mRNA_P-littoralis_Contig62.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig62.2.1
Unique NamemRNA_P-littoralis_Contig62.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A327LPX0_9RHOB (Uncharacterized protein n=131 Tax=root TaxID=1 RepID=A0A327LPX0_9RHOB)

HSP 1 Score: 581 bits (1498), Expect = 7.620e-208
Identity = 316/331 (95.47%), Postives = 323/331 (97.58%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGMGQTG 993
            MSVVTYFVETSQ YLDTAAETQFG+VAATVGTLLVLGTTLVVILV +NMIYQY+AMDG TAFWLAVKIGLIGIFATNW+QFNA SSAIL GIDSIAGALVASVGGGSPGPSGTFAEEFDRLI+ELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFA+YPIVVAGVFATITGV+SALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASG EYAALRARQFFGVQQMP RQGMGQ G
Sbjct:    1 MSVVTYFVETSQSYLDTAAETQFGAVAATVGTLLVLGTTLVVILVGINMIYQYRAMDGHTAFWLAVKIGLIGIFATNWMQFNAFSSAILYGIDSIAGALVASVGGGSPGPSGTFAEEFDRLIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFAIYPIVVAGVFATITGVASALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGTEYAALRARQFFGVQQMPARQGMGQKG 331          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: Q1GN25_RUEST (Uncharacterized protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=Q1GN25_RUEST)

HSP 1 Score: 573 bits (1477), Expect = 1.250e-204
Identity = 311/324 (95.99%), Postives = 318/324 (98.15%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVR 972
            MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVF+NMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGG+PGPSGTF+EEFDRLI+ELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMI LLIGIAPVMIFLTLFEVTKDYFARWLSAL+SFALYPIVVAGVFATITGVSSALIGELGDPEGA NIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGL GGYSFARAAMGSQQAYNRYL GGASGAEYAALRARQFFG+Q +P R
Sbjct:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFVNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGTPGPSGTFSEEFDRLIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMITLLIGIAPVMIFLTLFEVTKDYFARWLSALVSFALYPIVVAGVFATITGVSSALIGELGDPEGAPNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLSGGYSFARAAMGSQQAYNRYLTGGASGAEYAALRARQFFGMQALPSR 324          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A221K8S4_9RHOB (Type IV secretion system protein VirB6 n=18 Tax=root TaxID=1 RepID=A0A221K8S4_9RHOB)

HSP 1 Score: 569 bits (1467), Expect = 4.010e-203
Identity = 307/327 (93.88%), Postives = 319/327 (97.55%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGM 981
            MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTT+VVI VFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGG PGPSGTFAEEFDRLI+ELG+YLNAAGSELNWMAGAMLDIVGVL+LSILGGLAAFILVASRLMIALLIGIAPVM+FLTLF+VTKDYFARWLSALISFA+YPIVVAGVFATITGV+SALIGELGDPEGA+NIGALIPFFMMVLMAKGFI+ATPFIVRAISGNIMMPALSGGL G Y FARAAMG+QQAYNRYL+GGASGAEYAALRARQ FGVQQMP R GM
Sbjct:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTVVVIFVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGVPGPSGTFAEEFDRLIAELGEYLNAAGSELNWMAGAMLDIVGVLMLSILGGLAAFILVASRLMIALLIGIAPVMMFLTLFDVTKDYFARWLSALISFAIYPIVVAGVFATITGVASALIGELGDPEGATNIGALIPFFMMVLMAKGFIVATPFIVRAISGNIMMPALSGGLSGSYGFARAAMGNQQAYNRYLVGGASGAEYAALRARQMFGVQQMPQRPGM 327          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A086XUS6_9RHOB (Conjugal transfer protein TrbL n=8 Tax=Rhodobacterales TaxID=204455 RepID=A0A086XUS6_9RHOB)

HSP 1 Score: 567 bits (1462), Expect = 2.320e-202
Identity = 306/335 (91.34%), Postives = 322/335 (96.12%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGMGQTGQASG 1005
            MS+VTYFVETSQ YLD+AAETQFGSVAATVGTLLV  +TLVV+LVF+NMI+QY+AMDGRTAFWLAVK+GLIGIFATNWVQFNA SSAIL+GIDSIAGALVASVGGGSPGPSGTFAEEFDRLI+ELG+YLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFA+YPIV+AGVFATITGVSSALI ELGDPEGASNIGAL+PFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGG YSF RAAMGSQQAYNRY +GGASGAEYAALRARQFFGVQQMP+RQG  QTG   G
Sbjct:    1 MSIVTYFVETSQTYLDSAAETQFGSVAATVGTLLVAASTLVVLLVFINMIFQYRAMDGRTAFWLAVKVGLIGIFATNWVQFNAFSSAILSGIDSIAGALVASVGGGSPGPSGTFAEEFDRLIAELGNYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFAIYPIVIAGVFATITGVSSALIAELGDPEGASNIGALLPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGTYSFTRAAMGSQQAYNRYQVGGASGAEYAALRARQFFGVQQMPLRQGPRQTGSTGG 335          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A176FJS6_9RHOB (Conjugal transfer protein TrbL n=10 Tax=Rhodobacterales TaxID=204455 RepID=A0A176FJS6_9RHOB)

HSP 1 Score: 552 bits (1423), Expect = 2.090e-196
Identity = 296/329 (89.97%), Postives = 315/329 (95.74%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGMGQ 987
            MSVVTYFVETSQGYLD+AAETQFG+VAATVGT+LVLGTTLVVILV +NMIYQY+AMDGRTAFWLAVK+GLIG+FATNWVQFNA SSA+L GIDSIAG+LVASVGGG+PGPSGTFAEEFDRLI+ELG+YLNAAGSELNW+AGA+LD++GVLLLSILGGLAAFILV SRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSAL+SFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALS G+GG Y F RA  GSQQAYNRYLIGGASGAEYAALRARQFFGVQ MP R G+ Q
Sbjct:    1 MSVVTYFVETSQGYLDSAAETQFGAVAATVGTMLVLGTTLVVILVCVNMIYQYRAMDGRTAFWLAVKVGLIGVFATNWVQFNAFSSAVLNGIDSIAGSLVASVGGGTPGPSGTFAEEFDRLIAELGEYLNAAGSELNWVAGALLDVLGVLLLSILGGLAAFILVTSRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALVSFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSAGMGGAYGFGRALGGSQQAYNRYLIGGASGAEYAALRARQFFGVQTMPQRPGVNQ 329          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A7S9QEI1_9RHOB (Type IV secretion system protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A7S9QEI1_9RHOB)

HSP 1 Score: 546 bits (1407), Expect = 5.700e-194
Identity = 294/327 (89.91%), Postives = 312/327 (95.41%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGM 981
            MSVVTYFVETSQ YLD+AAETQFG+VAATVGT+L LG TLV  LV +NMIYQY+AMDGRTAFWLAVK+GLIGIFATNWVQFNALSSAIL GIDSIAG+LVASVGGG+PGPSGTFAEEFDRLI+ELGDYLNAAGSEL WMAGA+LD++GVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSAL+SFA+YPIVVAGVFATIT VS+ALIGELGDP GASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGG YSF RA  GSQQAYNRYLIGGA+GAEYAALRARQFFGVQQMP R+G+
Sbjct:    1 MSVVTYFVETSQSYLDSAAETQFGAVAATVGTILALGATLVFALVCINMIYQYRAMDGRTAFWLAVKVGLIGIFATNWVQFNALSSAILNGIDSIAGSLVASVGGGTPGPSGTFAEEFDRLIAELGDYLNAAGSELQWMAGALLDVLGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALVSFAIYPIVVAGVFATITDVSTALIGELGDPVGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGAYSFGRALGGSQQAYNRYLIGGATGAEYAALRARQFFGVQQMPQRRGL 327          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A166TSA8_9RHOB (Conjugal transfer protein TrbL n=1 Tax=Sulfitobacter sp. HI0023 TaxID=1822225 RepID=A0A166TSA8_9RHOB)

HSP 1 Score: 533 bits (1372), Expect = 1.310e-188
Identity = 282/336 (83.93%), Postives = 311/336 (92.56%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGMGQTGQASGT 1008
            MSVVTYFVET+QGYLDTAAETQFG+VAATVGT+LVLG TLV +LV +NMIYQY+AMDGRTAFWLA+K  LIG+FATNWVQFNA+SSAIL GIDSIAG+LVASVGGG+PGPSGTFAEEFDRLI+ELG+YLNAAGSELNWMAGA++D++GVLLLSILGGLAAF+LVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFA+YP+VVAGVFATITGV++AL+GELGDP+GASNIGALIPFFMM+LMAKGF+ ATPFIVRAISGNIMMPALS GLGG Y F RA +GS QAYNRYL GGASGAEYAALR RQ  G+Q +P R GM     ASGT
Sbjct:    1 MSVVTYFVETAQGYLDTAAETQFGAVAATVGTVLVLGATLVFMLVCINMIYQYRAMDGRTAFWLAIKTALIGVFATNWVQFNAVSSAILHGIDSIAGSLVASVGGGTPGPSGTFAEEFDRLIAELGEYLNAAGSELNWMAGALMDVLGVLLLSILGGLAAFVLVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFAIYPVVVAGVFATITGVATALMGELGDPDGASNIGALIPFFMMILMAKGFLFATPFIVRAISGNIMMPALSAGLGGAYGFGRALLGSPQAYNRYLTGGASGAEYAALRTRQLMGMQPLPHRSGMAMDPSASGT 336          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A3A8AQN8_9RHOB (Type IV secretion system protein n=1 Tax=Roseovarius spongiae TaxID=2320272 RepID=A0A3A8AQN8_9RHOB)

HSP 1 Score: 531 bits (1367), Expect = 7.000e-188
Identity = 281/324 (86.73%), Postives = 306/324 (94.44%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVR 972
            MSVVTYFVET++GYLDTAAETQFG+VAATVGTLLVLGTTLVV LVF+NMIYQY+AMDGRTAFWLAVK+GLIGIFATNWVQFNALS+AIL+GIDSIAG+LVASVGGG+PGPSGTFAEEFD+LI+ LGDYLNAAGSELNWMAGA+LD +GVL+LSILGGLAAFI+VASRLMIALLIG+APVMIFLTLFEVTKDYFARWLSALISFA+YPIVVAGVFATITGVS AL+ EL DPEGASNIGALIPFFMMVLMAKGF+ ATPFIVRA+SGNIMMPALS G GG Y+FAR   GS+Q YNRY IGGA+GAEYAALRARQ FGVQ +P R
Sbjct:    1 MSVVTYFVETAEGYLDTAAETQFGAVAATVGTLLVLGTTLVVALVFINMIYQYRAMDGRTAFWLAVKVGLIGIFATNWVQFNALSAAILSGIDSIAGSLVASVGGGTPGPSGTFAEEFDQLIASLGDYLNAAGSELNWMAGALLDTLGVLMLSILGGLAAFIVVASRLMIALLIGMAPVMIFLTLFEVTKDYFARWLSALISFAMYPIVVAGVFATITGVSRALLAELEDPEGASNIGALIPFFMMVLMAKGFLFATPFIVRAVSGNIMMPALSAGFGGSYAFARGLAGSRQVYNRYAIGGATGAEYAALRARQLFGVQSLPTR 324          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A5P3A4K2_9RHOB (TrbL/VirB6 plasmid conjugal transfer protein n=6 Tax=Rhodobacterales TaxID=204455 RepID=A0A5P3A4K2_9RHOB)

HSP 1 Score: 530 bits (1364), Expect = 2.000e-187
Identity = 280/324 (86.42%), Postives = 305/324 (94.14%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVR 972
            MSVV YFVET+QGYLD+AAETQFG+VAATVGT+LVLGTTLVVILV +NMIYQY+AMDGRTAFWLA K+GLIG+FAT+WVQFNAL+SA+L GIDSIAG+LVASVGGGSPGPSGTFAEEFD+LI+ LGDYLNAAGSELNWMAGA++D +GVLLLSILGGLAAFI+VASRLMI LLIGIAPVMIFLTLFEVTKDYFARWLSALISFA+YPIV+AGVFATITGVS AL+ ELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRA+SGNIMMPALS G GG Y+FAR   GSQQ YNRY IGGA+GAEYAALRARQFFGVQ +P R
Sbjct:    1 MSVVAYFVETAQGYLDSAAETQFGAVAATVGTILVLGTTLVVILVCVNMIYQYRAMDGRTAFWLAAKVGLIGVFATDWVQFNALASAMLNGIDSIAGSLVASVGGGSPGPSGTFAEEFDQLIAALGDYLNAAGSELNWMAGALMDTLGVLLLSILGGLAAFIIVASRLMITLLIGIAPVMIFLTLFEVTKDYFARWLSALISFAMYPIVIAGVFATITGVSRALLAELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAVSGNIMMPALSAGFGGSYAFARGLAGSQQVYNRYAIGGATGAEYAALRARQFFGVQSLPTR 324          
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Match: A0A0T5NP13_9RHOB (Conjugal transfer protein TrbL n=74 Tax=root TaxID=1 RepID=A0A0T5NP13_9RHOB)

HSP 1 Score: 525 bits (1353), Expect = 9.470e-186
Identity = 282/324 (87.04%), Postives = 303/324 (93.52%), Query Frame = 1
Query:    1 MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVR 972
            MSVVTYFVET++GYL+TAAETQFG+VAATVGT+LVLGTTLVVILVF+N IYQY+AMDG TAFWLAVK+ LIG FATNWVQFN L++AIL GIDSIAG+LVASVGGGSPGPSGTFAEEFD LI+ LGDYLNAAGSELNWMAGA+LD +GVLLLSILGGLAAFI+VASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFA+YPIVVAGVFATITGVS AL+ ELGDPEGASNIGALIPFFMMVLMAKGFIIATPF+VRAISGNIMMPALS G GG Y+FAR   GSQQ YNRY IGGA+GAEYAALRARQFFGVQ +P R
Sbjct:    1 MSVVTYFVETAEGYLNTAAETQFGAVAATVGTMLVLGTTLVVILVFINTIYQYRAMDGCTAFWLAVKVALIGAFATNWVQFNILAAAILNGIDSIAGSLVASVGGGSPGPSGTFAEEFDDLIAALGDYLNAAGSELNWMAGALLDTLGVLLLSILGGLAAFIVVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFAMYPIVVAGVFATITGVSRALLAELGDPEGASNIGALIPFFMMVLMAKGFIIATPFLVRAISGNIMMPALSAGFGGSYAFARGLAGSQQVYNRYAIGGATGAEYAALRARQFFGVQALPSR 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A327LPX0_9RHOB7.620e-20895.47Uncharacterized protein n=131 Tax=root TaxID=1 Rep... [more]
Q1GN25_RUEST1.250e-20495.99Uncharacterized protein n=2 Tax=Roseobacteraceae T... [more]
A0A221K8S4_9RHOB4.010e-20393.88Type IV secretion system protein VirB6 n=18 Tax=ro... [more]
A0A086XUS6_9RHOB2.320e-20291.34Conjugal transfer protein TrbL n=8 Tax=Rhodobacter... [more]
A0A176FJS6_9RHOB2.090e-19689.97Conjugal transfer protein TrbL n=10 Tax=Rhodobacte... [more]
A0A7S9QEI1_9RHOB5.700e-19489.91Type IV secretion system protein n=2 Tax=Rhodobact... [more]
A0A166TSA8_9RHOB1.310e-18883.93Conjugal transfer protein TrbL n=1 Tax=Sulfitobact... [more]
A0A3A8AQN8_9RHOB7.000e-18886.73Type IV secretion system protein n=1 Tax=Roseovari... [more]
A0A5P3A4K2_9RHOB2.000e-18786.42TrbL/VirB6 plasmid conjugal transfer protein n=6 T... [more]
A0A0T5NP13_9RHOB9.470e-18687.04Conjugal transfer protein TrbL n=74 Tax=root TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:1001..2008 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog252305.OB2597_16802
PFAMsTrbL
Model size1008
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03201
KEGG TC3.A.7
KEGG Pathwayko03070,map03070
KEGG ModuleM00333
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.69e-217
EggNOG OGsCOG3704@1|root,COG3704@2|Bacteria,1QJY1@1224|Proteobacteria,2TSZ1@28211|Alphaproteobacteria,2PE33@252301|Oceanicola
DescriptionConjugal transfer protein TrbL
Cds size1008
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791289.3948839-CDS-P-littoralis_Contig62:1000..20081680791289.3948839-CDS-P-littoralis_Contig62:1000..2008Pylaiella littoralis U1_48CDSP-littoralis_Contig62 1001..2008 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.2.1prot_P-littoralis_Contig62.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig62 1001..2008 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig62.2.1

>prot_P-littoralis_Contig62.2.1 ID=prot_P-littoralis_Contig62.2.1|Name=mRNA_P-littoralis_Contig62.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=336bp
MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFLNMI
YQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALV
ASVGGGSPGPSGTFAEEFDRLISELGDYLNAAGSELNWMAGAMLDIVGVL
LLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSAL
ISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMA
KGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGSQQAYNRYLIG
GASGAEYAALRARQFFGVQQMPVRQGMGQTGQASGT
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mRNA from alignment at P-littoralis_Contig62:1001..2008-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig62.2.1 ID=mRNA_P-littoralis_Contig62.2.1|Name=mRNA_P-littoralis_Contig62.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig62:1001..2008- (Pylaiella littoralis U1_48)
ATGAGCGTCGTTACCTATTTCGTTGAAACCTCACAGGGCTATCTCGACAC CGCCGCCGAAACCCAGTTCGGATCTGTCGCGGCGACGGTTGGCACCTTGC TGGTGTTGGGCACAACGCTGGTGGTGATCCTCGTCTTCCTGAACATGATC TACCAGTACAAGGCGATGGACGGTCGTACGGCCTTTTGGCTCGCAGTCAA GATCGGGCTCATCGGGATATTTGCGACAAACTGGGTGCAGTTCAACGCGC TCTCCTCCGCCATCCTCGCCGGGATCGACAGCATCGCCGGCGCACTTGTC GCTTCGGTCGGGGGCGGCAGCCCCGGACCCTCCGGCACGTTCGCGGAAGA GTTCGATCGGCTGATCTCGGAACTCGGCGATTACCTGAACGCCGCCGGGT CCGAGCTGAACTGGATGGCCGGTGCCATGCTCGACATCGTCGGTGTTCTT CTACTCTCGATCCTGGGCGGTCTGGCCGCCTTCATCTTGGTAGCCTCTCG GCTGATGATCGCGCTCCTGATCGGGATCGCCCCGGTGATGATTTTCCTGA CCCTCTTCGAAGTGACCAAGGATTATTTCGCGCGCTGGCTGTCGGCGCTG ATTTCCTTTGCGCTCTACCCCATCGTTGTCGCAGGCGTGTTCGCAACGAT CACAGGCGTTTCCTCCGCGCTCATCGGCGAACTAGGCGACCCCGAAGGCG CCTCAAACATCGGCGCACTCATCCCCTTCTTTATGATGGTGCTCATGGCC AAGGGCTTCATTATCGCCACGCCTTTCATCGTCCGCGCGATCTCCGGAAA CATCATGATGCCCGCCCTCTCGGGTGGCCTCGGCGGCGGCTACAGCTTCG CCCGCGCCGCCATGGGCAGTCAGCAGGCTTACAACCGTTACCTGATCGGC GGGGCAAGTGGCGCGGAATACGCAGCCCTCAGGGCGCGGCAGTTCTTCGG GGTACAGCAGATGCCAGTGCGGCAAGGCATGGGACAGACGGGTCAGGCAA GCGGCACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig62:1001..2008-

>mRNA_P-littoralis_Contig62.2.1 ID=mRNA_P-littoralis_Contig62.2.1|Name=mRNA_P-littoralis_Contig62.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig62:1001..2008- (Pylaiella littoralis U1_48)
ATGAGCGTCGTTACCTATTTCGTTGAAACCTCACAGGGCTATCTCGACAC
CGCCGCCGAAACCCAGTTCGGATCTGTCGCGGCGACGGTTGGCACCTTGC
TGGTGTTGGGCACAACGCTGGTGGTGATCCTCGTCTTCCTGAACATGATC
TACCAGTACAAGGCGATGGACGGTCGTACGGCCTTTTGGCTCGCAGTCAA
GATCGGGCTCATCGGGATATTTGCGACAAACTGGGTGCAGTTCAACGCGC
TCTCCTCCGCCATCCTCGCCGGGATCGACAGCATCGCCGGCGCACTTGTC
GCTTCGGTCGGGGGCGGCAGCCCCGGACCCTCCGGCACGTTCGCGGAAGA
GTTCGATCGGCTGATCTCGGAACTCGGCGATTACCTGAACGCCGCCGGGT
CCGAGCTGAACTGGATGGCCGGTGCCATGCTCGACATCGTCGGTGTTCTT
CTACTCTCGATCCTGGGCGGTCTGGCCGCCTTCATCTTGGTAGCCTCTCG
GCTGATGATCGCGCTCCTGATCGGGATCGCCCCGGTGATGATTTTCCTGA
CCCTCTTCGAAGTGACCAAGGATTATTTCGCGCGCTGGCTGTCGGCGCTG
ATTTCCTTTGCGCTCTACCCCATCGTTGTCGCAGGCGTGTTCGCAACGAT
CACAGGCGTTTCCTCCGCGCTCATCGGCGAACTAGGCGACCCCGAAGGCG
CCTCAAACATCGGCGCACTCATCCCCTTCTTTATGATGGTGCTCATGGCC
AAGGGCTTCATTATCGCCACGCCTTTCATCGTCCGCGCGATCTCCGGAAA
CATCATGATGCCCGCCCTCTCGGGTGGCCTCGGCGGCGGCTACAGCTTCG
CCCGCGCCGCCATGGGCAGTCAGCAGGCTTACAACCGTTACCTGATCGGC
GGGGCAAGTGGCGCGGAATACGCAGCCCTCAGGGCGCGGCAGTTCTTCGG
GGTACAGCAGATGCCAGTGCGGCAAGGCATGGGACAGACGGGTCAGGCAA
GCGGCACG
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