prot_P-littoralis_Contig620.31.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig620.31.3
Unique Nameprot_P-littoralis_Contig620.31.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length550
Homology
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BLAST of mRNA_P-littoralis_Contig620.31.3 vs. uniprot
Match: D7FUM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM2_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.090e-24
Identity = 52/65 (80.00%), Postives = 59/65 (90.77%), Query Frame = 0 
Query:  338 VGGGTGPYRNDSAFETVEMLLPGAEAWVAGPSMGEARCGLGATALADGKIVAVGGYGGDLVYRNS 402
            +GGGTGPYRNDSAFETVE+L PGA+ WVAGPSM +ARCG+G TAL DGK+ AVGGYGGDLVYR+S
Sbjct:    1 MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTALPDGKVFAVGGYGGDLVYRSS 65
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig620.31.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUM2_ECTSI2.090e-2480.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 435..482
e-value: 7.0E-6
score: 35.5
coord: 386..433
e-value: 1.1E-9
score: 48.2
coord: 334..384
e-value: 2.0E-5
score: 34.0
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 428..468
e-value: 8.5E-7
score: 28.5
coord: 379..420
e-value: 2.9E-6
score: 26.8
IPR037293Galactose oxidase, central domain superfamilyGENE3D2.130.10.80coord: 95..247
e-value: 1.5E-8
score: 36.5
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 286..520
e-value: 2.3E-34
score: 120.7
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 308..488
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 149..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR24412KELCH PROTEINcoord: 311..442
coord: 350..492
NoneNo IPR availablePANTHERPTHR24412:SF75KELCH-LIKE PROTEIN 1coord: 311..442
NoneNo IPR availablePANTHERPTHR24412:SF75KELCH-LIKE PROTEIN 1coord: 350..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig620contigP-littoralis_Contig620:61197..81119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig620.31.3mRNA_P-littoralis_Contig620.31.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig620 60144..81457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig620.31.3 ID=prot_P-littoralis_Contig620.31.3|Name=mRNA_P-littoralis_Contig620.31.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp
MPDPSHRGCEHDMERKSQNDNIMTATPGATAVGAAGASCGKNRCSGRCRR
ASQVEERREGRGDSGLPVPPEVMSLVLLCTDGATLSHASYVSKALHALVT
VKHWESAARRAVWLQKPTPASASFKSREEATGYWRRWSKLAAGAPGTPSG
RLVVVGGNEIPTVEASGKTEAFLDVRYGETLTWKALPSLEVPRSAAGTAV
DRFGSLVTLGGWDNEGALNSCECLAHPPAAAAATLRQRQQQQQRRRPLIA
NACSETVGKNAGSSSPSFGGSSSAAAAVAARVRTSNNGEAASTGASSATG
ETVVPAAEDWRWKALPPLQRRRCFLGAAFEPRGALLAVGGGTGPYRNDSA
FETVEMLLPGAEAWVAGPSMGEARCGLGATALADGKIVAVGGYGGDLVYR
NSAEVLDPYAERWTALAPMQRRRTGVAVAVGPGGRLYAVGGSADGSHGLS
SVETLDPREGKWGSSPPMIFGRAYCCASFAASGCFVSGPGTGKGWSQTHA
WLSSLESLFLEEGVVHSSQVLVLLLFLLMFMRMLLKILSVVFYSFLLWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR037293Gal_Oxidase_central_sf
IPR015915Kelch-typ_b-propeller