prot_P-littoralis_Contig116.102.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig116.102.3
Unique Nameprot_P-littoralis_Contig116.102.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length687
Homology
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BLAST of mRNA_P-littoralis_Contig116.102.3 vs. uniprot
Match: A0A6H5KZ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ31_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.590e-19
Identity = 260/506 (51.38%), Postives = 298/506 (58.89%), Query Frame = 0 
Query:    1 MSHEPYGGNGAGGAVGRGRDHRSNSPNHFVGPDMDGGGFVGDGGRRS-AGVGEPGXXXXXXXXXPDSHRHPVSH-PMYGSTLVG-----RLPVPPV-TSAASNINISTSSAIGGSGIIGPAAPLRGVGGGGYSPRADEGRMNHPVLS-SDVTGMNMGMAAAMLVGGMNANTE-SMFARAMNTAAGGNG-PMGMVGMPGGGVGGVGIGXGMGGVLPAGPMTAGASAVMREGGGLAEVGPRGKRGKEAEVGPGGVRNLGPGAGVSDW------GRSXXXXXXXGVGDGAGGGRGNKRRKLPADLASPLLPLPPLPQPHHQQQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXQQLTAENGGEENKTNTAGLNSSGNGAMNQVPSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXELLRVCKHMDCRRGPCYGWEGQRRATFCASHRLPGQVNVVSPR 489
            + H PYGGNG+  AVGR +D +        G D+DGG  VGD  RR+ AG    GXXXXXXX   ++H H  ++  +YGS  +G     RLP+P   T+A+S  N   S     +G++  + P       GY P   + R N P LS SDV+ MNMGMAAAML GGMN     +MF RA  + A G G PMGMV         V  G G+GG +P     A ASA MRE         +G+ G  AE  PG  R+   GA ++DW      GR+       G G G G    NKRRK          P P LP P+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX      EL+RVC+H+ CRRGPCYGWEG++RATFCA+H LPGQVNVVSPR
Sbjct:   14 LPHGPYGGNGSN-AVGRVKDSQGGG-----GVDVDGG-SVGDVNRRTVAGREGDGXXXXXXXVGDNTHIHSTTNRQVYGSNAIGPLVAGRLPLPSSSTNASSMSNNGNSGGSTAAGVVTNSFPGMSA---GYPPPRVDIRSNPPGLSASDVSSMNMGMAAAML-GGMNGIPPGAMFGRATTSVASGGGMPMGMV---------VPTGGGIGGGVP--XXXAVASAAMREXXXXXXX-XQGQHGAGAE--PGAARSA-AGAFMADWSERPDMGRTDIDVGEEGDGSGTGA---NKRRKT--------TPTPSLPPPNLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGQPQELVRVCQHLGCRRGPCYGWEGEKRATFCAAHGLPGQVNVVSPR 460
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.102.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZ31_9PHAE1.590e-1951.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 400..432
NoneNo IPR availableCOILSCoilCoilcoord: 332..356
NoneNo IPR availableGENE3D6.10.140.110coord: 582..646
e-value: 1.8E-8
score: 36.5
coord: 507..574
e-value: 5.7E-5
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availablePANTHERPTHR13270:SF4PHD ZINC FINGER-CONTAINING PROTEIN-RELATEDcoord: 48..356
NoneNo IPR availablePANTHERPTHR13270PROTEIN C20ORF116-RELATEDcoord: 48..356
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 490..524
e-value: 3.4E-5
score: 24.3
coord: 604..637
e-value: 1.0E-7
score: 32.4
coord: 528..563
e-value: 2.6E-4
score: 21.5
coord: 642..675
e-value: 1.0E-5
score: 26.0
coord: 452..486
e-value: 6.9E-5
score: 23.3
coord: 567..600
e-value: 4.3E-8
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:357344..360167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.102.3mRNA_P-littoralis_Contig116.102.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig116 357036..363068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig116.102.3 ID=prot_P-littoralis_Contig116.102.3|Name=mRNA_P-littoralis_Contig116.102.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=687bp
MSHEPYGGNGAGGAVGRGRDHRSNSPNHFVGPDMDGGGFVGDGGRRSAGV
GEPGGGGGGGGGGPDSHRHPVSHPMYGSTLVGRLPVPPVTSAASNINIST
SSAIGGSGIIGPAAPLRGVGGGGYSPRADEGRMNHPVLSSDVTGMNMGMA
AAMLVGGMNANTESMFARAMNTAAGGNGPMGMVGMPGGGVGGVGIGGGMG
GVLPAGPMTAGASAVMREGGGLAEVGPRGKRGKEAEVGPGGVRNLGPGAG
VSDWGRSDMGRTDAGVGDGAGGGRGNKRRKLPADLASPLLPLPPLPQPHH
QQQQQHQQQQQHQQQQQHQQQQQHQQQQQHQQQQQLQHQHQQQQQLQQLQ
QQLTAENGGEENKTNTAGLNSSGNGAMNQVPSSKQQQQQQQQPQQQQQPQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKPQQQQQQQKPVQQQELLR
VCKHMDCRRGPCYGWEGQRRATFCASHRLPGQVNVVSPRCAREGCRLGPS
YGQPGVKKPVFCSGHRLPGQVNVVSPRCQHLGCSRGPSYGHGGDVRKPMF
CAGHRLYGMVNVVSPQCREENCTRGPSYGFEGERAAFCAKHKQEGQVNVV
SRRCKEDGCMRGPSYGQEGDRRASYCAKHKRDGMINIVSRKCYAPGCGKG
PSFGREGDRKAGYCALHKREGDVNLANNVRFFARPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys