT
CGATGCCTTGCTTGAGAACTTGGACGACTCTAGCTCGACGGCCGACGTGC
TGGAGTGTCTCGCCGCCTCCCCACAGCTCTGCTCGGAAGAACGCCGAGTC
CTGGCGGAAGACATGGAACCCATCACGGCTCCCCTCCGACAGTGGCTGCT
CAACCTCGAAGGCGGGGCTCCTCCGCTGCGCGGCCCCCGTCCGTGTCCCC
CCACCCAGCCGTCTGCTGGACAGGGAGCAGCGCCTCCTAACAAAGCAACC
GCAAGGAGAGGGAAGGGAAAGGGCTCTACCAAGGGCAAGAGTAAAGGCGG
CGATGGCGGCGCCGGGGAACCGGCCACATCTACAGCAGCTGCTGCCACGA
AGAAGAAGGAGGAGGAGGTGGAGGTGGAGGGAGAGTTCTTCAGCCGGGGG
AGAAAGGGGGAAGGAAACCGGCGAAGCGCCCGCGAGAGCCCCGAGCTCTC
CGGGGTGGTGAAGCACAACCTGGTGGTGCTTCTGAGCGCCCTCCACCGGG
CGCCGTCGTCCTGTGTCGTTGATACTGGTGATGATGGCGATGGTGGTGGT
GGTGGCGCTGGCGCCGCAAGTGGTGTTGTCGCCTCGGCGGCAGAAGCAGG
CGAAGCCGACGAAGACGATTCGTGCCAGGAGGCGTCACGGAAGGCTGGCG
GCACCGTGGCAAAACGAGAACGAACGGAAGGGGGAGGTCACGGCGACGGT
GCCGAAGACGGTGCCGGTGCCGAGTCTCGGCTGCTTGCGGCTGTGGATGC
GGGTGGACAGCTGGCTCGGGAGAGGGATAGGGTGGTCGGGCTCGCGGAAC
CGCTGCTCGACGCCTGCTTGCGCGTGGCGGCGAGGCGACCGTCCCCGCAG
CTGTTCGGTACGGTAGTGGAGACAAAAGCCATGCTGAGGCGTCGCCTGTG
GTCTTCGCAGGACCCCTCAGCTACCGACAGGCAGCAGGAGGAGGCGGATA
TGGAATTGGATGCTGCAGTGCCTAGCATCAAGGTGAAGAGTGTGGTCGTA
GAGACCTGGGGAGAGAGCCAGGTAGCGTTAGGAGATACGGTGACGGCCAC
CATCACCATCGTGCGGGAGCACGCGCCGGAGTACCAAGGGTTCCGCCGCA
GGAGACCGGAGGCCGGGTCGTTCCTCGCCAAGGGGGAGCCGTGGTGGGTC
ATTCTCGCGGGTGGGAAGGATGGAGGCTCGCTGATCGGAGTAGCCCCCAT
GCTCGTGGATAACTTATCCAACGGCGTCGCAGAGTGCAAGATGAAATTCC
AAGCGCCAACGCGCCCGGGCTTTGTGAACCTGACGGTCAGCGTTAAGAGC
CCGGTTTTCGTTGGCGTGGACTGTGAGGGTTCTGCGAGCTTCAGGGTCTG
GAGGCATGACGAGCTCAAGGAAGACGAAGATGCCGGCGATTGGTAG
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