prot_P-littoralis_Contig62.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig62.78.1
Unique Name	prot_P-littoralis_Contig62.78.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	384

Homology

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BLAST of mRNA_P-littoralis_Contig62.78.1 vs. uniprot
Match: D8LU96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU96_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 8.170e-69
Identity = 173/389 (44.47%), Postives = 215/389 (55.27%), Query Frame = 0

Query:   19 WTLDRNELVGKLVRRHAFDFDAVSRTFRQHLKCEGVDFNSESTSPAALRKVFASSDRKRPTHRTVASLHSNI--------SDGDNRL----DGDWDHMTRTSAAQ---HLDKNTVARHCSTDTAGGNHNNRQKNEAACRIPKAPGY------------LDEATETATAPSS--STNESAWNFDRFLEEQRRKEVQHDDQKEKIFQKVLSALGSNAEASGAFELPPDILQAWGARKEKIAEEADDAEKRRQKLEEDHALAHQRQSLKQRYLPGSNDSVGEDPLASLTDTYSQ--EDEEGEGSGGLCHRQLLCEEKEKEQGERDDSFTRHQAVAEPVRLELGMDAEVLDEILDEIE-ESAIA----VETNSELSRVLDELDSAAGDKPTTA 371
            WT DRNELVGKLVRR AFDFDAVS  FR HL+ EGVDF SE T+PAALRKV+AS DRKRP     ++    +         + D  L     GDWD M   S  +   ++  N  +    + T  G +NN    E + ++  +                DE  ++ TAPSS  ST+ES W+F RFLEEQR KE+QHDD+KEKIFQK                                               ED  LA QRQSLK+RYL  S D +GEDPL  L DT +   + EEG+ +GGL  RQ   +E+ +E+ + DD+ T HQA A PVRLELGMDAE LD+IL+E+E ES++A     ETNSELSRVLDELD+AA + P  A
Sbjct:    6 WTPDRNELVGKLVRRFAFDFDAVSNAFRNHLQREGVDFKSEETAPAALRKVYASLDRKRPPRAVESAPLPGVRKENDEPGGEADRTLVDVSGGDWDSMGTGSQGKLNGYIMGNLHSSRSGSVTGEG-YNNLPPPERSDQLGASDDCPSEREDVQHTSGSDEGEKSVTAPSSLPSTDESGWDFGRFLEEQRLKEIQHDDRKEKIFQK-----------------------------------------------EDRHLACQRQSLKKRYLLDSEDFIGEDPLGLLDDTTAPAFQQEEGDIAGGLSPRQSHRQEEAEERLQGDDAHTSHQAAAGPVRLELGMDAEELDKILNELERESSLAGGGWAETNSELSRVLDELDAAASEPPANA 346

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig62.78.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig62.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LU96_ECTSI	8.170e-69	44.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig62	contig	P-littoralis_Contig62:316000..321328 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig62.78.1	mRNA_P-littoralis_Contig62.78.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig62 315434..321767 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig62.78.1 ID=prot_P-littoralis_Contig62.78.1|Name=mRNA_P-littoralis_Contig62.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=384bp
MNGLLVDHECTTMPKTFSWTLDRNELVGKLVRRHAFDFDAVSRTFRQHLK
CEGVDFNSESTSPAALRKVFASSDRKRPTHRTVASLHSNISDGDNRLDGD
WDHMTRTSAAQHLDKNTVARHCSTDTAGGNHNNRQKNEAACRIPKAPGYL
DEATETATAPSSSTNESAWNFDRFLEEQRRKEVQHDDQKEKIFQKVLSAL
GSNAEASGAFELPPDILQAWGARKEKIAEEADDAEKRRQKLEEDHALAHQ
RQSLKQRYLPGSNDSVGEDPLASLTDTYSQEDEEGEGSGGLCHRQLLCEE
KEKEQGERDDSFTRHQAVAEPVRLELGMDAEVLDEILDEIEESAIAVETN
SELSRVLDELDSAAGDKPTTATTNTLLRPGVQE*