prot_P-littoralis_Contig62.77.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig62.77.1
Unique Nameprot_P-littoralis_Contig62.77.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length589
Homology
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 8.080e-84
Identity = 178/274 (64.96%), Postives = 193/274 (70.44%), Query Frame = 0
Query:  249 DGFKVVVGRE-VAPAAVTPVVPTKRFLRGTNTLVNTTSTGAXXXXXXXXXXTSSKLVSAAAGIASLVPSKGAPVATARPSLKAGEYPPTAELQESTGRSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTSGRSQVTTITAGLGGNSSGLSHTRHGGGDRPGRMENSLQPQRPLQGQVHNMNGPPGSGPTXXXXXXXXXPNVFRPQGPAGNNGAWGXXXXXX-----GPERFSHGFGPAPPPG-VGKASPPWFDGQ 515
            DGF+VVVGRE VAPAA  PVVPTKRFLRGTNTLVN+T+T             +SK VSAAAGIASLVPSKGAPVATA+PSLK GEYPPTAELQ+STG++AFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRT GRS+ +  +AG        S +   G  R GR+ NSLQPQ+    QVH+ N PPG             PN FRPQG  G N  WG XXXXX     GPE F  GFG  PP G    ASP W DGQ
Sbjct:  247 DGFRVVVGREGVAPAAA-PVVPTKRFLRGTNTLVNSTTTSGTTA--------TSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSR-SGKSAGXXXXXXXXSGSS--GPPRHGRVVNSLQPQQRPPIQVHHNNNPPG-------------PNNFRPQGLTGGNVLWGGXXXXXXXXXPGPEGFPQGFGSRPPAGGQSNASPLWLDGQ 495          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 8.540e-69
Identity = 134/183 (73.22%), Postives = 143/183 (78.14%), Query Frame = 0
Query:  250 GFKVVVGREVAPAAVTPVVPTKRFLRGTNTLVNTTSTGAXXXXXXXXXXTSSKLVSAAAGIASLVPSKGAPVATARPSLKAGEYPPTAELQESTGRSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTSGRSQVTTITAG-LGGN-SSGLSHTRHGGGDRPGRME 430
            GF+VVVGRE    A  PVVPTKRFLRGTNTLVN T+TG            SSK VSAAAGIASLVPSKGAPVATA+PSLK GEYPPTAELQ+STG++AFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRT GRS+      G +GGN  SG S     G  R GR+E
Sbjct:  249 GFRVVVGREAVAPAAAPVVPTKRFLRGTNTLVNATTTGGTTA--------SSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAGGRVGGNVGSGSS-----GPPRHGRVE 418          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A835YKB3_9STRA (Fip1 motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.840e-16
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0
Query:  332 EYPPTAELQESTGRSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDR 394
            +YPP  ELQ   GRSAF V +D +E+ PWR PGVD++DFFNYGFTE +WR Y   QLR RYD+
Sbjct:  206 DYPPLEELQLRYGRSAFGVRMDELEDTPWRRPGVDLSDFFNYGFTEGTWRAYLLAQLRLRYDK 268          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.200e-14
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
Query:  325 RPSLKAGEYPPTAELQESTG----RSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 391
            +P + + +Y PT E     G    R+AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  115 QPRIPSDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQKR 185          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A7S4DHM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHM3_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 2.260e-14
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0
Query:  332 EYPPT-AELQESTGR-SAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDR 394
            E+PP   ELQ    R SAFD++IDG+++ PWR PGVDI+D+FNYG TE +WR YC KQL  RY++
Sbjct:  142 EFPPLPTELQHPGKRNSAFDIEIDGLDDHPWRRPGVDISDYFNYGLTEKTWREYCIKQLTLRYEQ 206          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.960e-14
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  332 EYPPTAELQESTG----RSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 391
            +Y PT E     G    R+AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  112 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQKR 175          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 9.460e-14
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  332 EYPPTAELQESTG----RSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 391
            +Y PT E     G    R+AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  123 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 186          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 83.2 bits (204), Expect = 1.560e-13
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  332 EYPPTAELQESTG----RSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 391
            +Y PT E     G    R+AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  126 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 189          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A8C4RAP8_EPTBU (Pre-mRNA 3'-end-processing factor FIP1 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RAP8_EPTBU)

HSP 1 Score: 76.3 bits (186), Expect = 8.180e-13
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  344 GRSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTSGRSQVT----TITAGLGGNSS 413
            G +  ++D+D  EE+PWR PG D++D+FNYGF E++W+ YCEKQ R R       S  T    T+  G  GNSS
Sbjct:   14 GNAVLEIDLDTFEEKPWRKPGADLSDYFNYGFQEETWKAYCEKQKRLRQGLDPNTSNSTSNRITVQQGRTGNSS 87          
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Match: A0A137P6A2_CONC2 (Fip1-domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6A2_CONC2)

HSP 1 Score: 77.8 bits (190), Expect = 1.310e-12
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  344 GRSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYD 393
            G S  D+D+DG+EEQPWR PG DI D+FNYGF E +WR YC KQ   R D
Sbjct:  144 GESLLDLDLDGLEEQPWRKPGADITDYFNYGFNEVTWRAYCNKQKSMRED 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF87_9PHAE8.080e-8464.96Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU95_ECTSI8.540e-6973.22Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YKB3_9STRA3.840e-1661.90Fip1 motif-domain-containing protein n=1 Tax=Tribo... [more]
A0A1V9YWA6_9STRA2.200e-1456.34Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
A0A7S4DHM3_HETAK2.260e-1458.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1W0A514_9STRA8.960e-1460.94Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
A0A067C040_SAPPC9.460e-1460.94Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
T0QKY1_SAPDV1.560e-1360.94Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A8C4RAP8_EPTBU8.180e-1345.95Pre-mRNA 3'-end-processing factor FIP1 n=1 Tax=Ept... [more]
A0A137P6A2_CONC21.310e-1262.00Fip1-domain-containing protein n=1 Tax=Conidiobolu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 349..390
e-value: 1.9E-21
score: 75.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 566..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..344
NoneNo IPR availablePANTHERPTHR13484:SF0PRE-MRNA 3'-END-PROCESSING FACTOR FIP1coord: 170..552
NoneNo IPR availablePANTHERPTHR13484FIP1-LIKE 1 PROTEINcoord: 170..552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:310850..315688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.77.1mRNA_P-littoralis_Contig62.77.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig62 310279..315802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig62.77.1 ID=prot_P-littoralis_Contig62.77.1|Name=mRNA_P-littoralis_Contig62.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=589bp
MVSTRGRTGSDGGEGPPSPPPSLPSPPGKEKEMAKLDNTKSAEQAASNND
EASPPPPADQPATEKEVEHVGERQGDDISGAKVARGTTQESQCDGGAQLG
SAASAADESSTTAPAAAAADAKVPGMEETKGASPDGDGQALTGSSAGKKP
DDGGGEGEAEGGASDLVETGAAESKQDNAGEPDDAQKRPENLGKQQQTPP
PEKKLQPAGRAQEPQGDIVDIAGEPTATQAEGQRAVRQIDSSDDEDEDDG
FKVVVGREVAPAAVTPVVPTKRFLRGTNTLVNTTSTGASGAKGAGSSSTS
SKLVSAAAGIASLVPSKGAPVATARPSLKAGEYPPTAELQESTGRSAFDV
DIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTSGRSQ
VTTITAGLGGNSSGLSHTRHGGGDRPGRMENSLQPQRPLQGQVHNMNGPP
GSGPTGPGLPGLPGPNVFRPQGPAGNNGAWGGGGGGSGPERFSHGFGPAP
PPGVGKASPPWFDGQPQQQQQMQMQQQMRQQNRQQFGPGPGPGSGMVRPG
MNGGNKTGMVDDSAGMRRSRSPDSRDGPLENKIPRLRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom