prot_P-littoralis_Contig62.147.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig62.147.1
Unique Nameprot_P-littoralis_Contig62.147.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length508
Homology
BLAST of mRNA_P-littoralis_Contig62.147.1 vs. uniprot
Match: A0A6H5JV53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV53_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.100e-41
Identity = 172/464 (37.07%), Postives = 211/464 (45.47%), Query Frame = 0
Query:   12 SKATDEGNCADRLPNKTARLFSR-LSSPRSGQQXXXXXXXXXWAAGQKVWDP--SPTSATTGYVTSSPAPDWRRLGLSSLGRTASFDEARQAVSKNGLNAEESAKPRRASAFVSHGSALPPVVTEVGRRVSALGPSTTQAPR-QAPHYSDLLSAKTPSRSITSFNGHPGYSPPTLVGIRDPKIEGEGKGAVSRGDLKSPTDPPGDMPRWSNEPTPGGNSRLHGAAXXXXXXXXXXGTPGSR-AACMFHLMPATAAYTAGQTLRSPRKTPT--TTAAPSAQGGAGSSRRWS---------VLGQAQSGPADNTGSDEGGATLVPAWGAPGKEGNGDEDDEGA---------RGSGNRPAATMVASVRGXXXXXXXXXXDARENVSSGR--ARGLIMAPPPLAGR---LGSQPRRPSVVGPPDQDRGNAGANGYVAAWGATDEEDPAEEPTSRRGTGPADGGVAGR 445
            S A D  +   R PNKT+ LFS  +++      XXX       A  +KVW+P  SP S TTGYVTSSPA +WRR G+++LGR ASFDEAR    K+G+ +E+S+KPRRASAFV+HGSALPP V E+ RR SA    T      + PHYSDLLSA   SRS+T+FNG PGYSP  ++   D  IE E                 G          P G  R                 PGSR AA MFH+MPATA +       S  +TP+  TTA                        VL  A  GPA   G     AT   AWGAP  EG   +DD            RG G+RPA + + +V               E  +  R   RG +MA    AGR                          + +V AWGA   + P +EPT R     A+ GVAGR
Sbjct:  383 SVAADGASAQARTPNKTSSLFSGPVAAXXXXXXXXXQQQDGERATRRKVWNPHQSPPSITTGYVTSSPAMNWRRDGVATLGRVASFDEARMVAIKSGMQSEDSSKPRRASAFVAHGSALPPRVIEMHRRDSAYETRTVPGGAGREPHYSDLLSANASSRSVTAFNGCPGYSPSLMLAQPDAVIEEEAAAGXXXA---------GQSEDGVGAGAPSGGRRPP--------------VPGSRLAARMFHVMPATAVFAGNLPSYSRGETPSKATTAXXXXXXXXXXXXXXXXXXXXXXXXVLDPA--GPAAKEGGGAS-ATFAAAWGAPVDEGTEGKDDAAEAGKTSAAEDRGMGSRPAGSGIGNVV--------------EYQAPNRHPRRGSMMAQAAPAGRPXXXXXXXXXXXXXXXXXXXXXXXXXSAFVPAWGAPANDGPRQEPTGRS----AESGVAGR 802          
BLAST of mRNA_P-littoralis_Contig62.147.1 vs. uniprot
Match: D8LUB2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB2_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.990e-39
Identity = 150/361 (41.55%), Postives = 182/361 (50.42%), Query Frame = 0
Query:   12 SKATDEGNCADRLPNKTARLFSRLSSPRSGQQXXXXXXXXXWAAGQKVWDP--SPTSATTGYVTSSPAPDWRRLGLSSLGRTASFDEARQAVSKNGLNAEESAKPRRASAFVSHGSALPPVVTEVGRRVSALGPSTTQAPR-QAPHYSDLLSAKTPSRSITSFNGHPGYSPPTLVGIRDPKIEGEG-KGAVSRGDLKSPTDPPGDMPRWSNEPTPGGNSRLHGAAXXXXXXXXXXGTPGSRAAC-MFHLMPATA-------AYTAGQTLRSPRKTPTTTAAPSAQGGAGSSRRWSVLGQAQSGPADNTGSDEGGATLVPAWGAPGKEGNGDEDDEGA---------RGSGNRPAATMVASV 351
            S A D  +   R P KT  LFS  +       XXXXX     A  +KVW+P  SP S+TTGYVTSSPA +WRR G+++LGR ASFDEAR A  K+G+ +E+S+KPRRASAFV+HGSALPP V E+ RR SA    T  A   +  HYSDLLSA   SRS+T+FNG PGYSP   +   D  IE E   GA + G  +            +  P+ GG   +                PGSRAA  MFH+MPATA       +Y  G+T                          SVL  A  GP          ATLV AWGAP  EG  D+DD            RG G+R A + V +V
Sbjct:  357 SVAADGASAQARTPKKTTSLFSGPAXXXXXXXXXXXXDGER-ATRRKVWNPHQSPPSSTTGYVTSSPAMNWRRDGVATLGRAASFDEARLAERKSGMQSEDSSKPRRASAFVTHGSALPPRVIEMHRRDSAYETRTVPAGAGRVAHYSDLLSANASSRSVTAFNGRPGYSPSLTLAHPDAVIEEEAVAGAAAAGQREDGA--------GAGAPSGGGRPPM----------------PGSRAAARMFHVMPATAVFAGDLPSYARGETPSKATTXXXXXXXXXXXXXXXXXXXXSVLDPA--GPXXXXXXXXX-ATLVAAWGAPVDEGTEDKDDAADAGTTSAVEDRGMGSRRAGSGVGNV 689          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV53_9PHAE3.100e-4137.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB2_ECTSI1.990e-3941.55EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:601444..602967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.147.1mRNA_P-littoralis_Contig62.147.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig62 601444..602967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig62.147.1 ID=prot_P-littoralis_Contig62.147.1|Name=mRNA_P-littoralis_Contig62.147.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=508bp
GDGRNDAGHSGSKATDEGNCADRLPNKTARLFSRLSSPRSGQQGGGGGDG
GGWAAGQKVWDPSPTSATTGYVTSSPAPDWRRLGLSSLGRTASFDEARQA
VSKNGLNAEESAKPRRASAFVSHGSALPPVVTEVGRRVSALGPSTTQAPR
QAPHYSDLLSAKTPSRSITSFNGHPGYSPPTLVGIRDPKIEGEGKGAVSR
GDLKSPTDPPGDMPRWSNEPTPGGNSRLHGAAAAAGGGGGAGGTPGSRAA
CMFHLMPATAAYTAGQTLRSPRKTPTTTAAPSAQGGAGSSRRWSVLGQAQ
SGPADNTGSDEGGATLVPAWGAPGKEGNGDEDDEGARGSGNRPAATMVAS
VRGGGGGGNAGGGDARENVSSGRARGLIMAPPPLAGRLGSQPRRPSVVGP
PDQDRGNAGANGYVAAWGATDEEDPAEEPTSRRGTGPADGGVAGRGMGAR
CAKALFGGGGGGGAGAGAGNVNEDGAPHKARGSGNRPAATMVASVRGGGG
GGNAGGGD
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