prot_P-littoralis_Contig620.28.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig620.28.2
Unique Nameprot_P-littoralis_Contig620.28.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length435
Homology
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BLAST of mRNA_P-littoralis_Contig620.28.2 vs. uniprot
Match: D7FUM4_ECTSI (HTH_OrfB_IS605 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM4_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 2.540e-152
Identity = 265/397 (66.75%), Postives = 295/397 (74.31%), Query Frame = 0 
Query:   46 QSLDEFWQEPWTQSTWMSTLSQNPAAQGLHPASWMYPSNPSRHDSMDFDFGTCFSQSSSEGLPSPGSSPLNNQPCKGGSTAXXXXXXXXAGARAGGGSGIPQLVEHXXXXXXXXXXXXXXXXXXX--TLPMTPPPGLSDERFGRFAAGANPSGGSGT------HAYQSSPSPYLGAMGARAGTSRSSSVDSDSSSVHGVYGGSIASSAAGAASGPYAFQISGYNTVELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDPSSSAMTLRAAVAESESEHEWASAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGEIITAEPIGTAAQNKALKYRTRKDRLEQIVLRADGFRHGIPYPDYFGHAPLSTSAPIPEILPSDAILVRSTERFYLCIPESC 434
            + LD+FWQEPW Q TW+ST+SQNPAAQGL P+ WMY S+P + DS+DFD G+ FSQ+SSE  PSPGS PLN+   K GSTA             G G    Q +EHXXXXXXXXXX           TLPMTPPPGL+ ERF   AA                H    S S  L  MGAR+GTSRSSSV+SD+S    +YGG+           P AFQI GY T+ELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVD S SA +LRAAVAESESEHEWA+AVPLAIRDATVAQLVGALHLAQRSAEVAAAATGE + AEP+GTAAQNKALKYRTRKDRLEQIVLRADGF++GIPYPDYFG+APL++S PIP+ LPSDAILVRSTERFYLCI E+C
Sbjct:    9 RGLDDFWQEPWAQDTWVSTISQNPAAQGLQPSGWMYTSHPGKQDSLDFDLGSSFSQASSEDPPSPGSPPLNHGQWKRGSTASTASSCGSISVSGGAGH---QPIEHXXXXXXXXXXAPIASTASLSSTLPMTPPPGLAHERFVHPAAAXXXXXXXXXXXXXXPHXXXXSQS-LLATMGARSGTSRSSSVESDTSPALSLYGGAXXXXXXXXXXXPCAFQILGYQTLELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDSSVSATSLRAAVAESESEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGEAVMAEPLGTAAQNKALKYRTRKDRLEQIVLRADGFQYGIPYPDYFGYAPLASSVPIPDRLPSDAILVRSTERFYLCIREAC 401
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig620.28.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUM4_ECTSI2.540e-15266.75HTH_OrfB_IS605 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021027Transposase, putative, helix-turn-helix domainPFAMPF12323HTH_OrfB_IS605coord: 263..290
e-value: 6.3E-7
score: 28.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig620contigP-littoralis_Contig620:52560..57006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig620.28.2mRNA_P-littoralis_Contig620.28.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig620 52534..57290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig620.28.2 ID=prot_P-littoralis_Contig620.28.2|Name=mRNA_P-littoralis_Contig620.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=435bp
MMNSRSASTDERQQQQQQQQQQQQQYHHHQQHQQQPQRHQQQQQTQSLDE
FWQEPWTQSTWMSTLSQNPAAQGLHPASWMYPSNPSRHDSMDFDFGTCFS
QSSSEGLPSPGSSPLNNQPCKGGSTAGTSTAGTSAGARAGGGSGIPQLVE
HHHHYYHHHSAPSRTMSSSSTLPMTPPPGLSDERFGRFAAGANPSGGSGT
HAYQSSPSPYLGAMGARAGTSRSSSVDSDSSSVHGVYGGSIASSAAGAAS
GPYAFQISGYNTVELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDPSSS
AMTLRAAVAESESEHEWASAVPLAIRDATVAQLVGALHLAQRSAEVAAAA
TGEIITAEPIGTAAQNKALKYRTRKDRLEQIVLRADGFRHGIPYPDYFGH
APLSTSAPIPEILPSDAILVRSTERFYLCIPESC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021027Transposase_put_HTH