prot_P-littoralis_Contig62.180.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig62.180.1
Unique Nameprot_P-littoralis_Contig62.180.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length263
Homology
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 4.770e-144
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHL T+ QPATGEGGDG KMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSD IVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVD+FCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWG+SIVAAGNDGQV
Sbjct:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQV 224          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 1.540e-124
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0
Query:   66 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDS RLAVAQSD IVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVD+FCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWG+SIVAAGNDGQV
Sbjct:    2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQV 183          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 323 bits (828), Expect = 2.120e-102
Identity = 157/225 (69.78%), Postives = 179/225 (79.56%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHL TV  P  GEGG  + + KV A+AWAPNNRKLAVCTADRVV L+DENGEKRD+FSTKPA+KGPKNY+VR +                  FVYKLG EWGE KSICNKFPQPSP+T ++W +ARPN++VFGLA+GKVKIGQL++NKPATLYN D+F AALA S DGNGVVSAHADG +YRFLFDD+G  PSH +L +HP VPYALSWG SIVAAGND QV
Sbjct:    1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQV 223          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A1V9ZC42_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA)

HSP 1 Score: 295 bits (756), Expect = 5.060e-88
Identity = 141/228 (61.84%), Postives = 179/228 (78.51%), Query Frame = 0
Query:   22 IVMQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            ++MQLRHL+TV  P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG KNY+VR L FSPDS++LAVAQSD IVF+YKLGLEWG+ KSICNKF Q S +T M WP A PNE+VFGLA+GKVK+GQL+SNKPATLY+  ++ A + T+P+G  ++S+H D ++YRF+FDD NG  + TK+ +H  VPYALSWG SIVAAGND +V
Sbjct:  976 LLMQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKV 1196          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A6A4ZTU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA)

HSP 1 Score: 274 bits (700), Expect = 8.770e-88
Identity = 136/239 (56.90%), Postives = 175/239 (73.22%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEK-------------GPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHL+TV  P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEK             G KNY+V+ L FSPDS++LAVAQSD IVF+YKLGL+WG+ KSICNKF Q + +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   ++ + L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +V
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKV 232          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)

HSP 1 Score: 288 bits (738), Expect = 1.260e-85
Identity = 139/226 (61.50%), Postives = 177/226 (78.32%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYD-ENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHLT++ Q   G       M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K+YIVR L FSPDS +LAVAQSD I+FVYK+GLE+G+ KSICNKFPQ S +T ++WP   PNE+VFGLA+GKVKIG L+SNKPATLY   ++ + + ++PDG  ++SAH DG +YRF+FDD  G P+H KLV+H  +PYALSWG SIVAAGND +V
Sbjct:    1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRV 219          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A813BFQ9_9DINO (IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO)

HSP 1 Score: 271 bits (694), Expect = 1.290e-85
Identity = 123/203 (60.59%), Postives = 162/203 (79.80%), Query Frame = 0
Query:   46 MSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K  K+Y++  + FSPDS++LAVAQSD IVFVYKLGLEWG+ K+ICNKF Q S +T ++WP+A PNEV FGL +GKVKIGQL++NK ATLY  D+F  ++ +SPDG+ ++S H DG++YRF F + G  P+  K  +H +VPYALSWG S++AAGND +V
Sbjct:    1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKV 203          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 287 bits (735), Expect = 3.190e-85
Identity = 139/226 (61.50%), Postives = 182/226 (80.53%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYD-ENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHLT++  PAT EG     M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG KNYIVR+L FSPDS++LAVAQSD IVF+YK+GL+WG+ KSICNKFPQ + IT ++WP   PNE+VFGLA+GKVKIGQL+SNKPATLY   ++ + + ++ +G  ++S H DG+++RF+FDD  G P++TK+ +H  VPYALSWG SIVAAGND +V
Sbjct:    1 MQLRHLTSLL-PAT-EG-----MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRV 219          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.770e-85
Identity = 136/226 (60.18%), Postives = 175/226 (77.43%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHL+TV  P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG KNY+V+ L FSPDS++LAVAQSD IVF+YKLGL+WG+ KSICNKF Q + +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   ++ + L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +V
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKV 219          
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Match: A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)

HSP 1 Score: 270 bits (689), Expect = 1.370e-84
Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 0
Query:   24 MQLRHLTTVTQPATGEGGDGVKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAE-KGPKNYIVRDLCFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNV--DTFCAALATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 247
            MQLRHL     P  G       +SKV  + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+  G KNY+VR + FSPDS++LA+ QSD IVFVYKLG EWG+ KSICNKF Q S ITC++WP  + +EVVFGLAEGKVK+GQL+SNKPATLY     ++  +L +SPDG  ++S H DGT+YRF FDD    PS++KL  HP VPYALSWG SI  AG+D +V
Sbjct:    1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKV 221          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB7_ECTSI4.770e-14496.43Intraflagellar transport protein 172 n=1 Tax=Ectoc... [more]
A0A6H5KMU1_9PHAE1.540e-12496.70Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YVD3_9STRA2.120e-10269.78Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A1V9ZC42_9STRA5.060e-8861.84Intraflagellar Transport Protein n=1 Tax=Thraustot... [more]
A0A6A4ZTU4_9STRA8.770e-8856.90Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A0P1AMT9_PLAHL1.260e-8561.50Intraflagellar transport protein 172 n=1 Tax=Plasm... [more]
A0A813BFQ9_9DINO1.290e-8560.59IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A8K1FJC7_PYTOL3.190e-8561.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A397EVR2_9STRA4.770e-8560.18Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A7S0RE83_9CHLO1.370e-8457.89Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 171..210
e-value: 39.0
score: 7.0
coord: 130..169
e-value: 420.0
score: 0.5
coord: 31..74
e-value: 0.12
score: 21.5
coord: 76..122
e-value: 1.5
score: 15.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 95..121
e-value: 0.25
score: 12.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 28..249
e-value: 6.3E-22
score: 79.8
NoneNo IPR availablePANTHERPTHR15722IFT140/172-RELATEDcoord: 24..247
NoneNo IPR availablePANTHERPTHR15722:SF2INTRAFLAGELLAR TRANSPORT PROTEIN 172 HOMOLOGcoord: 24..247
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 47..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:700073..703494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.180.1mRNA_P-littoralis_Contig62.180.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig62 700073..703494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig62.180.1 ID=prot_P-littoralis_Contig62.180.1|Name=mRNA_P-littoralis_Contig62.180.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bp
EARVGPRGGLRYRQSAVSEQEIVMQLRHLTTVTQPATGEGGDGVKMSKVM
AVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDL
CFSPDSTRLAVAQSDCIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPE
ARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDTFCAALATSPDGNGVVSA
HADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVRGG
GAGGGGEGGGGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf