prot_P-littoralis_Contig62.106.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig62.106.1
Unique Name	prot_P-littoralis_Contig62.106.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	415

Homology

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BLAST of mRNA_P-littoralis_Contig62.106.1 vs. uniprot
Match: D8LD93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD93_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 8.470e-14
Identity = 61/162 (37.65%), Postives = 85/162 (52.47%), Query Frame = 0

Query:    6 MISRKQRWRRVCRGTRAAATSEXXXXXXXXXXXXXXXXXXXGPPHPT--NSLSIDDSLTQRRGTSVTSEASEDGGDATATVKG-PSTSTKIKNKDASGLTR---RVRFNHRVRVILVPCARELRDLGAQLWWGPDDYLNFRREYILAVR-SEAADADKRPKQ 160
            M++RKQ+WRRV RG R++  +                       HP   NSLSIDDSL +   T   + + E+           PS+S +    D  G  R    VRFNH+VRV+LVP  +ELR L  +LWWG +DY+ FRRE++ A+R + AA+ + R  Q
Sbjct:    1 MLTRKQQWRRV-RGPRSSVETHQLADRGGRKTCPRAARVPDALAHPRAINSLSIDDSLLRLVATGRPAASDEEXXXXXXXXPAVPSSSVRRPVVDEIGAIRVGSNVRFNHQVRVVLVPSRKELRPLIEELWWGTNDYVEFRREFVQAMREAAAAEVENRANQ 161

[Close]

BLAST of mRNA_P-littoralis_Contig62.106.1 vs. uniprot
Match: A0A6H5KW42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW42_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.320e-13
Identity = 58/163 (35.58%), Postives = 82/163 (50.31%), Query Frame = 0

Query:    6 MISRKQRWRRVCRGTRAAATSEXXXXXXXXXXXXXXXXXXXGPPHPT--NSLSIDDSLTQRRGTSVTSEASEDGGDA--------------TATVKGPSTSTKIKNKDASGLTRRVRFNHRVRVILVPCARELRDLGAQLWWGPDDYLNFRREYILAVRSEAA 152
            M++RKQ+WRRV RG R++  +                     P HP   NSLSIDDSL +   T   + +                     +++V+ P    K+   DA  +   VRFNH+VRV+LVP  +ELR L  +LWWG +DY+ FRRE++ A+R  AA
Sbjct:    1 MLTRKQQWRRV-RGPRSSVETHQLADRGGGQTCQRVAGAPGAPAHPRAINSLSIDDSLLRLAATGRPAASDXXXXXXXXXXXXXXXXPAVPSSSVRPP----KVDKSDAFCVGSNVRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMREAAA 158

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig62.106.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig62.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LD93_ECTSI	8.470e-14	37.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KW42_9PHAE	1.320e-13	35.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig62	contig	P-littoralis_Contig62:477159..487737 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig62.106.1	mRNA_P-littoralis_Contig62.106.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig62 476212..487854 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig62.106.1 ID=prot_P-littoralis_Contig62.106.1|Name=mRNA_P-littoralis_Contig62.106.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=415bp
MPGSRMISRKQRWRRVCRGTRAAATSEATTAVAAAAAGGGGSKNNSGPPH
PTNSLSIDDSLTQRRGTSVTSEASEDGGDATATVKGPSTSTKIKNKDASG
LTRRVRFNHRVRVILVPCARELRDLGAQLWWGPDDYLNFRREYILAVRSE
AADADKRPKQQQQQPRPEEPAASATPPAPGESKVIVEPTTISLVAGSNDT
MPPPSALCATSKGAEAATASSPPTAARTTTTTDQAANSDIIIQVSGVSPA
AAADAAAAAVFDNGSSGEQDVDSEEGGDDGGVILSSTSISPEALGSAAAE
AAAASSLSPPPPSPSPSLPWSTLDASKEEAAAFEGKDDHNAEDDNKALLS
MLPPPRRPLLSGRGWPSAAPAAPCTMDGFARAAVDEDGDEDEDDDGYRTH
SMSSLSEDSSEYGA*