mRNA_P-littoralis_Contig62.116.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: D8LUA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA9_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 7.640e-200 Identity = 451/856 (52.69%), Postives = 524/856 (61.21%), Query Frame = 1
Query: 1 MVNAELSVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFYSLHRKSKLFHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARIKMWQFTGLGGGAEYHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYYVNSNTGSDGEAMFIFSGWLMLALAVGNYFMSRWVELRLLKKAGCGGTLEYCARLTAMEKQTLEAKRVENARRTGLDNT-HLEQLRRQVDKAKADSNGHHRXXXXXXXXXXXKEDGRSKDERSSRLQDLIWRQIDQAKRHAQALSTSVGSGDLKKDMEKGFLRTPSRPRAFFHLGSRGASSKVLPGAE-GHHPQRLAPLNDPRAGVLQPLRTGQPSSQH-DSEP-----PKRAGPDGALLRTAGPTSSAATIVAGKPLECLPSALTSEAGAGAGAVAGVGPEAGAGGPCEHIMGLADFDAETSFHGSEYEMESDWGYSSPDDGQRGRVGGRRLRRQCRQETEQGAPRVGEKGKEKADGK---EEXXXXXXXXXXGGEVVAVHDSMQAQRNITSISSLLVPTDAGDGDXXXXXXXXXDGGPFDPEQSPLEVIVKR-PLPLVGEASVSNR-GQEGGDGDSGD------ENSYVAFSPRQSASFSLMPSVGRRVSVSVRQQQARRLQRRVSQATAWKQTSKLAMGVSKAAGKLVSTTAGGSHLDLFNDLSEIYPLSSPTLFHKTLDVLLLLSCTYL 2511
M ELSVFGLGS+ D+T+ETLALAGVVGF VAFEM AHRLEHRLAGTPYMG+L+KIYKELMIMGFISLGVFL+LQFGSVG T+GFYTFEFAHIVIF TTLIFV QACLMMVLSS+LK+RYEKSTNISVDHLLTFYSLHRKSK+FHARWLP SDLREVMEFKIVHSFFRTTFALPTTFNFALYMR+ATDSHILALVDVESSTW++L V FLNLARIK+WQ GL E HA XXXXXXXXXXXXXXXXX NTGSDGE MFI +GWLMLALAV NYFMSRWVELRLLKKAGC T EY +L +EKQTLEAK+ EN RRT L+ HL++L+RQVD+AK DS HH +++G DE+S I R + QA R+AQALS+SVGS D+K+++EK R+ + PR F LGS G SK+LP E + L G + +S+ D+ P P G G+ VA P P ++ G G A G G E+ L D S SEY ++S+ S DD G R Q R+ + V E+ KE D EE GG V D Q R + +I SL D G D +SPLEV+VKR P PL+ + +VS+R G D DSGD E S +FS R+S S S + S+GRR S + R+Q RRVSQ A T+KLAM V+KA ++V + + LDLFNDLS+IYP SPTLFHKTLDVLLLLSCTYL
Sbjct: 1 MATVELSVFGLGSQIDVTNETLALAGVVGFTVAFEMAAHRLEHRLAGTPYMGMLAKIYKELMIMGFISLGVFLLLQFGSVGSTLGFYTFEFAHIVIFFTTLIFVAQACLMMVLSSRLKRRYEKSTNISVDHLLTFYSLHRKSKMFHARWLPVSDLREVMEFKIVHSFFRTTFALPTTFNFALYMRKATDSHILALVDVESSTWVVLGVVFFLNLARIKIWQMIGLTKEEEDHADDDHGTTXXXXXXXXXXXXXXXXXTSSGYDNGRRWLAGDMGEFASDAYG-----NTGSDGETMFIVAGWLMLALAVFNYFMSRWVELRLLKKAGCEDTHEYHNQLAVIEKQTLEAKKHENRRRTVLNRGGHLQRLKRQVDEAKEDSRAHH-----SHHRHWRRKEGGGMDEKSFHAS--ISRHLGQAMRNAQALSSSVGSADIKEEIEKVIQRS-TPPRGFLRLGS-GNRSKILPEEELNRNSTNERDLLVDGLGTTANRSVAELASKRGDTTPLPPSVPNDVGSSGSNXXXXXXXXXXXASVALLP-RAQPPGERADLGLSRGTAAAAAETGG--GAREYTTVLVAPDPGDSVRASEYGVDSE----SRDDSS----GNNRRSPQEREGLD-----VEEEVKEGDDVNRPAEEWGRGGSWSGGGGRQVLGDDCHQL-RYVMNIPSLRTQKDG--------------GSSKDFTRSPLEVLVKREPKPLLQDKTVSHRAGYVCSDSDSGDINGSDTETSSRSFSHRKSMSSSNVSSMGRRASHTFREQV-----RRVSQHLA--NTTKLAMDVTKATDRIVRKPSIKAKLDLFNDLSDIYPFGSPTLFHKTLDVLLLLSCTYL 804
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A836CJ86_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ86_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.350e-43 Identity = 124/368 (33.70%), Postives = 190/368 (51.63%), Query Frame = 1
Query: 16 LSVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFYSLHRKSKLFHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARIKMWQFTGLGGGAEYHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYYVNSNTGSDGEAMFIFSGWLMLALAVGNYFMSRWVELRLLKKAGCGGTLEYCARLTAMEKQTLEA--KRVENARRTGLDNTHLEQLRRQV 1113
++VFGL S DI +LAL GVVGF V FE + +LEHRL GTP+ +L+KIYKELMI+G +SLGV ++ G++ FY+FE + FV+QA ++M S++LK++++ +T + +D + SL R+++ + A W+P S LR+ MEF I+ F TF +P F+F LYMR + D +IL+L+D++ TW+++ V N R GG ++ S Y NS S G F+ +GW+++ LAVG +F++R VEL+LL++AG +Y L ++ L A + +E R D L QL+ QV
Sbjct: 2 VNVFGLASHLDIAISSLALVGVVGFTVIFEHISSKLEHRLEGTPFREMLNKIYKELMIIGLVSLGVTILENSGNLVHGTAFYSFE---------AIFFVLQASMVMRFSARLKRQFDLATKVPIDQMAAQLSLQRRTRAYRAVWVPLSRLRDSMEFVILRHQFLRTFEVPLNFDFGLYMRYSIDEYILSLLDIQPVTWLVVIVVLLANWGRTAAMDALDDGGDDQH---------------ITAAEEVTHRAMAAATSTSMHDRPHLQYLFNFDLRSVYDNSVHNS-GLVSFVAAGWVLVLLAVGYFFVTRGVELKLLRQAGVRRLKDYEQVLHRLDLDQLHAGKRHLEEGRSVRHD---LTQLKAQV 341
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A6H5J9E6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E6_9PHAE) HSP 1 Score: 153 bits (386), Expect = 5.630e-40 Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 1
Query: 2581 MLMPAAGVFLFNALSVKTSSLLLAISAMDPDIIGKVIDEQIDEEKLVAQFRERLTSRLEELSVGQSGLASAFEEADVAGEGELTVKQLSHVLFTLNFHASK 2883
ML+PAAGVFLFNAL VKTSSLLLAI A+DP+IIGKVIDE+IDEEKLV QFRERLT+RLEE+ +GQSG ASAFEE DV G GELT+K+L VLF LNFH+ K
Sbjct: 1 MLLPAAGVFLFNALRVKTSSLLLAIFAIDPEIIGKVIDEKIDEEKLVVQFRERLTNRLEEIGLGQSGSASAFEEVDVTGHGELTIKELRDVLFALNFHSPK 101
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A7S1TPK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPK6_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.520e-33 Identity = 83/213 (38.97%), Postives = 129/213 (60.56%), Query Frame = 1
Query: 19 SVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFYSLHRKSKL--FHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARI 651
SVFG+G++ + +L G+VGF V FEM LE +L GT YM +++KIYKELMI+G IS G+F+ +Q S+ + F FE+AH++IF + V+Q+ ++ S LK + + + + ++ Y ++ FH R+ PF+ LR+ EF+IV +FF + LP F+F+ YM A D HI AL+DV+ +TWI+L LN+ R+
Sbjct: 22 SVFGMGADMEAFKVSLCFMGLVGFTVLFEMFTSYLEMKLQGTHYMEMVNKIYKELMILGLISFGLFMGVQTVSLDQSSYFLAFEYAHVLIFFVAIFLVLQSIALVSWCSYLKPLFAMADCSTDEEIVAEYDRLTGTEKWWFHNRFTPFAPLRDATEFRIVRNFFFREYHLPVEFDFSAYMNLAMDHHITALIDVDPTTWIMLMAAMALNVFRL 234
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A7S3UWY3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWY3_HETAK) HSP 1 Score: 137 bits (345), Expect = 3.510e-30 Identity = 116/289 (40.14%), Postives = 159/289 (55.02%), Query Frame = 1
Query: 181 LMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFYSLHRKSKLFHA-RWLPFSD-LREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARIKMWQF-TGLGGGAEYHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYYVNS--NTGSDGEAMFIFSGWLMLALAVGNYFMSRWVELRLLKKAGCGGTLEYCARLTAMEKQ 1032
+MIMGFIS G+F+ +Q G VG +FEFAHIVIF LIFV+ A + + ++ +LK Y++S + + DHLLT Y++ R S FH W S LR++MEFK+VH F+ + LP FNFA YM+E D +IL L++V+ STW+ + LNL K+ T +Y + XXXXXXXXXXXXXXXXXXXXX Y + + G G FI GW ++ + Y +R EL+LL KAG T Y + L +E++
Sbjct: 1 MMIMGFISFGIFMAVQAGGVGHGETLVSFEFAHIVIFFAALIFVLTALVFIFVTYRLKILYDRSASTTADHLLTEYAMARNSPWFHKMHWFGGSSKLRDMMEFKMVHLHFQMVYDLPNDFNFASYMQECLDHYILDLIEVDPSTWVFFLVLALLNLGVDKLMDLITYSSNDTDYDSSNYSXXXXXXXXXXXXXXXXXXXXXSDCDHFTSTSHSHRWLGGSSSAAGSYSSDPYSEGDHGLFTFILGGWFLVVWVIILYMAARHSELKLLLKAGAQSTHHYESVLVQVEEE 289
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A7S3XNJ9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNJ9_HETAK) HSP 1 Score: 119 bits (298), Expect = 7.840e-26 Identity = 78/215 (36.28%), Postives = 120/215 (55.81%), Query Frame = 1
Query: 2374 GKLVSTTAGGSH-------LDLFNDLSEIYPLSSPTLFHKTLDVLLLLSCTYLALWAANFMVVANEKPY-APLR-HVAMLMPAAGVFLFNALSVKTSSLLLAISAMDPDIIGKVIDEQIDEEKLVAQFRERLTSRLEELSVGQS---GLASAFEEADVAGEGELTVKQLSHVLFTLNFHASKAR-TKIFNVIDKNRKGVVSYHQLCELVFNREAA 2979
G L + G H L L D+S+IYP S LFHK ++V LLL+CTY AL+ ANF +VA P+ AP H+ ML PAA L V+T+SLLLA+ + P II KV++E ID +K+ A+ E++ + L S L FE+ + +GEL ++ + L ++ H S AR ++F D ++ G ++ H++ ++++ EAA
Sbjct: 63 GSLTRASTGLRHRRDPAADLQLTADISDIYPFGSKRLFHKGVEVFLLLACTYGALYFANFCLVAQRTPHLAPAAAHLLMLAPAACYALCMGRVVRTASLLLALGEIQPGIIAKVVEETIDTQKMAAKVAEKMRGHIRRLGGDPSTSKDLLVFFEQYALRPDGELGPREFRYALHCMHVHLSDARFRRLFKHFDLSKSGTLTSHEIAQVLWPEEAA 277
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A7S3UM22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM22_HETAK) HSP 1 Score: 103 bits (258), Expect = 1.050e-22 Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 19 SVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQA 321
SVFGLG+ + T L G++ F + FE HR+EH+L GTPYM +L+K+YKE+MIMGFIS G+F+ +Q G VG FEFAHI +F T L+FV+ A
Sbjct: 5 SVFGLGASLNTALTTYCLIGIILFTIIFEAVTHRVEHKLQGTPYMEMLAKVYKEMMIMGFISFGIFMAVQAGGVGHGDTLVAFEFAHIEVFFTALLFVLSA 105
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A482SVL1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVL1_9ARCH) HSP 1 Score: 96.7 bits (239), Expect = 9.310e-18 Identity = 67/224 (29.91%), Postives = 114/224 (50.89%), Query Frame = 1
Query: 25 FGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTP-YMGVLSKIYKELMIMGFISLGVFLMLQFGSVG--------GTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLS----SQLKKRYEKSTNISVDHLLTFYSLHRKSKLFHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARIKM 657
FG S D T V+ F+VAF++ +E+ L G+P Y ++ IYKELM+MG +S + +M++ G + G ++AHIV+F T+ FV+ A M S + +++Y K + L + + S ++ ++LPFS LR+ +EF ++ S FR T+ LP FNFA Y+ + L +D +W+++ + LN R+ +
Sbjct: 6 FGEISYLDPTKTLFCFIMVICFVVAFDVTIGVMEYYLEGSPIYNRMVQTIYKELMLMGVVSF-IIIMVRAGRLASNYATAESGAEWVLGIDYAHIVLFFLTVFFVLHALYFMKKSLSSNATYRRKYTKEVAAMIKELDVVETNAQASFFYYLQYLPFSQLRDQVEFYLMVSLFRDTYWLPLEFNFADYLSGCFSRYSLKTIDRSFYSWLVILVIVVLNFGRVML 228
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A7S3GNH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GNH1_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.110e-17 Identity = 67/221 (30.32%), Postives = 108/221 (48.87%), Query Frame = 1
Query: 16 LSVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYTFEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFY-SLHRKSKL------FHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFLNLARIKM 657
+++FG S T+ V+ FE H LE G++ K+Y+E MI+GFIS + L + + + F FAHIVI +F++Q+ L+ L + N S + L+ Y +++ + L F +P +LRE +E+KI+ FF + LP F FA YM ++++LV+V +WIILAC LNL R+++
Sbjct: 1 MAIFGGILYLPFKSGTIVFVAVLVVFTVFEGLLHILEVECNKHGLKGLIKKMYREFMILGFISFAILLATELSHFKTNIWYDAFHFAHIVILFVGFVFLVQSGLLSTLVRYRNRELLAHDNSSSEELIIDYVAMYNRGGLMKFLFNFGPISIPIPELREKIEYKIIQEFFVRNYNLPPEFKFANYMCGVLRHYVISLVEVRPISWIILACFVCLNLFRVEV 221
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Match: A0A662XLV8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLV8_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.700e-14 Identity = 61/208 (29.33%), Postives = 113/208 (54.33%), Query Frame = 1
Query: 19 SVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLA-GTPYMGVLSKIYKELMIMGFISLGVFLMLQFGSVGGTMGFYT-FEFAHIVIFLTTLIFVMQACLMMVLSSQLKKRYEKSTNISVDHLLTFYSLHRKSKLFHARWLPFSDLREVMEFKIVHSFFRTTFALPTTFNFALYMREATDSHILALVDVESSTWIILACVCFL 636
S+F +G ++ L L+ +V ++AFE H+LE R+A Y +LSK Y+ELMI+G + LG+ L+ + S G+ T F+ A ++IF+ L ++Q + +L Q R +++ +S + + + S +R DL+E++ +++ F + FALP F FA Y+R+ ++ I ++DV + W++L V ++
Sbjct: 5 SLFRVGDAVELWRVLLHLSILVVCLLAFERALHQLERRVAVSAKYERLLSKAYRELMILGLLGLGLKLVKEVPSGNGSSAAMTAFQIADLIIFILALALILQTICIFLLLRQHNVRADRAELLSTEDVAETLA---SSPSHQSR-----DLQELVHLRLMRHLFLSRFALPQLFPFAKYLRQTQNNQITHMIDVSAPMWVLLLIVAWI 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig62.116.1 >prot_P-littoralis_Contig62.116.1 ID=prot_P-littoralis_Contig62.116.1|Name=mRNA_P-littoralis_Contig62.116.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=993bp MVNAELSVFGLGSETDITSETLALAGVVGFIVAFEMGAHRLEHRLAGTPYback to top mRNA from alignment at P-littoralis_Contig62:527183..538111- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig62.116.1 ID=mRNA_P-littoralis_Contig62.116.1|Name=mRNA_P-littoralis_Contig62.116.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10929bp|location=Sequence derived from alignment at P-littoralis_Contig62:527183..538111- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig62:527183..538111- >mRNA_P-littoralis_Contig62.116.1 ID=mRNA_P-littoralis_Contig62.116.1|Name=mRNA_P-littoralis_Contig62.116.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2979bp|location=Sequence derived from alignment at P-littoralis_Contig62:527183..538111- (Pylaiella littoralis U1_48)back to top |