mRNA_P-littoralis_Contig62.32.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig62.32.2
Unique NamemRNA_P-littoralis_Contig62.32.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: D8LU79_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU79_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 1.190e-160
Identity = 230/258 (89.15%), Postives = 241/258 (93.41%), Query Frame = 2 
Query:   62 MAEAGALSAPSPFTSDKGRKRWFPLESNPDVMNKYIAKMGWPAQAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAREEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTDDA 835
            MAEA ALSAPSPF SDKGRKRWFPLESNPDVMNKYIAKMGWPA AY FTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEK+REEEAAR++ES E+ NP LY+MKQTVGNACGTVGLLHCALNASISKGI+LDK+CFLHRFWEKT+QLTPA+IAQALHDEDELEEVHEEAAQ+GQSDQIAREEK+NTHFVCLTEMDG LYELDGRKEGPVPHGSTSP TLLQDAC VVKQFM RDPGELR    FTIVALAP  TDDA
Sbjct:    1 MAEAEALSAPSPFKSDKGRKRWFPLESNPDVMNKYIAKMGWPAGAYSFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKHREEEAARVRESTESLNPKLYFMKQTVGNACGTVGLLHCALNASISKGITLDKECFLHRFWEKTRQLTPAQIAQALHDEDELEEVHEEAAQEGQSDQIAREEKINTHFVCLTEMDGTLYELDGRKEGPVPHGSTSPATLLQDACAVVKQFMDRDPGELR----FTIVALAPTATDDA 254
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A1V9YLF7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLF7_9STRA)

HSP 1 Score: 269 bits (688), Expect = 4.210e-84
Identity = 141/234 (60.26%), Postives = 174/234 (74.36%), Query Frame = 2 
Query:  119 KRWFPLESNPDVMNKYIAKMGWPAQ-AYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALA 814
            KRWFPLESNP VMN+YI +MG PA  A+ F DVYSTEDWAL MVP+PVL V+MLFPIK  TE Y + E  RI+++ +A +PN+YYMKQTVGNACGTVG+LH   NA   + ++     FL  F+ KT+  TPAEIA+ L ++DELEE H  AAQ+GQSDQ+   ++ +NTHFVCL+ +DG LYELDGRK  P+ HG +S  TLL+DAC VV+ FM RD GE+R    FTIVALA
Sbjct:   10 KRWFPLESNPAVMNEYIKRMGLPADSAFEFCDVYSTEDWALDMVPRPVLAVIMLFPIKAHTEAYAKAEHERIEKNGQAVSPNVYYMKQTVGNACGTVGILHALGNAG--EHMTFTHGSFLQSFFAKTRDKTPAEIAEILEEDDELEETHASAAQEGQSDQLEHIDDPINTHFVCLSVVDGHLYELDGRKAFPINHGPSSSATLLEDACRVVRDFMQRDEGEVR----FTIVALA 237
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: H3H379_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=15 Tax=Phytophthora TaxID=4783 RepID=H3H379_PHYRM)

HSP 1 Score: 268 bits (685), Expect = 1.110e-83
Identity = 137/245 (55.92%), Postives = 178/245 (72.65%), Query Frame = 2 
Query:  104 SDKGRK--RWFPLESNPDVMNKYIAKMGWPAQAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTD 829
            SD+G K  RWFPLESNP+VMN Y+ KMG+P  A+ F DV STE+WALAMVP PV+ V+MLFPIK  TE+  ++EA RI++  +  +PN+YYM+QTVGNACGTVG+LH   N  +   + L    +L +F+  T+  TP EIAQ L ++DELEE H  AA+ GQS+Q+   ++ +NTHFVC + +DG LYELDGRK+ P+ HG +SPDTLLQDAC  +K+FM RD GE+R    FTI+ALA   TD
Sbjct:    2 SDEGNKHKRWFPLESNPEVMNAYVEKMGFPTTAFSFCDVLSTEEWALAMVPSPVVAVIMLFPIKPHTEEADKQEAKRIEKDGQIMSPNVYYMRQTVGNACGTVGILHAIGN--MRHLVRLTPGSYLDKFFNTTKTKTPEEIAQYLEEDDELEETHGSAAEAGQSEQLESVDDPINTHFVCFSCVDGTLYELDGRKKRPINHGPSSPDTLLQDACQAIKKFMARDEGEMR----FTILALAKTATD 240
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A3F2RNT3_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNT3_9STRA)

HSP 1 Score: 261 bits (667), Expect = 5.500e-81
Identity = 130/238 (54.62%), Postives = 169/238 (71.01%), Query Frame = 2 
Query:  119 KRWFPLESNPDVMNKYIAKMGWPAQAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTD 829
            KRWFPLESNPDVMN Y+ KMG+P   + F DV STE+WAL MVP PV+ V+MLFPIK  TE+  ++EA RI+   +  +PN+YYM+QTVGNACGTVG+LH   N  +   + L    +L +F+ KT+  TP EIAQ L ++DELEE H  AA+ GQS+Q+   ++ +NTHFVC + +DG LYELDGRK+ P+ HG +SP T+L DAC  +K+FM RD GE+R    FTI+ALA    D
Sbjct:    9 KRWFPLESNPDVMNNYVEKMGFPTDQFSFCDVLSTEEWALGMVPSPVVAVIMLFPIKPHTEEAAKQEAVRIEREGQTVSPNVYYMRQTVGNACGTVGILHAIGN--MRHLVQLTPGSYLDKFFNKTKTKTPKEIAQYLEEDDELEETHGSAAEAGQSEQLETVDDPINTHFVCFSHVDGHLYELDGRKKHPINHGPSSPTTVLPDACAEIKKFMARDEGEMR----FTILALAKTAAD 240
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A7S1C7C4_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7C4_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.040e-80
Identity = 137/252 (54.37%), Postives = 174/252 (69.05%), Query Frame = 2 
Query:   86 APSPFTSDKGRKRWFPLESNPDVMNKYIAKMGWPAQAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKG---ISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAREEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTDD 832
            AP+     K +KRWFPLESNP VMNKY+ K+G+P   Y   +V ST+DWAL MVP+PV+GVVMLFP+K+++EK+R EEAARI    +     +YY KQTVGNACGT+GLLH A NA+   G   + L +D +L+RF  +T+ +TP E A AL D+DELEE H  AA +GQ+     +E VN HFV  + + G L ELDGRK+ P+ HG T+P+TLL DAC VV+ FM RDP E+R    FTIVALA    DD
Sbjct:   43 APAEGGKKKRKKRWFPLESNPHVMNKYLEKLGFPTMMYHTVEVMSTDDWALDMVPKPVIGVVMLFPVKDASEKHRHEEAARIAAEGQDLPAEVYYTKQTVGNACGTIGLLHVAANATSFAGSDLVPLGEDSWLYRFLARTKDMTPDERAAALEDDDELEESHGAAASEGQTTVPDIDESVNAHFVAFSNVKGKLVELDGRKKSPIVHGDTTPETLLADACKVVRDFMARDPDEVR----FTIVALAANTGDD 290
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A067C1R0_SAPPC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1R0_SAPPC)

HSP 1 Score: 259 bits (661), Expect = 5.840e-80
Identity = 137/242 (56.61%), Postives = 168/242 (69.42%), Query Frame = 2 
Query:  107 DKGRKRWFPLESNPDVMNKYIAKMGWPAQ-AYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVT 826
            D   KRWFPLESNP VMN+Y  +MG PA  A+ F DVYSTEDWAL MV +PVL V+MLFPIK  TE Y +EE  RI+ S +  +PN+YYMKQTVGNACGTVG+LH   N  +   ++     FL  F+EKT+  TP EIA  L  +DELEE H  AAQ+GQS+Q+   ++ +NTHFVC   +D  LYELDGRK  P+ HG +S +TLL+DAC V++ FM RD GE+R    FTIVAL P  T
Sbjct:    6 DAKAKRWFPLESNPQVMNEYAKRMGLPADSAFEFCDVYSTEDWALDMVLRPVLAVIMLFPIKTHTEAYAKEERQRIEASGQVVSPNVYYMKQTVGNACGTVGILHALGN--VGDYVAYQPGSFLQTFFEKTRAKTPEEIAVILEGDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFCTVDDHLYELDGRKAFPINHGPSSRETLLEDACRVIQSFMQRDDGEVR----FTIVALRPRPT 241
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A8K1FQY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQY3_PYTOL)

HSP 1 Score: 258 bits (660), Expect = 6.550e-80
Identity = 130/241 (53.94%), Postives = 177/241 (73.44%), Query Frame = 2 
Query:  113 GRKRWFPLESNPDVMNKYIAKMGWPAQAYRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTDD 832
            G KRWFPLESNP VMN Y+ K+G+P   + F DV STEDWAL MVP+PV+GV+MLFPIK+ TE + +EEAARI++  +  +P++YYMKQTVGNACGT+GLLH   N  + + +++    +L + + +T   TP +IA  L ++DELE+ HE AAQ+GQS+Q+   ++ V+THF+C + +DG LYELDGRK+ P+ HG +S +TLL DAC V++QFM RD GE+R    FTI+ALA    DD
Sbjct:    7 GGKRWFPLESNPAVMNTYVEKLGFPTSDFSFCDVLSTEDWALDMVPKPVVGVLMLFPIKKHTEAFAKEEAARIEKDGQVVSPHVYYMKQTVGNACGTIGLLHAIGN--MRQHVTIPATSYLGKLFNQTVGQTPDKIADYLEEDDELEDTHESAAQEGQSEQVEDVDDPVDTHFICFSCVDGHLYELDGRKKFPINHGPSSQETLLSDACKVIQQFMVRDEGEVR----FTILALAKTADDD 241
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A024UT19_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT19_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.220e-79
Identity = 139/247 (56.28%), Postives = 178/247 (72.06%), Query Frame = 2 
Query:   98 FTSDKGRKRWFPLESNPDVMNKYIAKMGWPAQA-YRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKD-CFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTD 829
             T+    KRWFPLESNP VMN+YI +MG P  A + F D+YST++WAL MV +PVLGVVMLFPIK  +E + +E+  RI++  +  +PN+Y+MKQTVGNACGTVG+LH   NA   K     +D  FL  F+ KT   TP EIA  L D+DE+EE H  AAQ+GQS+Q+ R ++ +NTHFVC + +DG LYELDGRK+ PV HG +S +TLL+DAC V++QFM RD GE+R    FTIVALA A+TD
Sbjct:    1 MTTASKAKRWFPLESNPQVMNEYIRRMGIPEDADFAFCDLYSTDEWALEMVLRPVLGVVMLFPIKPVSELHAKEQLERIEKEGQIVSPNVYFMKQTVGNACGTVGILHALGNA---KDYLPPRDGSFLSSFFSKTVGKTPDEIAAILQDDDEIEETHASAAQEGQSEQLERVDDPINTHFVCFSVVDGHLYELDGRKKFPVNHGPSSQETLLEDACRVIRQFMARDEGEVR----FTIVALAKALTD 240
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: A0A485KZ13_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ13_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.390e-79
Identity = 138/240 (57.50%), Postives = 174/240 (72.50%), Query Frame = 2 
Query:  104 SDKGR-KRWFPLESNPDVMNKYIAKMGWPAQA-YRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALA 814
            +++GR KRWFPLESNP VMN+YI +MG P  + + F DVYSTEDWA+ MV +PVL VVMLFPIK+++E Y +EE ARI+   +  + N+YYMKQTVGNACGTVG+LH   NA     +    D FL  F+ KTQ  TP E+A  L  +DELEE H  AAQ GQS+Q+   ++ +NTHFVC + +DG LYELDGRK+ P+ HG +S DTLL+DAC V++QFM RD GE+R    FTIVALA
Sbjct:    7 NERGRNKRWFPLESNPHVMNEYIKRMGIPDDSDFAFCDVYSTEDWAMDMVLRPVLAVVMLFPIKDASESYAKEERARIENEGQVVSDNVYYMKQTVGNACGTVGILHALGNAR--HVLPPRPDSFLATFFAKTQDKTPEEMAAILEADDELEETHASAAQAGQSEQLEHVDDPINTHFVCFSAVDGHLYELDGRKQFPINHGPSSSDTLLEDACGVIQQFMARDKGEVR----FTIVALA 240
[Close]
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Match: W4GMT7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMT7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 7.290e-79
Identity = 137/239 (57.32%), Postives = 170/239 (71.13%), Query Frame = 2 
Query:  119 KRWFPLESNPDVMNKYIAKMGWPAQA-YRFTDVYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPNLYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTPAEIAQALHDEDELEEVHEEAAQQGQSDQIAR-EEKVNTHFVCLTEMDGVLYELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVALAPAVTD 829
            KRWFPLESNP VMN+YI +MG    A + F DVYST+DWAL MV +PVLGVVMLFPIK +TE + ++E  RI++  +  + N+YYMKQTVGNACGTVG+LH   NA     +      FL  F+ KT   TP EIA  L  +DE+EE H  AAQ GQS+Q+   ++ +NTHFVC + +DG LYELDGRKE P+ HG +SP+TLL DAC V++QFM RD GE+R    FTIVALA A+TD
Sbjct:   10 KRWFPLESNPQVMNEYIRRMGIAEDAEFAFCDVYSTDDWALEMVLRPVLGVVMLFPIKPATEDHAKQERERIEKDGQIVSKNVYYMKQTVGNACGTVGILHALGNAR--DYLPPRHGSFLSSFFSKTDGKTPDEIAAILQADDEIEETHASAAQDGQSEQLEHVDDPINTHFVCFSVVDGHLYELDGRKEFPINHGPSSPETLLGDACAVIRQFMARDEGEVR----FTIVALAKALTD 242
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.32.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU79_ECTSI1.190e-16089.15Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A1V9YLF7_9STRA4.210e-8460.26Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achl... [more]
H3H379_PHYRM1.110e-8355.92Ubiquitin carboxyl-terminal hydrolase n=15 Tax=Phy... [more]
A0A3F2RNT3_9STRA5.500e-8154.62Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phyt... [more]
A0A7S1C7C4_9STRA1.040e-8054.37Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bico... [more]
A0A067C1R0_SAPPC5.840e-8056.61Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Sapr... [more]
A0A8K1FQY3_PYTOL6.550e-8053.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UT19_9STRA1.220e-7956.28Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
A0A485KZ13_9STRA1.390e-7957.50Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
W4GMT7_9STRA7.290e-7957.32Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:121987..133726 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LU79
Preferred nameYUH1
PFAMsPeptidase_C12
Model size1544
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K05609,ko:K12584
KEGG ReactionR04368
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000338,GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009987,GO:0010992,GO:0016579,GO:0016787,GO:0019538,GO:0019725,GO:0019783,GO:0019784,GO:0036211,GO:0036459,GO:0042592,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0065007,GO:0065008,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0101005,GO:0140096,GO:1901564
Exons8
Evalue6.51e-166
EggNOG OGsKOG1415@1|root,KOG1415@2759|Eukaryota
Ec32 ortholog descriptionPeptidase C12, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-14_003970.1
EC3.4.19.12,3.6.1.59
Descriptionthiol-dependent ubiquitin-specific protease activity
Cds size777
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002,ko03019,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.32.2prot_P-littoralis_Contig62.32.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig62 122048..133020 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791289.7567372-UTR-P-littoralis_Contig62:121986..1220471680791289.7567372-UTR-P-littoralis_Contig62:121986..122047Pylaiella littoralis U1_48UTRP-littoralis_Contig62 121987..122047 +
1680791289.8585591-UTR-P-littoralis_Contig62:133020..1337261680791289.8585591-UTR-P-littoralis_Contig62:133020..133726Pylaiella littoralis U1_48UTRP-littoralis_Contig62 133021..133726 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791289.7703586-CDS-P-littoralis_Contig62:122047..1221231680791289.7703586-CDS-P-littoralis_Contig62:122047..122123Pylaiella littoralis U1_48CDSP-littoralis_Contig62 122048..122123 +
1680791289.7854676-CDS-P-littoralis_Contig62:123813..1238771680791289.7854676-CDS-P-littoralis_Contig62:123813..123877Pylaiella littoralis U1_48CDSP-littoralis_Contig62 123814..123877 +
1680791289.795394-CDS-P-littoralis_Contig62:127476..1276471680791289.795394-CDS-P-littoralis_Contig62:127476..127647Pylaiella littoralis U1_48CDSP-littoralis_Contig62 127477..127647 +
1680791289.8047636-CDS-P-littoralis_Contig62:127948..1280341680791289.8047636-CDS-P-littoralis_Contig62:127948..128034Pylaiella littoralis U1_48CDSP-littoralis_Contig62 127949..128034 +
1680791289.8139627-CDS-P-littoralis_Contig62:130587..1306671680791289.8139627-CDS-P-littoralis_Contig62:130587..130667Pylaiella littoralis U1_48CDSP-littoralis_Contig62 130588..130667 +
1680791289.8236024-CDS-P-littoralis_Contig62:130876..1309771680791289.8236024-CDS-P-littoralis_Contig62:130876..130977Pylaiella littoralis U1_48CDSP-littoralis_Contig62 130877..130977 +
1680791289.8361745-CDS-P-littoralis_Contig62:132175..1323281680791289.8361745-CDS-P-littoralis_Contig62:132175..132328Pylaiella littoralis U1_48CDSP-littoralis_Contig62 132176..132328 +
1680791289.8467102-CDS-P-littoralis_Contig62:132974..1330201680791289.8467102-CDS-P-littoralis_Contig62:132974..133020Pylaiella littoralis U1_48CDSP-littoralis_Contig62 132975..133020 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig62.32.2

>prot_P-littoralis_Contig62.32.2 ID=prot_P-littoralis_Contig62.32.2|Name=mRNA_P-littoralis_Contig62.32.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=259bp
MAEAGALSAPSPFTSDKGRKRWFPLESNPDVMNKYIAKMGWPAQAYRFTD
VYSTEDWALAMVPQPVLGVVMLFPIKESTEKYREEEAARIKESAEAPNPN
LYYMKQTVGNACGTVGLLHCALNASISKGISLDKDCFLHRFWEKTQQLTP
AEIAQALHDEDELEEVHEEAAQQGQSDQIAREEKVNTHFVCLTEMDGVLY
ELDGRKEGPVPHGSTSPDTLLQDACVVVKQFMHRDPGELRQARVFTIVAL
APAVTDDA*
back to top

mRNA from alignment at P-littoralis_Contig62:121987..133726+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig62.32.2 ID=mRNA_P-littoralis_Contig62.32.2|Name=mRNA_P-littoralis_Contig62.32.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11740bp|location=Sequence derived from alignment at P-littoralis_Contig62:121987..133726+ (Pylaiella littoralis U1_48)
CAAACACTCGCCCCTTTTTCACAATCATATCACCAGGAGCTCTAATTACC
GATCGAAAAACATGGCTGAGGCTGGAGCTTTGTCTGCGCCTTCCCCATTT
ACATCTGATAAAGGAAGGAAAAGATGGTTTCCGCTCGGTGAGGCATGGTT
TTGTGTGCAACATCTACATTGCTACAGCTTGACTGCTATACTGCTGGATG
CTGCTGCTTTCCTGCTGTACTGCTGTGCTCCTGTACCGCTCTTTTATTTT
GCGTTGTGCCACGTGAGACGAAACAGAGAGACACGCACCAACGTCGGCTG
GTCTCTGCCTGTGAATTTGCAGTTCGCAAATCATTCAAACACAATTGCAT
CAACATGCGTCGTACTGAACTACTCCTGTATCATACTGCTGTACAGATAC
TACAGCAGCACAGCAGCACTGCTGTTCGCTTCAACTTAGTCTAGAGCTCT
GTATATGAGATCCCGAGCTAAACCGGAGACAAAGAGGTTCAGCGGCGGGT
ATCGGTAGAACAAATAAGTCTGTCCATTTGGCACAATTTAGTACTTCGAA
GTACCAGGTATATACCGGAGGGTGCGATTTGGTTCACGCTGAAGACCCCG
CATTCAGTCAGCGGCGATTTCGCGCGGTTTGTCTTGTTGACCTTTGGAGC
TCCCAACAAAAATTCTCGAAAAAAAGAAAGATGTTCGTCAGCGTATCATT
TGGCCGAGAGTTTACGAGTTTACCCGTCAATTTGCTACTTTGAATTTTGG
AATGTTTCGAAGAGGGCCCAAAACGTCACGGAAACAGAGCCATCAGAGTA
GAACAGGGTTGGGGGCCGAAACAACGGCTAAAAGATGGCGGTAGGGGCAT
GATCGCGACACGAACGACTTAATTCAGAACTTCGTATTCGTTTCGCCTTT
AAATCCAAGATGAATGGCTCCCTCAATCACTCCAAGACAAAACAGTGGGC
ACGAGAGGTCGCTCAAACACAAATGTAGCCTGCGACGCGAATTAAGCCGA
CGTTTCGAATGATGTCGGCAGAAGACATAACGTATATGTGTATCATAACC
TTCGTACAATTGTAGGCGACATGGTATGTTTTGGCTATACTGTAATAACT
GAGATCTTCTGCTGGGGCAGTGCTATCGGTAGTTGAAGATACGCGGTGCA
GCGGTCGAGAAACTATCCGTATCTCGGCCTGAGATCAAACACCTCACATG
ACCTTCCACTGCTGTACTCGCCGCCATGGGCCCCAATCTCCTGAACTGTG
GCTCTACAGCAGTAGCTTATACCACTTGCTGCCTGGGACGTGCAGTTCCG
AAGATGGGAGCCCACGGCGGCGTGTACTTCATTGGAAGATCATGTAAGAT
GTTTGGTTTCGGGCTGAGATGCGGACGGTTTCTGGACTGATGTACGACGT
GTCTTCGACCACTCATGTCACAGCCCCAGCAGAAGATCGAAGCGTGCCGG
CACACGTGGTCTCTACAAGATATCCTCTGCTGGTATCAATCGTAAGGTTG
GCTTTATCACACGGGAACTCGATTTCTTTGTGGTGATTACTCAACTGGAT
AAGTATCATACCTGGTGGTGGATATTTTTTCAAATTTTAGTAAGGTGACG
GGTCGCATATCAGTCGTTCTCCTTTCAGCAGCGGCAGTACTGCATGTCGC
CAACGAAATTCGTGTGTAATTTATCCTACCTGACACCAAGGACTTCGTAC
GTAAATTAGACCATCCTGCGGGTCTCCATTATTATCCTGCTGCGCTGCTG
TGCTCTATCAGCTGACTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTTT
CTCTCGCTCTCTCTCCCTCTTGATCAGAGTCCAACCCTGACGTGATGAAC
AAGTACATCGCCAAGATGGGGTGGCCAGCTCAAGCATACAGGTCGGTGGG
CCCCCAATCCCTATTAAACGATGATGCCAGCAAGAGCTACAAACTTACAT
TTTACAACAGGGAGACCATGTGTCGTTTACGGAGTGGTAGAGCTTATTCA
GCGAGCTGCTGCTGGAACTGGCTCTATTCCGCCATCAGAGCGGGACGTCT
TGTACTTGCGCGCGAAACGACTTTCCAGAAGTCATCGCTATTGCCGTTCA
TGATGCCCGTCATGTACTTGTATCAGGTAGCATGGGGACGACCCAAGATG
GTGCCGTTCCTTAGGTAACGCCTGGCTACGAAAGGTCTCTACGAGTATCG
TGCGGGCGAAATGAAAAAATACTTCGTTGTTCTACTTGGTGTGTGTATAC
GTGACCTTTTCAGTCAGCGGGGAAGACTCTCGCCAAATGCTGTTCCGATT
ATCGTTTGAGCTCCGTGACCCAGCCAACACGATTCGGCGCTTGTTGTGAC
ATCTGACAGCCCCGCCAAGTTTCAGGCTGTTCAGTGCCTCCCATCTCCAG
TTGGCCGTGAGGTCTCAAGCACCCTGGACAGCTCCAACACCCGTCACCAT
GCGTTTTCATGCTCTTTTTTGTTGGCACCAGCACCGCGAGGTTGGCTATC
TCATGCGACACTACAGTAGATCATCCCACGCGACACTAGAGAATTTGACA
ATGCTGTATATTGAGAGATCGAGTCGAAATTCTGTAAACAGAGCAGGTTT
TTCATCTGAAAAGAATACGTATACGGCAAAATCTGCGGAGAAGCTTGCTG
TATGGTTGTGTGCATCGTCATAAGTCTGTATACGACGGTTGCCGACGCGG
TACTACCCTCTCTTGAGCCAGTCAACCATCAAGAGCGTCGTTACTTCTAC
TCTCGTCTGGGCGAAATAGATGTGTTTACAGCATGATTAGAAAATTGCTT
GTTTGTATATAGACTATTATCATATTCCGTGCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTGATCTGTGGCCAATTCGGCGATCAGCA
CTTCAGCAGCAATGACATAGTCGGGTCGAACCAGCGTTTAACGCACATTA
TCATCGTACTGCAGTTTTTGAGAGAGTATCCTGGATCCGTGCACGCGGAC
AGAGTCAATTTTACCTCTCTCCCCGTTGAGGTTTCGCCGCTGGTCCCACT
GTGGTTATGACCAACCGCTTCTGGTCGCGTGGCCAACCACTCCATCTTCG
GCGACACGTGAAAACTTGGCGAGCTCGATGGATCATCCGTGCTCTTGTCG
GGCAGCCATCTCGGCGGACGCAACCATTCATCGGTCGCAACACAGCATCT
GTGTGCTGCGCGTCGAGTCCATCCATTACTGCGTAGCCTCTCCATGCAGT
ACATCGTTCGTCTTCACTGCTCTCTCAAATACGGTTTGGTCCTCGATAAT
CCTTAATCAATACAGCAACTACAGACGCTTCTTCTGTCAAGCGCGACGGC
CAAAGCGGCCTTCGCGCCATGAAGGCAACACTTCTCACTTTGAGATACTG
TACCGAAGCGCGACCCCGGGGTTGTGAGAATCGAAAGTTTCCCCGGAGGA
AAAAGTTCCCGCGGGGTGTTGTTTCGCGAAACTAGCCATCGACAAGTTGA
GACGCACACCACATACATATCGCTGCCGCCTGTTGAAGCCACATAGCGTC
AACGAAAGAGCATGCATTCATGAACCAGAAGAACACAGACCGTTGAGGCA
TGGAAGCTCGCGGCCTTCGTCTTCCGCATGATACTTAGCTGCGATGACAC
CGACGACGACGACAAAAAACAGGAGGGCCCAAAGAACAAAAACGTGAGAT
TCGCAATCCTCGTGACCTGCTCAACACTCAACTGCCTCGTCACTAGGTCG
ACGGGCCGATGCCCGTTTTTTTTTGTTTTGTAGAGCAGTATACATCTAAA
GATTCTGTTTCTGTCGCATCATTTCCAGAGAAAATTAATCCTTGATTTGC
AGTCTTCAAGCTCTGTGCCGCGCGCCTTGCCCGTGAGGCATTGGTGGGTG
TCTAATCCTCTCCAATGCCAGCCAATGCACTCTACCGTTCGTAGTGTTTC
TTTGGTCGTTCCCGAGGCGGCAGGTAAACGCAAGGAAAACTTCGGCGAAA
ACGAAAGCCTCGGGACGACTCCGTGTACTACTCGACAATTCCACAAAAAA
AAAAAACGGAAGAATTGCTTGTAGCCGCACTGAGGCGATTGTCTCTTTTT
TTTTGTCGGGCCGGGGCACCCTAACGCACACACGCTCTGCCGAATTGTAC
CAAGTTTTATGTCTAGATGTCTAGCTGGAAAGGATTTTTTTCTCTGGACA
TCAGCTCAACTGTGCCAACAGCAGATTTGGCGGGATGACTACTGTAACGC
GGATATTTATGCAAACACTGCGGGGGGCGACAACAGAGATACAACGAAAA
GAGAACCCCCCGAGGCGAAAACAGATACCACAAACGTCGAGAGGCGGTAT
TTCCAAGTGAACGGGACGCGCCGAGCGTCCAAATACTCTCGGGTACGCAG
ACCGTGAAATGCGGGGGCGTGGGTCACGCGGGGCGGCGTTCCCAGAGGAC
ATTGTTACGGTACGAGGAGGCCCCACCCACCCACAACGACTCCGACTTCA
CCTATTGTCACTGTGAAATACCACCGCCACGAGCAGCGACAGCAAATTGC
AAACTGCCGGAAACGATACCACAGAAACCTCTGTGCTTACCCCTGGGGGC
AGACGAGAATTTTCTGCGGGAAAACATGGTCCCGGCGCTAAAGGAGAAGT
GTTATCAGCACAAAAACTTTACCGCGGGGCTTGGACGACGTGTTAACAAC
TTGTTAGCGATCGTTTTGGGGTGCAGGCTCTTGGAATACCACGGTACACC
AATGGGTATGAGGTGGCACGCTCAACAGGACATCCACAGATTTTTGTGCA
TCTCCCGTTTGCTCTCTCTCACTCTCTCACTCTCTCTTGCCGATCTCGTC
AACAAAATGAAACGGACTCTTTCCGCCAGTATCACCAAAGCACAGTAGTC
GAGCATCTCGTATCACATCTACGGCACACCTCCTGAGATGGTTTATGCGC
GCGTGAGGCCCTAGTAGCCGGGCAGAGAACGAGTCCATGAGCATCTATGT
ACACGTCCAATAACAGTAACTTTAAAGTTTGAATATTCAACACCAACTGG
AGAATAGCGAAACATTTTATCTTGGAGCCAGCCGGGTAGAGCCAAAGTAG
GACACCCGACACACTTCAACAGTGCAAATCATAACAGCAGTAACGTCCCG
GCAGTCCCTGTGCACGCGCGCACCTCTGGCTTGTGGTTCGTTGGTTTGTT
GGCCACCCGCACGAGAATCGCGACACACTCTGATCACACTGTCGTCTTTA
GCAATACGAGTATTTTGCGTGGCCGTTCTAAACTGGCAGAATCATGTCTA
AAGGTCTGCAAATCCTCCACGACGCAACAATGGCTCCATCTCCCGCCTTT
CGTGGTCGAAAGCTGTGATGACGATTAGTCAGGTAAGGTCCGCAAACACG
TGTACACAGCACGGAGTTCATCCCAAAGAATGCATCTCACACCCACAACC
GTCGACCGCCGCCGATGCAACTTAAATCGCCGCCGATTAGGTTTACAGAC
GTGTACAGCACCGAGGACTGGGCGCTTGCGATGGTGCCCCAGCCGGTCCT
GGGCGTGGTGATGCTGTTCCCGATCAAGGAGTCAACGGAGAAGTACCGGG
AGGAGGAAGCGGCGCGGATCAAGGAGTCTGCAGAGGCGCCCAACCCCAAC
TTGTACTACATGTGAGAAGCGTTGATGCGCTTTTTAAACTGGCTCCTTCC
AACCCGGGGCACGCACGAACCATTATGCCAGCTCTGTGGCCGGTGGCAAT
GCCTCCGCTCTTTCCTCGTCTCTCGTGCATTCACCCGCATTGCTGCCCTG
TGTCGCGTCAGCTCCTCCTGGCGCGTTGCTTCATATGTTGTATCCCTGCT
TCCCCTTTGATGGAGCGTATCAGGGAGCTGGTTTTTTCAATGCTTTTCGT
GGATGGTGTTTTCATTGCACCCCCCTCCTTCTTTCATGGGATGTTTTGAC
TTTTCGCTCCAGGAAGCAAACGGTGGGGAACGCCTGCGGGACTGTCGGGC
TTCTTCACTGTGCGCTTAACGCCTCTATCTCCAAGGGGATTTCCCTCGGT
AAGCCGAATATCGTACCCGTTTCAACAATTATCTACATGTGTATGTATTC
ACGTTTCGGAGTGTCTTTTTTTAGCACAGTTCACCGGTCGCCCCGGTGAG
TCTGTGGTTCCCTCGTTAACCTACTAGTTGTAATGTCGTAGGTTCGATTT
TCTCTGAGAGCGTTTCTTGCGACTTTACTACAGTGGAAAGGGAATTACTC
GTGAGTAAACATAGGGAAGGGATTGCTGTACCTGACTCGCATTAGAAACC
AATGGCCCGTACCGCAGGAGGAAAGTTTGGGCAATAAAACAAAAAAAGGC
CGTTTGTGACCTTCCTTTTGTGTGACCCCGGCTGATGCACCCACTTCATA
CCGAAAGGTGTAGACTGTTGCCCAGAATAAATGGGATGACAACACACACA
ACAGTGTCACGGGCGCGGGTCGGAAGAAAAACATTTTGATGCACTTGGGG
AATCATGAGTCACCGTGATGGATGTCTTCTGCGGGCGACAGCGTTGGTAG
TGCAAACAGAAACATTTTGATTGCAAGGGGGACTTGGAGAATAGTTTCAT
GTGGTGGGTCAGGCGCGCTGAAGAGAAACTACTGCCAGCGACAACGACCT
CTATGATCAGCTCGTACAGCTTCTCAGCGGCTTAATGTTGACCTTTCTTG
ACAATATCCTTTTCTGTTATTTGTAGTGTACACCGCTTTTTCAGCACACT
CTTCGTTGATTGTAAACTCATATTTTCAGATACGTACATTTTACCCCATG
TAGAGGATTCGGTGCCACAACTTCTTACCTCTTGCGTGCTTGTTGTTCTA
CTTTGTTACCGCTTTATTTTCTCTTTATTTTACATGAGTACATACCACGC
TCAATTTTCTTTTGTTTCCATGTAAAAAGTCCATTTTGCCTCGATGATTT
TACGGCCATTAAAGACAAATCAAAAACAATGTGGGTTGTCTGGTTTACGT
TGCCTCTTTTTTTCGACACCCCATTCCTGTTTTGTTGCACACGTGGTACA
GTATTCAACTGCTGCTGTTCCACCACACCGCACACATTCTTCGTAAGCGT
TGACGCTTGAAAAGTGAAAAGAGAGACCCGCGACATCTGATGTATAGAGT
TCCACTCTCCGCTAAACATTATCCTCGTGCTTCGTAAGTTAATACCACCA
CCGCATTTTGTCTGTCGAAAATCCTTGTTTTATTCAAAGCGCGCACACCT
CACGCCGTTTGATTCACTGAAGCCTGCGCATCGTAGCAGAATTGTCAATC
GGGTGCTGCTAGGTATCCACACAACGAGTCAGGTGCCGCTGCACACTCTC
ACAAATATCTGTGAGATGGTTGCGGCACAACACATGTTGCTTTGCACAAA
AGCGTCTAGATAGCGACCGGGCGAATTCACGAGGCAAATGTCGTACTGTA
CCTACGGCAAGAGTCGTGAGAGAGGCGGCGGGCAGTAGGAGATCAGACTT
GTCGCGACGGGTGTGACAAGATGTAGAGCGCGGGTGTGTTGGATGGGGGA
AGAAAATGCTTGAGGAGACGAAACCAAACGTTGATTACTTTCATGGTTGA
GAGATCTGGAATCGGCTTGGGGGGGGGGGGGGGGGCATTTACAAAACTGA
GTTTACGCCGTGCTGTTGGATACCAGAAAGGGTTGTGTGTCTCGCGTCGG
TTTACACTATCTCCTTACGTTCCTTTTCATGCATGCGTACAGAATTAACT
TCAAGGGCGTAGAAAAAGTCGACTTGACGGCGCGCACCCCTTTGTGTTCA
CAAGCCAGGGGGTGGTATCCGTTCATTGAAAAAATCATGGCAAGAAAAAT
AATGTACGAACAATACGTTCCCCTTTTCTTGTCTAGTACTGCTGTGGTGC
AGACCATGCCATTCACATCACACCAGCAGCAGCAGCAAAACATGGAACAC
GCACGACGTGCAGATTTCAGCAGCAGAGCACGTTCTTCGTTCGCTCCGCA
GAAGCAGACCTTGACACGCAAATCACGGTATGAAGTACAGACCACAGCAG
CAGACCACGTCCTTTGTCTGCGAGGTTGTGGGAATTGGTTGATATTTGTA
AATAGTAGTGTGTGTTGAACAGGCGCCGCGATGCCAAAATTGCGGGCTCG
TGGTGACTGGTGGACATTCACAAGAAGTAGCGTGTGGAACGTGGAACGAC
GCGAAAAAAACGCACTAAATATTGTACTGTACTTCGAAGTTCCTATTTTT
GTGTCTGAATGCAGAGCAGATACCCCCTCTTTGTGTCGAATACCCCTTCT
TTTTTTCAGAACATCAGGAGATCCCGCGCAAGGGGCACGCTAACCCGGTA
GAAAGTCCCGTGAAGAATATTATATTGCACTAAGTGGGGCTTTGGAAAAT
ATGTGGTGGAGGCTCACTGGACACGCGGTCGGCAATTGGTATCGCTACTA
TTCCTGCGCTACAAGTTCCGATGTCACCCGCATGCCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTACCAACAAACGTCTTCCCTTGTGCCACCGCACGGCGTGGAA
GACAAGGACTGTTTTCTGCACCGGTTTTGGGAGAAGACTCAACAGCTAAC
GCCGGCCGAGATCGCTCAGGCCCTCCACGATGTGAGAGTAAACCCCAACC
ACCAGTTTTGTTGGCATCCCGTATTTTTCGCCTCCCTGTCCCTCAACAAT
CGTATATCGTCAGACCTACTTTTTGGTCTGTCATGTTGTCGTATGTGTGA
TAGGCATACTTTAAGTATGTTTTCGTTCGAGGTCATTCATTAGTACTTAC
AATTCTTCATTTGCCCATCGTGTTGTTTTTGGTGCCAAAGGAGGATGAGC
TAGAAGAAGTGCACGAGGAGGCTGCTCAACAGGGCCAGAGCGACCAGATC
GCCCGCGAGGAGAAGGTCAACACACATTTTGTGTGTCTCACGTGAGTCAG
CCGATGCCCCACGGGGGGGAGGGAGGCTACTGTTGGACTCCACATCATAC
GGATAGGAGCTGTTTTTTACTGCGAGATCATGGTGTCCTGCAGAGGGGGA
GGGCATTCGTCGGCACCTCCTTCTTGTGTCACGAAGCATTGTGACATCAT
TCGTCTCGCACCTCAGCACCACCACCTGTACTGCTGCTGCCGCATGCAGT
TGCGCACAAGCATGATGTGTGTGTCTATCTGCTGTCTCTTCTGTCTTTAG
ACTCTACCAAATGTCGAGTAATTGCTGTTGGTGGTATGTAGAGGTCTGGT
GTAGTTGTACATTGACATGACTTCAGCAGCAGCGAGGAGAGCTGTGTGCA
TGCCCGTGGCGGCTTGTAGTGTGGTGTCCTCCTCCTGCTGCTGCTGCTGC
GGCTCCATCTATGTCAGTAATCGCGAAGTTGTGTGTTCGTGCGTGGTGTG
TGTTGCTCCGCTCAACACGAACAGTAATACACCAATTGTGAGACAGCAGC
AGCACCTGTCCAAGACCACCGAGTAGACCATGAATGCACAATATCGCAAC
AGTGTGTGTGATGTTTCGCCAACTTTGGTTTCAATTAAATGCGAAATCAT
TTTTATGTGGGAAGTTGGATTTAGACAGTGATATGCATGTAAAGAGAAGC
CCCCGCCGCCGCTGTGTGCGGTAACCGACAGTTTTCCTCTTTCCCGACAC
CTTCCTACTGGTGTGAGGTATCTAGTGTGTGATTGTCAGGGCCCGTTCGC
TGTTTTTCAAAATACGTGCATCTCAACGACCTCTTGTCCCCGGATCCTTG
AGACGGGAAGATCCGCGCGTGTTTCAGGTGTGGAGCTCATTTCCCCTCAT
TTCACCCAATCATAGGATGTGTTCTTTGGATATTTGGGGCTTTTGGTTTC
GATGATCGGCATTGATTTCCGATTAAGACCCAGCCTAAGGCTTGTACCTA
GAGCGGCGATCCAAAAATACGAAAAATACCGGTTTAGGTTGAAAGTCGGC
TACATGTCCGTTTCGTTGTGAAAGTCAGACACAGTTTGTTTTATCTTCCT
TTTATACAGTATCGCTCTCCGCGGATACAACCAACGACAAAGACGGCGTC
ATGTTTGTGTTCACGTCGAAATAGTTCCATTGCCCCTGACCTCAAATATT
TGGCGCGCAACGCCGTATGTTTTTCCCCATTTTTTTCAGGGAAATGGATG
GCGTTTTGTACGAGCTGGATGGGCGCAAAGAAGGCCCCGTGCCGCACGGC
TCAACGTCACCAGACACGCTCTTACAAGACGCGTGCGTGGTTGTGAAGCA
GTTCATGCATCGAGACCCGGGCGAGCTAAGGCAAGCGCGCGTGTGTGTGT
ATATACAAACTGGATTTCAGATTTGCGCACACACTGTCGCATGTGTGAGC
GCAGTTTTTTATATTGTTTTTTCCGTGATGTGCGCGTCCTTAAGAGGGTA
GACATTGCGATCAATAGGCTGTCGTAAATTTGTTGAATCGGATCGTTTGA
GAATCCTCCCTAAGGAATTCTTATTTACACGTGAGGTCATCGTTTTCCAA
ATGGGAGGAGCATACGCTGCATGTGTTTTGTCGAGTCGACTTCGCGCAGA
AGAAAGGGCGGCATCTCAGATTTCCGTCACGCATTGTGATGTGGAGCATG
CCATCGACTTCGACAGTATAATTCCATCGCGCGATTATCCGCTTCGATTT
TGCGGGACATCACAGCTTGAGCATAGCAGTGGGTGACCGCTACGTTGACT
CACCCCAGAGAACCAAATTGGGTTGCACGATGGTCTGCTGTAGTAAGATG
AGAGACGCGTTTCATCTCATATCCCACACGATCTGGTACTCAGAACCCGT
ACAAGTATACATGTGGTATCAACAGTCAACATCGCTGCTAAATTGCGTCT
CTTGGCCAGGCGTTCAAAACTTCTCTCAACAACAGTGGCGTGCCGTAGTC
TTTAAACATTCATTTAACCCCCTTGCGCCAACGCGCAGGTTCACCATCGT
GGCTCTGGCACCGGCCGTGACGGACGATGCATGAGACGACGGTGATGATG
TGACAAGACAGACTCTGCGCGATGCGCAGTGTTGCACCTCGTCTCCGTGA
TACCGTTTGCCGCTCAACGGTACAAGAGCGGTCGGACTCGAGTCTAGAGT
ACATGGAAGCGCTGGTGTCTCATACACGAGTCCCGTGATGTGTGCGCGCA
CTGATTTAGAAATTGAGAATGCCGTCAGAATAACGCGTCCGTTTGGTGGG
GGGTTTTGCCCTGGTTGCACTCATGAATGATCGGTGTAAAGCAATCACGA
AATACTTCGTGCGCGCTTCCGTCCCCATCCTTTGCCAAGGCGTGAGCGAA
GTTGCAAAGGGCGAGTTCGTGCCCTTCCGGCCGACGGCAACCACCGCCAA
CGACAAAATCAACTTCGCAAATTCCAGCGATCTGTGGTCGCGACACTGTT
CGTACCAAACAGAAGGCTCTGGGCGTGTCATTTGGATCCACCAGTGAGGA
TGTAGCTGAAAGGAGCTCCGTGCAACCCCACTGTTGAACGCATGATGGCG
AAACCGCCTATCGTCCCAAACTTCCGGCCCCTGCGTACGCCTCTCTCTTC
ACTTTTTTGTGTACGAAGTGCCCCGATTCTTTGCTCGAGATGTGCGCAAT
GCATGTATTTCCAACTCTCTGAGGATCTGATTTTTTAGCAGGGCTAATAG
AAAAACACAACACAAATTTGACCCCGCATGACAAATCGTA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig62:121987..133726+

>mRNA_P-littoralis_Contig62.32.2 ID=mRNA_P-littoralis_Contig62.32.2|Name=mRNA_P-littoralis_Contig62.32.2|organism=Pylaiella littoralis U1_48|type=CDS|length=777bp|location=Sequence derived from alignment at P-littoralis_Contig62:121987..133726+ (Pylaiella littoralis U1_48)
ATGGCTGAGGCTGGAGCTTTGTCTGCGCCTTCCCCATTTACATCTGATAA
AGGAAGGAAAAGATGGTTTCCGCTCGAGTCCAACCCTGACGTGATGAACA
AGTACATCGCCAAGATGGGGTGGCCAGCTCAAGCATACAGGTTTACAGAC
GTGTACAGCACCGAGGACTGGGCGCTTGCGATGGTGCCCCAGCCGGTCCT
GGGCGTGGTGATGCTGTTCCCGATCAAGGAGTCAACGGAGAAGTACCGGG
AGGAGGAAGCGGCGCGGATCAAGGAGTCTGCAGAGGCGCCCAACCCCAAC
TTGTACTACATGAAGCAAACGGTGGGGAACGCCTGCGGGACTGTCGGGCT
TCTTCACTGTGCGCTTAACGCCTCTATCTCCAAGGGGATTTCCCTCGACA
AGGACTGTTTTCTGCACCGGTTTTGGGAGAAGACTCAACAGCTAACGCCG
GCCGAGATCGCTCAGGCCCTCCACGATGAGGATGAGCTAGAAGAAGTGCA
CGAGGAGGCTGCTCAACAGGGCCAGAGCGACCAGATCGCCCGCGAGGAGA
AGGTCAACACACATTTTGTGTGTCTCACGGAAATGGATGGCGTTTTGTAC
GAGCTGGATGGGCGCAAAGAAGGCCCCGTGCCGCACGGCTCAACGTCACC
AGACACGCTCTTACAAGACGCGTGCGTGGTTGTGAAGCAGTTCATGCATC
GAGACCCGGGCGAGCTAAGGCAAGCGCGCGTGTTCACCATCGTGGCTCTG
GCACCGGCCGTGACGGACGATGCATGA
back to top