mRNA_P-littoralis_Contig62.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig62.3.1
Unique NamemRNA_P-littoralis_Contig62.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A0P6RNR4_9RHOB (Type II secretion system protein E n=205 Tax=root TaxID=1 RepID=A0A0P6RNR4_9RHOB)

HSP 1 Score: 576 bits (1485), Expect = 1.830e-206
Identity = 295/325 (90.77%), Postives = 311/325 (95.69%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGTSEIG 975
            MSLSYL+TSLD++DAAARDDVIEICINPDGTCWGEFQGDHFMR LDQ LT T+VKDLGNQIASSANTTMSKDRPIVSVSI YK RPIRAQVITPPAVLSAMSISLRFFS+LPLE I+L FL+GKERKLEELR EK ++LREVVA+GVIDDALAFCVENKLNM+VSGGTSTGKTVAARKILSHVP+EERI+TIEEAAELLP QPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADM++YIENSIDVIIQAGRHDG RGITEFYLPG  + G
Sbjct:    1 MSLSYLQTSLDKLDAAARDDVIEICINPDGTCWGEFQGDHFMRLLDQSLTETEVKDLGNQIASSANTTMSKDRPIVSVSIGYKDRPIRAQVITPPAVLSAMSISLRFFSSLPLENIELSFLFGKERKLEELRQEKTKQLREVVASGVIDDALAFCVENKLNMVVSGGTSTGKTVAARKILSHVPAEERIITIEEAAELLPDQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMVRYIENSIDVIIQAGRHDGARGITEFYLPGMEQTG 325          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: UPI000829CFE9 (Flp pilus assembly complex ATPase component TadA n=1 Tax=Pseudoruegeria marinistellae TaxID=1739787 RepID=UPI000829CFE9)

HSP 1 Score: 570 bits (1468), Expect = 6.850e-204
Identity = 293/321 (91.28%), Postives = 308/321 (95.95%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGT 963
            MSLSYL+TSLDRI+ AARDDVIEICINPDGTCWGEFQGDHFMR LD  LTAT+V+DLGNQIAS+ANT+MSKDRPIVSVSITY+ RPIRAQVITPPAVLSAMSI LRFFS+LPL+GI+L FLYGKER+LEELRLEK RELREVVA+GVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVP++ERIVTIEEAAELLP QPN VTLIANRD E+QTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGR DG RGITEFYLPGT
Sbjct:    1 MSLSYLQTSLDRIEDAARDDVIEICINPDGTCWGEFQGDHFMRVLDSTLTATEVRDLGNQIASAANTSMSKDRPIVSVSITYRDRPIRAQVITPPAVLSAMSICLRFFSSLPLDGIELGFLYGKERRLEELRLEKTRELREVVASGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPADERIVTIEEAAELLPHQPNTVTLIANRDTEYQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGREDGARGITEFYLPGT 321          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A0F9U8C4_9ZZZZ (T2SP_E domain-containing protein n=11 Tax=root TaxID=1 RepID=A0A0F9U8C4_9ZZZZ)

HSP 1 Score: 554 bits (1427), Expect = 1.250e-197
Identity = 283/327 (86.54%), Postives = 307/327 (93.88%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGTSEIGAS 981
            MSLSYL+TSLD++DAA+R+DVIEICINPDGTCWGEFQGDHFMR LDQ LT T+VKDLGNQIASSANTTMSKDRPIVSVSI YK RPIRAQVITPPAV++AMSISLRFFS+L L+ I+L FL+GKERKLEELR +K ++LREVV AGVIDDALAFCVEN+LNMIVSGGTSTGKTVAARKILSHV +EERI+TIEEA+ELLP QPN VTLIANRDA  QTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADM++YIENSIDVI+Q GRH+G RGITEFYLPG  +IGAS
Sbjct:    1 MSLSYLQTSLDKLDAASRNDVIEICINPDGTCWGEFQGDHFMRLLDQSLTETEVKDLGNQIASSANTTMSKDRPIVSVSIAYKDRPIRAQVITPPAVMAAMSISLRFFSSLSLDKIELSFLFGKERKLEELRQQKTQQLREVVTAGVIDDALAFCVENRLNMIVSGGTSTGKTVAARKILSHVGTEERIITIEEASELLPAQPNVVTLIANRDAVSQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMVRYIENSIDVIVQTGRHNGARGITEFYLPGMEQIGAS 327          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A0A0E9X4_9RHOB (Type II secretion system protein E n=34 Tax=Bacteria TaxID=2 RepID=A0A0A0E9X4_9RHOB)

HSP 1 Score: 551 bits (1420), Expect = 1.690e-196
Identity = 285/325 (87.69%), Postives = 305/325 (93.85%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGTSEIG 975
            M+LSYL+TSLD++  AARDDVIEICINPDG+CWGEFQGDHFMRALDQRLT T+V+DLGNQIASSANTTMSKD+PIVSVSITY+GRPIRAQV+TPPAVLS MSISLRFFS+LPL+ I+L FLYG+ERKLEELR EK R LREVVAAG I  A+ FCVENKLNMIVSGGTSTGKTVAARKILS+VP EERIVTIEEAAELLP QPNAVTLIANRDAEFQ+ADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTY DM+QYIE+SIDVIIQAGR DG+RGITEFYLPGT   G
Sbjct:    1 MTLSYLQTSLDKLKDAARDDVIEICINPDGSCWGEFQGDHFMRALDQRLTVTEVRDLGNQIASSANTTMSKDKPIVSVSITYRGRPIRAQVVTPPAVLSGMSISLRFFSSLPLDHIELRFLYGEERKLEELRQEKNRALREVVAAGDIYAAIRFCVENKLNMIVSGGTSTGKTVAARKILSYVPDEERIVTIEEAAELLPAQPNAVTLIANRDAEFQSADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYQDMVQYIESSIDVIIQAGREDGQRGITEFYLPGTDLSG 325          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A3U051_PSEBH (VirB11 protein n=3 Tax=Rhodobacterales TaxID=204455 RepID=A3U051_PSEBH)

HSP 1 Score: 544 bits (1401), Expect = 1.180e-193
Identity = 276/321 (85.98%), Postives = 304/321 (94.70%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGT 963
            M++SYL+ SLD++  AARDDVIEIC+NPDG+CWGEFQGDHFMRALD RLT T+++DLGNQIASSANTTMSKD+PIVSVSI Y+GRPIRAQVITPPAV+S MSISLRFFS+LPL+ I+L +LYGKERKLEELR +K R LREVVA+GVI DA+ FCVENKLNMIVSGGTSTGKTVAARKILS+V +EERIVTIEEAAELLPTQPNAVTLIANRDAEFQ+AD+LLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTY DM+QYIE+SIDVIIQAGR +G+RGITEFYLPGT
Sbjct:    1 MTVSYLQASLDKLKDAARDDVIEICVNPDGSCWGEFQGDHFMRALDDRLTVTELRDLGNQIASSANTTMSKDKPIVSVSIAYRGRPIRAQVITPPAVISGMSISLRFFSSLPLDEIELRYLYGKERKLEELRQQKNRTLREVVASGVITDAIRFCVENKLNMIVSGGTSTGKTVAARKILSYVSAEERIVTIEEAAELLPTQPNAVTLIANRDAEFQSADILLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYQDMVQYIESSIDVIIQAGREEGQRGITEFYLPGT 321          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A2R8CFX1_9RHOB (Type IV secretion system protein VirB11 n=1 Tax=Falsiruegeria mediterranea M17 TaxID=1200281 RepID=A0A2R8CFX1_9RHOB)

HSP 1 Score: 538 bits (1387), Expect = 1.790e-191
Identity = 273/325 (84.00%), Postives = 301/325 (92.62%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGTSEIG 975
            M+LSYL+ SLD++  AARDDVIEICINPDG+CWGEFQGDHFMRALDQ LT T+V+DLGNQIAS+ANTT+SKD+PIVSVSITY+ RPIR QV+TPPAVLS MSISLRFF NLPL+ I+L FLYG+ERKLE LR EK R LR+VVAAG I++A+ FCVENKLNMIVSGGTSTGKTVAARKILS++P EERI+TIEEAAELLP+QPNAVTLIANRDAEFQ+ADVLLTATLRMRPDRIILGEVRGKEAMTF+EAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTY DM+QYIE+SIDVIIQAGR +G RGITEFYLPGT   G
Sbjct:    1 MTLSYLQASLDKLTDAARDDVIEICINPDGSCWGEFQGDHFMRALDQHLTVTEVRDLGNQIASAANTTLSKDKPIVSVSITYRDRPIRTQVVTPPAVLSGMSISLRFFPNLPLDQIELQFLYGEERKLEALRQEKNRALRDVVAAGDINEAIGFCVENKLNMIVSGGTSTGKTVAARKILSYIPGEERIITIEEAAELLPSQPNAVTLIANRDAEFQSADVLLTATLRMRPDRIILGEVRGKEAMTFIEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYQDMVQYIESSIDVIIQAGRENGERGITEFYLPGTRNNG 325          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A7S9LVN5_9RHOB (Flp pilus assembly complex ATPase component TadA n=1 Tax=Pontivivens ytuae TaxID=2789856 RepID=A0A7S9LVN5_9RHOB)

HSP 1 Score: 518 bits (1334), Expect = 1.890e-183
Identity = 267/321 (83.18%), Postives = 294/321 (91.59%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGT 963
            M+LSYL+ SLD++  AARDDVIEICINPDG+CWGEFQGDHFMR L Q L+AT+++DLGNQIAS ANTT+SKD+PIVSVSITY+ RPIRAQVITPPAV + MSISLRFFS+LPL+ I+L +LYG+ERKLE LR +K R LREVVAAG I  A+ FCVENKLNMIVSGGTSTGKTVAARKILS+V  +ERIVTIEEAAELLPTQPNAVTLIANRD EFQ+A+VLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTY DM+ YIE+SIDVIIQAGR  G+RGITEFYLPGT
Sbjct:    1 MTLSYLQASLDKLADAARDDVIEICINPDGSCWGEFQGDHFMRRLGQTLSATELRDLGNQIASGANTTLSKDKPIVSVSITYRQRPIRAQVITPPAVSNGMSISLRFFSSLPLDEIELQYLYGEERKLESLRQDKNRALREVVAAGDIYTAIRFCVENKLNMIVSGGTSTGKTVAARKILSYVADDERIVTIEEAAELLPTQPNAVTLIANRDMEFQSANVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYQDMVTYIESSIDVIIQAGRESGKRGITEFYLPGT 321          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A166SN78_9RHOB (Type II secretion system protein E n=1 Tax=Sulfitobacter sp. HI0023 TaxID=1822225 RepID=A0A166SN78_9RHOB)

HSP 1 Score: 516 bits (1329), Expect = 1.220e-182
Identity = 266/321 (82.87%), Postives = 294/321 (91.59%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGT 963
            M+LSYL+ SLD++  A R+DVIEICINPDG+CWGEF GDHFMRALDQRLT TD++DLG+QIASSANTTMSKDRPIVSVSITY+GRPIRAQVI PPAVLS MSISLR+FS+LPLE I+L +LYG+ERKLE LR E+ RELREVVA G I +A+ FCVE+KLNMIVSGGTSTGKTVAARKILS V ++ER+VTIEEAAELLP QPNAVTLIANRD+  Q+AD LL ATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKT IPMTY D++QYIE+SIDVIIQAGR DG+RGITEFYLPGT
Sbjct:    1 MTLSYLQASLDKLSCATREDVIEICINPDGSCWGEFHGDHFMRALDQRLTDTDLRDLGSQIASSANTTMSKDRPIVSVSITYRGRPIRAQVIMPPAVLSGMSISLRYFSSLPLEQIELRYLYGRERKLEVLRQERNRELREVVAGGDIYEAVRFCVEHKLNMIVSGGTSTGKTVAARKILSLVSADERVVTIEEAAELLPEQPNAVTLIANRDSAGQSADTLLAATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTGIPMTYQDIVQYIESSIDVIIQAGREDGQRGITEFYLPGT 321          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A7Y2IXN8_9RHOB (Flp pilus assembly complex ATPase component TadA n=7 Tax=Rhodobacterales TaxID=204455 RepID=A0A7Y2IXN8_9RHOB)

HSP 1 Score: 508 bits (1309), Expect = 1.210e-179
Identity = 262/321 (81.62%), Postives = 289/321 (90.03%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGT 963
            M+LSYL+ S+D+++ A RDDVIEICINPDG+CWGEFQGDHFMR LDQ LT   +KDLGNQIAS A+T +SKDRPIVSVSITY+ RPIRAQVITPPAV   MSISLRFFS+LPLE I+L FLYG+ERKL+ELR EK R+LR+VV +G ID A+  CVENKLNMIVSGGTSTGKTVAARKILS+V  EERI+TIEEAAELLP QPNAVTLI+NRDA  QTADVLLT+TLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTE+P+ Y DMI YIE+SIDVIIQAGR DG+RGITEFYLPGT
Sbjct:    1 MTLSYLQASIDKLEDAKRDDVIEICINPDGSCWGEFQGDHFMRRLDQTLTEDQIKDLGNQIASDASTPLSKDRPIVSVSITYRDRPIRAQVITPPAVSRGMSISLRFFSSLPLETIELRFLYGEERKLDELRQEKNRQLRDVVVSGDIDAAIHHCVENKLNMIVSGGTSTGKTVAARKILSYVSDEERILTIEEAAELLPKQPNAVTLISNRDAINQTADVLLTSTLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEVPIPYRDMIDYIESSIDVIIQAGREDGKRGITEFYLPGT 321          
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Match: A0A1G7UPG6_9RHOB (Type IV secretion system protein VirB11 n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A1G7UPG6_9RHOB)

HSP 1 Score: 483 bits (1242), Expect = 2.050e-169
Identity = 246/320 (76.88%), Postives = 280/320 (87.50%), Query Frame = 1
Query:    1 MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPG 960
            M+ SYL+ SLD++  A R+DVIEICINPDG  WGEFQGDHFMR LD  ++ T+++DLGNQIAS ANT + K++PIVSVSI Y+GRPIRAQVI PPAV +  SISLRFFS LPLE I+L +LYG ER LE +R E+ RELR+VV +G I  A+ FCVENK+NM+VSGGTSTGKTVAARKILS+V  +ERIVTIEEAAELLP QPN VTLIANRD E Q+AD LLT+TLRMRPDRI+LGEVRG+EAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKT++PMTYADMIQYIE+SIDVIIQAGRH+G RGITEFYLPG
Sbjct:    1 MTSSYLQASLDKLPDAMRNDVIEICINPDGRVWGEFQGDHFMRLLDASMSQTEIRDLGNQIASGANTRIGKEKPIVSVSIEYRGRPIRAQVIQPPAVQTGHSISLRFFSTLPLEKIELKYLYGAERSLEGVRQERNRELRQVVKSGDIYAAIKFCVENKMNMVVSGGTSTGKTVAARKILSYVGEDERIVTIEEAAELLPNQPNVVTLIANRDVETQSADTLLTSTLRMRPDRIVLGEVRGREAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTDVPMTYADMIQYIESSIDVIIQAGRHNGDRGITEFYLPG 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P6RNR4_9RHOB1.830e-20690.77Type II secretion system protein E n=205 Tax=root ... [more]
UPI000829CFE96.850e-20491.28Flp pilus assembly complex ATPase component TadA n... [more]
A0A0F9U8C4_9ZZZZ1.250e-19786.54T2SP_E domain-containing protein n=11 Tax=root Tax... [more]
A0A0A0E9X4_9RHOB1.690e-19687.69Type II secretion system protein E n=34 Tax=Bacter... [more]
A3U051_PSEBH1.180e-19385.98VirB11 protein n=3 Tax=Rhodobacterales TaxID=20445... [more]
A0A2R8CFX1_9RHOB1.790e-19184.00Type IV secretion system protein VirB11 n=1 Tax=Fa... [more]
A0A7S9LVN5_9RHOB1.890e-18383.18Flp pilus assembly complex ATPase component TadA n... [more]
A0A166SN78_9RHOB1.220e-18282.87Type II secretion system protein E n=1 Tax=Sulfito... [more]
A0A7Y2IXN8_9RHOB1.210e-17981.62Flp pilus assembly complex ATPase component TadA n... [more]
A0A1G7UPG6_9RHOB2.050e-16976.88Type IV secretion system protein VirB11 n=4 Tax=Rh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:2622..3608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1461694.ATO9_23285
Preferred namevirB11
PFAMsT2SSE
Model size987
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02283,ko:K03196
KEGG TC3.A.7
KEGG Pathwayko03070,ko05120,map03070,map05120
KEGG ModuleM00333,M00564
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.17e-220
EggNOG OGsCOG0630@1|root,COG0630@2|Bacteria,1QUJ6@1224|Proteobacteria,2TW2D@28211|Alphaproteobacteria,2PCYB@252301|Oceanicola
DescriptionType II/IV secretion system protein
Cds size987
COG categoryNU
BRITEko00000,ko00001,ko00002,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791289.4286802-CDS-P-littoralis_Contig62:2621..36081680791289.4286802-CDS-P-littoralis_Contig62:2621..3608Pylaiella littoralis U1_48CDSP-littoralis_Contig62 2622..3608 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.3.1prot_P-littoralis_Contig62.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig62 2622..3608 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig62.3.1

>prot_P-littoralis_Contig62.3.1 ID=prot_P-littoralis_Contig62.3.1|Name=mRNA_P-littoralis_Contig62.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bp
MSLSYLETSLDRIDAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLT
ATDVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSA
MSISLRFFSNLPLEGIKLDFLYGKERKLEELRLEKARELREVVAAGVIDD
ALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLP
TQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEA
INTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDV
IIQAGRHDGRRGITEFYLPGTSEIGASQ*
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mRNA from alignment at P-littoralis_Contig62:2622..3608-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig62.3.1 ID=mRNA_P-littoralis_Contig62.3.1|Name=mRNA_P-littoralis_Contig62.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig62:2622..3608- (Pylaiella littoralis U1_48)
ATGTCGCTGAGCTATCTCGAAACCTCGCTCGACCGGATCGACGCCGCTGC CCGCGACGATGTCATCGAGATCTGTATCAACCCCGACGGCACCTGCTGGG GCGAGTTCCAAGGCGATCATTTCATGCGCGCACTGGATCAGAGGCTGACC GCGACAGACGTGAAGGACCTCGGCAACCAGATCGCCTCTTCAGCCAATAC CACCATGAGCAAGGACCGCCCTATCGTCTCGGTCTCGATCACCTACAAGG GCCGCCCGATCCGCGCCCAGGTCATCACGCCGCCCGCGGTGCTCTCCGCG ATGTCGATCAGCTTGCGGTTCTTCTCGAACCTGCCGCTCGAGGGGATCAA ACTCGACTTTCTCTATGGCAAGGAACGCAAGCTCGAAGAGCTGCGCCTCG AAAAAGCGCGGGAGCTGCGCGAGGTCGTGGCCGCAGGTGTCATCGATGAT GCGCTGGCCTTCTGCGTCGAGAACAAGCTCAACATGATCGTTTCGGGCGG CACCTCCACCGGCAAGACCGTGGCCGCGCGCAAGATCCTGTCTCACGTCC CATCAGAGGAACGCATCGTCACCATCGAGGAAGCCGCCGAGCTTCTGCCT ACACAGCCCAATGCCGTGACCCTTATCGCCAACCGGGATGCGGAATTCCA GACCGCCGATGTGCTGCTCACAGCAACCCTGCGGATGCGCCCCGACCGGA TCATCCTTGGCGAGGTACGCGGCAAAGAGGCCATGACCTTTCTCGAGGCG ATCAACACCGGCCATGGCGGTTCCATGACCACGCTTCATGCCGAAACCCC GCAGCTCGCCGTGCAACGCCTCGCGATCGCAGCCCTCAAGACCGAGATCC CGATGACCTATGCGGACATGATCCAGTACATCGAGAACTCCATCGACGTG ATCATCCAGGCCGGTCGTCATGACGGCCGGCGCGGTATCACCGAATTCTA CCTCCCCGGCACAAGCGAAATCGGAGCATCCCAATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig62:2622..3608-

>mRNA_P-littoralis_Contig62.3.1 ID=mRNA_P-littoralis_Contig62.3.1|Name=mRNA_P-littoralis_Contig62.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig62:2622..3608- (Pylaiella littoralis U1_48)
ATGTCGCTGAGCTATCTCGAAACCTCGCTCGACCGGATCGACGCCGCTGC
CCGCGACGATGTCATCGAGATCTGTATCAACCCCGACGGCACCTGCTGGG
GCGAGTTCCAAGGCGATCATTTCATGCGCGCACTGGATCAGAGGCTGACC
GCGACAGACGTGAAGGACCTCGGCAACCAGATCGCCTCTTCAGCCAATAC
CACCATGAGCAAGGACCGCCCTATCGTCTCGGTCTCGATCACCTACAAGG
GCCGCCCGATCCGCGCCCAGGTCATCACGCCGCCCGCGGTGCTCTCCGCG
ATGTCGATCAGCTTGCGGTTCTTCTCGAACCTGCCGCTCGAGGGGATCAA
ACTCGACTTTCTCTATGGCAAGGAACGCAAGCTCGAAGAGCTGCGCCTCG
AAAAAGCGCGGGAGCTGCGCGAGGTCGTGGCCGCAGGTGTCATCGATGAT
GCGCTGGCCTTCTGCGTCGAGAACAAGCTCAACATGATCGTTTCGGGCGG
CACCTCCACCGGCAAGACCGTGGCCGCGCGCAAGATCCTGTCTCACGTCC
CATCAGAGGAACGCATCGTCACCATCGAGGAAGCCGCCGAGCTTCTGCCT
ACACAGCCCAATGCCGTGACCCTTATCGCCAACCGGGATGCGGAATTCCA
GACCGCCGATGTGCTGCTCACAGCAACCCTGCGGATGCGCCCCGACCGGA
TCATCCTTGGCGAGGTACGCGGCAAAGAGGCCATGACCTTTCTCGAGGCG
ATCAACACCGGCCATGGCGGTTCCATGACCACGCTTCATGCCGAAACCCC
GCAGCTCGCCGTGCAACGCCTCGCGATCGCAGCCCTCAAGACCGAGATCC
CGATGACCTATGCGGACATGATCCAGTACATCGAGAACTCCATCGACGTG
ATCATCCAGGCCGGTCGTCATGACGGCCGGCGCGGTATCACCGAATTCTA
CCTCCCCGGCACAAGCGAAATCGGAGCATCCCAATGA
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