prot_P-littoralis_Contig62.66.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig62.66.1
Unique Nameprot_P-littoralis_Contig62.66.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length720
Homology
BLAST of mRNA_P-littoralis_Contig62.66.1 vs. uniprot
Match: A0A6H5JGF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF5_9PHAE)

HSP 1 Score: 690 bits (1781), Expect = 8.760e-238
Identity = 453/817 (55.45%), Postives = 513/817 (62.79%), Query Frame = 0
Query:   10 FAGVSSAALKKVHLQRLLAFAVALVACTLASWQLMIACWAITPFTPDRDSGILRDFLSILVVSFFHILAAFSRYLVCDADDSPRHRXXXXXXXXXXXXXXXXXXXGGGRDFSYSALALPNLGQGLATVVAHGLIGMSLGLYAWNIVAARAGE------------------------------------------------------------------------------------------LSEGSGALGGVVAGGVICSIWSSLSFLKKRRHHLRFGLPRGAALPSHLRGEACGSAKEGLVCGAVLATVYLVLRVVGELLPSSLPGRSLVMLLGLPAAAAP-DGPSGEAFTVVVVDRAGRLAVTYLVFLSTAVNFGLHGFLSKMMNLIIVAPQDFLRLWQASV-AAVDSQGAGEG-----AGAPSSPAAMLLDALSIGHETVLHPAEKAFLEARGLPVDTGGGAASRVSSYTRAGPMDNWADETDLQRRALALSCVEPPRTGRRGEGGGG-------KMASTRGVVVPVWAQVAKAQALRSLALKAPCDKDLRAALYEVNIAQVLRTLCLELDEASLLLQISAFREDPAEAARALGCEGRGDIQWLVGYTASSSSPGEASRGWLNWLKDGLSPPFRGTVY--GLLAALRPLFSSGEGGXXXXXXXXXXXXXGRRGARGAKALSPARLQSAIWAAQGMSALMVRALGESRIWSLDTMLPVVLGSLAGLLLAVQQPD-GYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGRE------LEAALEKALTEVATKYRSCLPDFRFPPVYAETINR 713
            FAG SS ALK+VH QRL+AF V LV CTL SW L+I CW +TP T    S I  DFLSI+VV+  H LA FSRYLVCDADD+PR R                    GG  FS+SALALPNLGQGLATVVAH LIGM+LG +AWN  A R G                                                                                           L+E SGALGG+VAGG  CS WS++ FL++RRHHLR GLP GAA+P++LRGEACGSAKEGL+CGAV+   YLV+R V ELL  S+ GR+L +LLGL AAA+  +G  G      V +  GRL V YL+ +STA NF LHGFL+K+MN IIVA QDFLRLWQA+V AA D Q    G     A  P+SPAAMLLD+LSIGHETVL  AE+ FL+ARGL    GG      SSYTR GPM +W +ET+LQRRA+AL+C+EPPRT RR  GG G         + TRGVVVPVWAQVAKAQAL+SLAL+APCDK+LR ALYEVNIAQVLRTLCLE+DEASLLLQ SA  ED AEAARALGCEGRGDI+WLV   ASS   GEA R WL WL DGL+ PF GT+   GL+A LRPL +S   G             G       + LSPARLQS IWA QGMSAL+V A GESR+WSLDTMLPVVLGSL+GLLLAVQ    G GXXXXXXXXX          XXXXXXXXXX            L AALE+AL  V++KYRSCLPD RFPPVYAETINR
Sbjct:    9 FAGSSSTALKRVHRQRLMAFGVVLVGCTLVSWILVILCWQLTPSTRGPGSRIPADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAAS-----------------GG--FSFSALALPNLGQGLATVVAHWLIGMALGFFAWNFAAPRGGADGIVNEFMKFGGKGMIQLMVLLYNWVWKNEYTPSRWREGVVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSITGGLAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEACGSAKEGLLCGAVIGAGYLVVRTVSELLTGSMVGRALSVLLGLSAAASTSEGADGGGGQPTVGEGVGRLLVAYLIVVSTAANFALHGFLTKLMNFIIVASQDFLRLWQATVDAASDEQDRAGGRPAAAANVPASPAAMLLDSLSIGHETVLRTAERDFLQARGLGGGNGGAGGHEASSYTR-GPMSDWTEETELQRRAVALACMEPPRTERRRGGGVGVRGIVRMPFSYTRGVVVPVWAQVAKAQALQSLALRAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASAVGEDKAEAARALGCEGRGDIKWLVESMASSR--GEAGRRWLGWLNDGLTLPFSGTLTLAGLIAVLRPLMASNASGSGRGRGGEEEGGVG-------EVLSPARLQSTIWAVQGMSALVVNAPGESRMWSLDTMLPVVLGSLSGLLLAVQDRSRGQGXXXXXXXXXREAVSTEGVQXXXXXXXXXXXXXXXXXXXXXLLVAALEEALARVSSKYRSCLPDLRFPPVYAETINR 796          
BLAST of mRNA_P-littoralis_Contig62.66.1 vs. uniprot
Match: D8LU93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU93_ECTSI)

HSP 1 Score: 662 bits (1707), Expect = 5.480e-229
Identity = 397/647 (61.36%), Postives = 452/647 (69.86%), Query Frame = 0
Query:   10 FAGVSSAALKKVHLQRLLAFAVALVACTLASWQLMIACWAITPFTPDRDSGILRDFLSILVVSFFHILAAFSRYLVCDADDSPRHRXXXXXXXXXXXXXXXXXXXGGGRDFSYSALALPNLGQGLATVVAHGLIGMSLGLYAWNIVAAR-AGELSEGSGALGGVVAGGVICSIWSSLSFLKKRRHHLRFGLPRGAALPSHLRGEACGSAKEGLVCGAVLATVYLVLRVVGELLPSSLPGRSLVMLLGLPAAAAP-DGPSGEAFTVVVVDRAGRLAVTYLVFLSTAVNFGLHGFLSKMMNLIIVAPQDFLRLWQASV-AAVDSQGAGEG-----AGAPSSPAAMLLDALSIGHETVLHPAEKAFLEARGLPVDTGGGAASRVSSYTRAGPMDNWADETDLQRRALALSCVEPPRTGRRGEGGGG---------KMASTRGVVVPVWAQVAKAQALRSLALKAPCDKDLRAALYEVNIAQVLRTLCLELDEASLLLQISAFREDPAEAARALGCEGRGDIQWLVGYTASSSSPGEASRGWLNWLKDGLSPPFRGTVY--GLLAALRPLFSSGEGGXXXXXXXXXXXXXGRRGARGAKALSPARLQSAIWAAQGMSALMVRALGESRIWSLDTMLPVVLGSLAGLLLAVQ 637
            FAG SS ALK+VH QRL+AF V LV CTL SW L+I CW + P T    S IL DFLSI+VV+  H LA FSRYLVCDADD+PR R                    GG  FSYSALALPNLGQGLATVVAH LIGM+LG +AWN  A R AG ++E SGALGG+VAGG  CS WS++ FL++RRHHLR GLP GAA+P++LRGEA GS KEGL+CGAV+   YLVLR V ELLP S+ GR+L +LLGLP+AA+  +G  G     VV +  GRL V YL+  STA NF LHGFL+K+MN IIVA         A+V AA D Q    G     A  P SPAAMLLD+LSIGHETVL  AE+ FL+ARGL   +GG      SSYTR GPM +W +ET+LQRRA+AL+C+EPPRT RR  GG G           + TRGVVVPVWAQVAKAQAL+SLALKAPCDK+LR ALYEVNIAQVLRTLCLE+DEASLLLQ S   ED AEAARALGCEGR DI+WLV   ASS   GEA R WL WL DGLS PF GT+   GL+A LRPL +S   G             G       + LSPAR+QS IWA QGMSAL+V A GESR+WSLDTMLPVVLGSL+GLLLAVQ
Sbjct:    9 FAGSSSTALKRVHRQRLMAFGVVLVGCTLVSWILVILCWQLMPSTRGPGSRILADFLSIMVVALCHSLAVFSRYLVCDADDAPRRRAAS-----------------GG--FSYSALALPNLGQGLATVVAHWLIGMALGFFAWNFAAPRGAGGIAETSGALGGLVAGGAACSAWSAVCFLRERRHHLRLGLPSGAAMPAYLRGEAYGSVKEGLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGTDGGGGQPVVGEGVGRLLVAYLIVASTAANFALHGFLTKVMNFIIVA---------ATVDAASDEQDRAGGRPAAAASVPVSPAAMLLDSLSIGHETVLRTAERDFLQARGLDGGSGGAGGHGASSYTR-GPMSDWTEETELQRRAVALACMEPPRTERRRGGGVGVGVGGIIRMPFSYTRGVVVPVWAQVAKAQALQSLALKAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASVVGEDKAEAARALGCEGRRDIKWLVESMASSR--GEAGRRWLGWLNDGLSLPFSGTLTLAGLVAVLRPLMTSNASGSGRGRGGEEDGGVG-------EVLSPARMQSTIWAVQGMSALVVCAPGESRMWSLDTMLPVVLGSLSGLLLAVQ 617          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGF5_9PHAE8.760e-23855.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU93_ECTSI5.480e-22961.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 664..679
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:277618..292732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.66.1mRNA_P-littoralis_Contig62.66.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig62 277576..293447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig62.66.1 ID=prot_P-littoralis_Contig62.66.1|Name=mRNA_P-littoralis_Contig62.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=720bp
MTVSTDSTAFAGVSSAALKKVHLQRLLAFAVALVACTLASWQLMIACWAI
TPFTPDRDSGILRDFLSILVVSFFHILAAFSRYLVCDADDSPRHRRRRRS
SSSSSSTAGGPGRRGGGRDFSYSALALPNLGQGLATVVAHGLIGMSLGLY
AWNIVAARAGELSEGSGALGGVVAGGVICSIWSSLSFLKKRRHHLRFGLP
RGAALPSHLRGEACGSAKEGLVCGAVLATVYLVLRVVGELLPSSLPGRSL
VMLLGLPAAAAPDGPSGEAFTVVVVDRAGRLAVTYLVFLSTAVNFGLHGF
LSKMMNLIIVAPQDFLRLWQASVAAVDSQGAGEGAGAPSSPAAMLLDALS
IGHETVLHPAEKAFLEARGLPVDTGGGAASRVSSYTRAGPMDNWADETDL
QRRALALSCVEPPRTGRRGEGGGGKMASTRGVVVPVWAQVAKAQALRSLA
LKAPCDKDLRAALYEVNIAQVLRTLCLELDEASLLLQISAFREDPAEAAR
ALGCEGRGDIQWLVGYTASSSSPGEASRGWLNWLKDGLSPPFRGTVYGLL
AALRPLFSSGEGGGRGRGRGDGGGGAGRRGARGAKALSPARLQSAIWAAQ
GMSALMVRALGESRIWSLDTMLPVVLGSLAGLLLAVQQPDGYGGGGGDGG
DGGEQQQQQQQQQDEEEEQQRGGRRGRELEAALEKALTEVATKYRSCLPD
FRFPPVYAETINRLLEASS*
back to top