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Homology
BLAST of mRNA_P-littoralis_Contig619.14.2 vs. uniprot
Match: D7FJA8_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA8_ECTSI) HSP 1 Score: 198 bits (504), Expect = 2.910e-54 Identity = 153/229 (66.81%), Postives = 171/229 (74.67%), Query Frame = 2
Query: 866 ATTAQNLGIVEELVSVGADLDVGFPDDQNRTALHLAVAHGMTLVAQVLLRAGSNVNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGVLRSPPRSTAAWVAFAALCAAARSGQMKTADVLLRAGVPPVQEGIHRSGPLSCAARAGHLAVARRILKTSGTVDERDSHGCTPLIRASEALQPRLVAFLLASGADYTIRSS 1552
AT Q+LGIV+ LVS GADL VG+ D NR LHLAVA+GMT VAQ LL+AGS VN T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HGVLR+ P T+AWVAF LCAAARSG ADVL+ AGVPP QEG+ R GPLSCAA + L VARRILK SG VDE+DSHGCTPL RAS+ ++PRL AFLLASGA+ ++RS+
Sbjct: 2 ATIRQDLGIVKALVSGGADLSVGYLQDLNRCPLHLAVAYGMTPVAQYLLKAGSKVNLTDDHGCTPLYSASFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKEFIRHGVLRASPPGTSAWVAFTTLCAAARSGHPDVADVLIEAGVPPAQEGLLRMGPLSCAASSKKLEVARRILKASGVVDEKDSHGCTPLNRASQMIRPRLTAFLLASGANPSVRSA 230
BLAST of mRNA_P-littoralis_Contig619.14.2 vs. uniprot
Match: A0A0G4FUP4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FUP4_VITBC) HSP 1 Score: 59.7 bits (143), Expect = 2.690e-5 Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 2
Query: 581 LGKADSVQKLINSGADPDG-RFKGVPHIIAAARAGRTRVVKVLLRAGANIDALDDAKKGTALGYAAYALHNDTVTALTEAGARLKDVEVDKY---------------AIHGATTAQNLGIVEELVSVGADLDVGFPDDQNRTALHLAVAHGMTLVAQVLLRAGSNVN 1033
+G ++ L++ G D DG +G ++ A R G ++V++LLR GAN A+D K G + Y A + + V T R+ V ++ A+H A ++ +V L+SVG D ++ D RTA+HLAV L+ Q +L G N
Sbjct: 232 VGSHAAMTVLVDGGVDVDGVSAQGETPLLVACRVGNAKIVRLLLRNGANPRAVD--KGGRNVVYLAASHPSAKVAGTTLKVLRMSHVNLNGCVCRQPQDASSTPHLSALHVAILNHDVEMVGRLLSVGCDANIQLADGSGRTAVHLAVQTDHQLLVQSVLEFGGQPN 396
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FJA8 |
| PFAMs | Ank_2,Ank_4 |
| Model size | 2730 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Evalue | 4.87e-58 |
| EggNOG OGs | COG0666@1|root,KOG4177@2759|Eukaryota |
| Description | spectrin binding |
| Cds size | 1374 |
| COG category | I |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791287.6809638-UTR-P-littoralis_Contig619:48617..48862 | 1680791287.6809638-UTR-P-littoralis_Contig619:48617..48862 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig619 48618..48862 + |
| 1680791287.6919975-UTR-P-littoralis_Contig619:48879..49175 | 1680791287.6919975-UTR-P-littoralis_Contig619:48879..49175 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig619 48880..49175 + |
| 1680791287.7720542-UTR-P-littoralis_Contig619:59557..60372 | 1680791287.7720542-UTR-P-littoralis_Contig619:59557..60372 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig619 59558..60372 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791287.7141523-CDS-P-littoralis_Contig619:49175..49314 | 1680791287.7141523-CDS-P-littoralis_Contig619:49175..49314 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig619 49176..49314 + |
| 1680791287.725572-CDS-P-littoralis_Contig619:56713..57435 | 1680791287.725572-CDS-P-littoralis_Contig619:56713..57435 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig619 56714..57435 + |
| 1680791287.7345145-CDS-P-littoralis_Contig619:57774..57917 | 1680791287.7345145-CDS-P-littoralis_Contig619:57774..57917 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig619 57775..57917 + |
| 1680791287.7471247-CDS-P-littoralis_Contig619:58272..58575 | 1680791287.7471247-CDS-P-littoralis_Contig619:58272..58575 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig619 58273..58575 + |
| 1680791287.7620418-CDS-P-littoralis_Contig619:59490..59557 | 1680791287.7620418-CDS-P-littoralis_Contig619:59490..59557 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig619 59491..59557 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig619.14.2 >prot_P-littoralis_Contig619.14.2 ID=prot_P-littoralis_Contig619.14.2|Name=mRNA_P-littoralis_Contig619.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=458bp
MSNSERDVNKLVYLGKADSVQKLINSGADPDGRFKGVPHIIAAARAGRTR
VVKVLLRAGANIDALDDAKKGTALGYAAYALHNDTVTALTEAGARLKDVE
VDKYAIHGATTAQNLGIVEELVSVGADLDVGFPDDQNRTALHLAVAHGMT
LVAQVLLRAGSNVNQTDESGCTPLYSAAYVGHLQCAVELLKFGADMLIMN
NDGNSALEASSQEGHAAIVEELLRHGVLRSPPRSTAAWVAFAALCAAARS
GQMKTADVLLRAGVPPVQEGIHRSGPLSCAARAGHLAVARRILKTSGTVD
ERDSHGCTPLIRASEALQPRLVAFLLASGADYTIRSSCGCDKDALMSIGE
SMGLDPAAEERPEAQIISAKLATRRVLLRGVAYRAISWAWPTGSLGLTKH
RGRKDVTASVRGGVVSVVWGREQQRRRQAVLSAMSRHAGKPEPKTKHKRQ
LTMCKLH* back to topmRNA from alignment at P-littoralis_Contig619:48618..60372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig619.14.2 ID=mRNA_P-littoralis_Contig619.14.2|Name=mRNA_P-littoralis_Contig619.14.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11755bp|location=Sequence derived from alignment at P-littoralis_Contig619:48618..60372+ (Pylaiella littoralis U1_48)
CGCTGCCCTTGTGCCCCCCCGTACTCCTCCTCTCGTTTACCCCCGCCATC
CGTTCTCCCTCTTTTAGTCAAGGCCTGCCTCTCAGCCGCGTCCCTCTCTC
TTTTCCGTATATACATCGCGGAAGAAGTACTGTCCCGTTGTGTCCCGTCA
TCCCAGTATACCGTCCCCGACTCCCGGCCCCGGAGTCCAAACAGAATGCT
GGCGATTCGAACTCCCCAAATTTTGAATGTACTACACCCCGACGAAAGGC
TATGGAAAAAGGACATGCCCTTTGCACCCGACACTGCTGCACTGCTGCTC
CACTGCACACGCTCGGCCACGCGATCCCGTCAAGTACAAAGAAAAGGTGC
TGGTGTCGCCTTTCTCACGCTTCCGTATCTCTCCCCTTCCATCTCCCTCA
ATACCGTATCGGAAGTCTAGTCCCTTAAAACTTGCAAACCTGTTGTCTGG
TTGCTGTATCTCCTTCTCCTGCGGATTCCCTCTCAATCGCGTTCGCGTCG
TATTTCTCTCTCTGAGGACTGGCCGACGGACCGACCCTGCCTCCAGCCAC
AAAGGGTAATGAGCAACAGCGAACGTGACGTCAACAAGCTGGTATACCTG
GGCAAGGCAGATAGCGTGCAAAAGCTCATAAATTCTGGAGCTGATCCTGA
TGGCCGCTTCAAGGGTGTGCCTCACATCATCGCTGCGGCTCGCGCAGGTG
GGTGCGTGTTTTATATGTACGGAGTATTGCATACCTAGCGCGATCCATTG
CTGCTGTATCGCAGAAGATACGCCTCCCTGTGGGTCGATGTCAATCTTCG
GTTTCACTCAACAGCAAAAGCAGAGCGTTAGTGTGGAGAAGGGAGATGCC
AAACAAGGTATTTCGCCAAAAGCTTTCCGAACTCGTTTCGTTTGGTGCCG
GCACCATCTTTGTTGTGGAGTAACTGAGAAATGGAAATCGGTCATAAGGC
CCCCGTGGTATCTCACGCAACCTGAATGACTCATCATAGCCTTGGAGGGC
AACCCAGCATCGGGCACCGCACACAGGTATGAATAAGAATTGTCCCAATT
CCGCAAGGCTGGGGCTGACGAAGTCGGGCACAGTGTACACGATGCGGGCC
AGAGGCTCAACTACTGCTGGTACATAGCACCTGCCAACCCGGAAGAAGTG
AGCAATGAAGATGAACACTGGTCATGTTATGAGAGGAACTAACTTTCGAT
TGAAACCTCGCGGATTTGTGCACACGGATGTTCGCTCTTGCTGAACACGC
ATCGATCGTGTTCGACACACGAGGTGCCCCCGGCAATTACAATGAAATAC
ACTGCAAGGCTCCCACCTGTCGATTGAAAACTCACGGGCTTTTGCTCACG
GATGTTTGCTCTTACTGACTTGAATCGATCATTTTGGTCACACAAGAAGC
CCTCGACAATTGAAACTAGCTGCGGAGAAGCTTGGAGGTAGGAGGCTGGC
AGCCTCGGTGGTTTCTTGGTGATCCGTTGACTACGAGGGAAGGACGGTGT
GATAGTGTGATTTGCGGCCATTCTTGTTGTTATGGAGGGGGCACAAACAA
GGGGTGGCTATATTCCCGATCGGGAAAAAAATGGATAAAAAACTGCTGAA
GCCTTTGAGCTGAAACAGCGACCTCGCACCTTCCCAATGCACAACCAACC
AAGCTTTTCACTTCTCTGACGGTTAGGGTTTTCTCAGGTTGGTTCGTGTT
GGGTCGGTGGTGGATGTTTAGCCAAAAAGACATACCGCGCAGTGTTCAGA
GTAGGGGTTTCGATCAGCGCGCTTACCTCCACAGATGACAAAAGAATTAA
CACGCAGCTTTGCAGGTGCATCCCTCACTTGAACCCTTACTGGAACCTAT
ACGCGCGCTGAAATGTGGCACCGGTATCGAAGTACGTGCGACAAATATTC
GTACCCACAATATCCTGCCTTCCGGTCCCGGGAGTGTTGGTTTTGATTTT
ACACCCCCCCCCAACAAAACGATCCCGTCGAGCACACCAGGAGACAGCAC
CGCGCAGAACACGCCCTCTGGGACAATAATAGCGATCACACCTGTTTGAG
CGTGCGCCTAAGTGTTCTAAGATTAGCCACAGCAAGTTTTGTGGGTGTGG
TCTTTGGCTGAAACGAGGTTGTGCCGGCGGTGTGTGTTGAGGTACCAAAG
TCCGATGAACCTAAAATAGGTCGTTGGAGCCTGTATTTTTTGCCACACAA
TCAGAGGCTCGAATAACCTACTTTATTTTTCACTGATTTTTTGTACCCTA
CCCACAATGCCGCTAGAACCTTGCCACAGCCAAAGCCCACACCCACCAAA
CTTACTTTGGCCAACCTCAGGACACTTTAGCACACGCTAAATAGGTTTGG
TCGCTGTTGGTGTCCCAGGGGCGGAGGTCTGGTTGGTGCTGTTTCCTGTT
GTGCTCAAAAAGTAGCCTCTTTAGCGGTCTGGGCTCTCGGGATTTCGAGA
GGGGGGGTGCCAAGTGGAAATAATCACCTTGGAGATGTCAAGCAGTAAAA
AACGGTCCTACATTGTTTCCTGCTGGTCGACCAGGTATACAACATCTCTT
CGAGTTTTCTTATTTTTCGTCTTCGTGTGAAATCGAAAGGTTCACTGGGA
AGCTTATTGCGCAAGGCAAAGTTGTGAAGGGAAAAGGTGCATAAATGTGC
ATTTATTTGATGCTCGCATTATTTCAGGCGTGTTGTGTAACAAGTGAGAT
ATTTCGATGATACGGCGGCTTCCTTATTCCTTGAATCACCTCCTAGCCTG
GGACATGAGACAGGCGCGTTCATCGCAAGGCTATATGCTATGTGTTGAAA
ACCGTAATTGCAATAGATCTTTTCTGGCATTGGTCCGGGATCTCGCATCT
AATCTGATCAGAAAAAGCCTTTTTTATGTTAACGACTCTTCGAACATTTT
TTCCGACAGCCCCAAACGATCAGAACATCTCTTTTTCTGATACATGGCTG
CACCTTTCAGAAACCTGTTTCGTGTTTTGCACCCCGCGTCAGCAGCCTTT
CACGATGAGATGACCTATAACAACGTTTTCGGCAGCCCTTTGATACCGCG
CAGCCTCAGATGACCACCACAGCAGTAAAAGTGAGACATACACAGCTCGC
GGGCGATGGCTTCGGTATTGCTGTGGCTTCTTTCGTTCGAGAGTGGGCGA
CAAAAAACCAAAACAGATCGGAGGCGTGGATAGGCTCGCACAGAAGGTTT
GCAGGAATCGATGACTTGTGGCAAACAACAAATATGGTGGAGTGTAACAT
GGAGGAATGGTTGTGTAACATCAGAGTTGACTTATGATAATTGGAAAATA
TCACAGTTGTTGGTGGCTCGCTTGGGCTCGTAAGAGCTTACCGGAAAATT
AGGATTGATGGATTGATTCGTCACAGTTTGTGGCTCGCTTGGGCTCAATA
AGGCTTCTCGGAAACTCAGGAGAGCTTGGTTGATTTATCACGGCAGGAGG
TCGGTAGCTCACTTTGGGCTCGTTTGAGCTTGTAATGATGAATTTGCTAC
GGTCATTGATAAATTTTACTCCGGAGTAGTACACAGCAGTGTTGTGTGCT
GGTGGCTCGCTCGGTCCGGAAGGAGACTATCGGGAATTCAGGTGAGATGG
TCTTCTTTAATTACAGTATGGGTGGATATCTCGCGTTGGCTTGTGAGAAC
GTTTCGGAGATCAAGGCGAAACGGTTTGCTTGGAGGGGTGCCAAGAAGAC
GTGTTTATAACGTGTTTTGAGGGCTTCCGAGTACTTCTCGGAAAAGGTGA
TCGTGTCGAGAAACACGTCGAAGGGTTAAAACACCGCTGTCCCTGATGAG
CTGGGAGCAGAGGAGACATCGTTTGCAGAAGCAGCAGCAGGAGCAGCGCA
ACAGGGCGGTAATCTGCAGCCGGGAGTGCTTTGCGGTGCAGTTTGTCGTC
AGAGTAGTTGCAGCAGGAAGCAACAGTAGTAGTTGCAGGAACAGGACGGG
AGGGTCATGGGTGCACTGCCTCAGGAGCTCGAGAGTACTGTGTGCTATTG
TTTGCCTTTGAACTAGAGTATCACCAGCAGGCCACAAAACACAGCAGTAC
CCCGAAGAAGATTATCCCTTACCCGAGAGGCAGCAGCAGAGCGGCTACGA
AAGGCAGAGAGGCTCAGGAAGACATCCCGACGCGGCACACATTAGCAGGC
GCAGTGGAACGAACGGTGTAGCCGGTGGTGATCGGGATATCCAGGACAGT
CCGAGCCCATTGACATATTTGAAGATCAAAGGGGTTTCCACACGGGCGCC
TGCCAAATGACCGGGATTTCGCTGTTCCTGTCCCATGTGACGTTTGTGGT
GTCACACGTTGGTGGCAAGACCCCCCCCCCCCCCTAGCAGCTGAAGTCGA
TATTTGGGAATTGAGGATGTGAATGATTCACGAAACCCCCTTTTTTCGGG
GGGGGGGGGAAATTGGGGAGATTTCAGATTAAGTGTTACAGAACGCGCCC
GACATCCGACATCCACCCACACGCACGCACCAATCCATCCTCGTACTCAT
CCAACCCAACCACGTGTTATCCACACTCCCACCCAACGAACTTACTACCG
AACGGAAGTGCTTCGCACCCAACGCTACCCTACCAAACTCAACCACACAT
CACGGCACCCATCCCGATCTCCCCAGAGAGGGGGACGCAACCCACGACCA
AAGTAACCCGACCCAACCCAACCCGACCCAACTCGACCCACCCAACGCAA
CAAAACCCCAACCCAACCCGACTAACCCATCCTTGTGGTTTCCCTCCAGA
CGCCCCAGATGGGGGGGCGCAACCCAACTCCAACCCAACCTAAGTCAATC
CAACCAAACCTCACACCCAACTCAACTCGACCAACCCGACCGAACCCAAG
CTTACGACAAACCCAACGCAACCCAACATAATCTTACGGTGCCCCCCCCC
CAACCATCCCCAGAGGGGGAGGCGCAAACCAACTCAACCAAACCAACCCG
ACACAACCCAACCTTACGGTGCCCCCACGCCCAACATTAGTCAATCAACC
CAACCGACCCTATTCAACCCAACCAAACCCAACCCACAACGCAATCCAAC
CGACCCCAGCGCAACTCCCAACCCAACCGAACCCCGGTGGCGGACTGCTC
TGTGACAAATGTATTTCTTTCGATCACCACCTGCTGAAGCTGTATCGATT
TTTATTCTTTCTTGTCCTTACACTTCATGAATGCCCGCAAACGTTTTGTG
CTAGCCCATCGATGCCTCGCGGCTTCAGATGGCCACCGCAGGTGAGAAGA
ATTGTGTACGCAGCTCGCGAGGCATTGCTTAAGCGTTGCTGTGGCTTCAT
TCGTTCAAGAGTGTGGAACGAAAAAGCGAACCGTGAAATGAATGTCAAGC
ATCAACGGGCCTCCAGAAACGGAGAGATTTCATGGCCGAAGCTTCTTTCC
AATCACCTACTGGTCTGCGTTGATCATGTGATACAAGATCGTGTGCTTGC
TTCTAAAACCCCTCTTGGAAATGTTGTCATTTGAAAGGCTTTTTTCGGTA
TTTTCGACACATGATGGGTAACCTTAACCTAACCGTTCTGTGAATCCTGG
AGGAAGTTTGTATGATTTGTTACTTCGAAGTATTTTTCTTCGACCGGTTC
ATACGGGCCGGGTGAAATAAGCCTCATCCTGAATCCGCCACGGAAAGCAT
GTATTTTTCACGAGGACTGGTGTGCCAGACTTTTTCACTAGACCGACGTG
TGTATGCGCCGGGCCAGTAAGTGGTTCGCATACAGCAGGAGTATGATAGG
GTTATGTATTCGGGGCGTGTCTGATTGTGCAGGTTGCTAGGCTGGTTCTT
AACAGCAAAATCAAAACCGAACATCGAAACCAAAGTTGATGAATGCAAAA
GATCCATCCCAACTCTGGTTTCGATTGCCAGATGTCTTGGCCAAAAGAGC
CGATATCGAAATCAAAATTTAATAACGGGAAGGCGAACAGGCTTTGGTTC
CTACAAATAAAAGCTGTGGACGTGGCGACAGCAACAACTGCAGCAACCCC
ATCGCACATGCACCCGGCAGCATGTGTGTGTGTGGTGAAGAGCAGCGGCT
TGCCCGGAAGACCAACCGGCAGAGCCAACCCTCCTTCTTGTGTTGTGTGT
AATCGTAACATCATTTGTCTCGCACACCTCAGCACCATCACTTGTACTGT
TATTACTGCTGCTGCTGCTGCGGTGCGCAAAAAAAACATGTGTTGTGCAT
GGATCAATCTATCTGCTGTCGGCTCTTACTTCGAAGTATGTTTTTAAACT
CCCTACAAAATGTCAACCTCTGTTGTTGGTGGTATGTAGTGGTCTGGTGT
CTCGTTGTTGTACGTTGACATCACTTCAGCAGCAGCGAGGAGAGCTCTGT
GCATGCTCGTGGTGGCTTCTACTCCTGCTCCTTGCTGCTGCTTCAGCATA
TGAGAAGATGTGTGTCGTGTGGTGAGTGTTGCTCCACCCAATACAACCGA
GTAGACCAGGGACGCACAATATCGCCATAAAATGTGTTACCTTTCGCGAA
CTTTGGTTTCAATGAAATCCGAAATCATTTTTTTCAAAACCAGAGATGGG
AATCGGAACACATATTTGTAAGACGGGGAGATTCGCAGTGTTTTGCAGGT
ATGGAGGTATTTTCTCCTCACTTCACCCTATCACAGCCTATGCTCCTTGG
ATCTTCTGTCTTATAAGCAGCTTTGGTCTCGATGTTCGGTTTTGATTTTC
TGGTAAGACTCAGCCCAACACTCAACGAATGCGTATCGTATCAAACGCAC
GGCTGTTTTTGTATCATTGCGTTTTCCTCCGGTAGCCTCTCGCCTCGCGT
ACACCATCACACGCCACAACATATATCATTCTCAGTAGCAGTCCACCACA
CACATGAACTACTACCATCAACAGCAATGACCAGCTGAATAAGTGTTCAG
CAATGGTTCGCACACAGCAACGGCAGCAGCAACCGGCCGTTGTTAGTACG
CTGCCCAGGATGCAGCTATACGGGTACGCAAGCCTGGTTGAGGCTCAGCT
CGGGGAGAAACTAGAGGGCGCAGTTTAGTACTTCGTAGTGTCCGAAAGTC
TGCCACTGGGCATCGGTACAGAATAATAACAAGTGCAGTTCTAGATCGGG
GAGCGTCAGCGCGATTTTCTCGTAATTCGTTTTGACCTCCTAGCCCTGTC
AATATGGTAGTGTGAGACGGGAAAGTCTAGCAAGGCCTACGGTGAATAGC
CGTCACTCCGCGATATTTGAGAGCTGGCAACAGCATGGCGACCACTTTGA
TTACCGTTCTAGCCTCTCAGCGACGTATCCAGCCTGCTGTGAGCACTTGT
TTGAGGTTCCTTCTGTTTACCTGCAAGGTGCTCAAATGTGCATTCCCTCT
TCGATTACAGTAGGTCACAGCTGCAGCTTTTTGTATCTGGATCTCGGGTG
CAGAAGCCCTGGTTCTGGAAGCCGCGCTATTCGTGTACCCCGGCCGAAAA
AGCCCGGCCCTTCCAGCAGAGGCTTGCACTTGGATGTTCTCTTGCTCCAT
GTTCCCGGGTGATGATCATGTTTTCGGGCAATCTGTATCTGCTTGCGTGG
GTTCAAGGTACGACCAGCTACGCCTTGTTTGTGAGAGCCCGGTGCAACCA
CGGGGGTCGTCCCCTACAGTTTTTCACCAACTCGAAGAGGGGGAAATTGC
ACTGCTGTGAATGCTGAACCTTGGTTTGGTGCGAGGAACGTATTGCCTCA
GTGACGGAACTGCGGTATGTGGATAGTATGTCACCCGTCGTGAGGTCTGT
TTGCACTCTGCTCAAGGATCTTTAGACCTATGTTTATGTTTAGCTTCAGC
TCCACACCCTCATTTTAACCCTACCCCACGTCCCCAACCCAACCCAACCC
AACCCTTGTCCTATTCCTGACGACCGGCCAACGAAGAGCCGTGGTTGACA
CGATCGCGGCGCAGCCGCGGTCGTGGAACGCTGATGTTCTGCAGAACAGA
ACGCGGTTTGTTTCAGGCAAATATGAGGTTGGCCAATCAGAGGCCGTGAA
ACGCCATAGATGGGAAGATCCTCGAACGTAGTGTAAATACCGCTGCCCGT
CGCTGCCGCCGCTCGCTATCCGTCTCCCTTTTTCATTTCACCACAGGGCG
GACACGGGTGGTAAAGGTGCTTCTCCGGGCGGGCGCAAATATTGATGCTT
TGGACGACGCGAAGAAAGGGACGGCTCTCGGCTACGCCGCCTACGCGCTG
CACAACGACACAGTCACGGCACTCACCGAGGCGGGCGCTCGCCTGAAGGA
CGTCGAGGTGGACAAGTACGCCATTCACGGTGCCACCACCGCGCAAAACT
TGGGTATCGTGGAAGAGTTGGTCTCCGTCGGTGCCGACCTTGATGTCGGA
TTCCCCGACGACCAGAACCGCACCGCGCTCCATCTCGCCGTGGCCCATGG
GATGACTCTCGTGGCGCAAGTCCTGTTGAGAGCAGGATCGAACGTCAACC
AGACCGACGAGAGCGGATGCACCCCTTTGTACTCGGCGGCGTACGTCGGG
CATCTACAGTGCGCGGTCGAGCTCCTCAAGTTTGGGGCGGACATGCTGAT
CATGAACAACGACGGGAACAGCGCGCTCGAGGCTAGCAGCCAGGAGGGAC
ACGCCGCCATCGTCGAAGAGCTCCTGCGGCACGGCGTTCTGCGGTCGCCG
CCTCGGAGTACGGCAGCGTGGGTCGCTTTCGCGGCTCTTTGTGCGGCGGC
GAGGTCCGGACAGATGAAGACGGCTGACGTCTTGCTCAGAGCGGGCGTTC
CGCCCGTCCAGGAAGGCATCCATCGAAGCGGACCACTGTCGTGCGCGGCT
AGGGCGGGACACCTGGCGGTACGTTGTGCGCTTCCGTGATGTATGTCTGC
GTGCTGCGAGCGTACGTGTTTTTTGTTTGGGATGATCTGCCGGCGTGTTT
GGTCGTTGAGATTCTGTGACCCGCCGTCCACTTTCCTTGCACGGCACCAC
TTACACAATCGACATTCTTGTGCCTCGCATGCATTCTGCAAGGGACCGGG
TCGCAAGTCAACGCCCTTTCGTGGATGCGTGTCGATCAATCGCTGCGCCG
AGCGCTTGTCGCAACGGCGACACCCCGTCCGTAAATATACACGCTCAGTT
TGTCAATGAAGCCCCCACCGCGTTCGCCTGGCGATCGAAACCGCGTCAAC
ACAAAAGGTGGCGCGCCGAATCCTGAAGACGTCGGGAACCGTGGACGAGC
GAGATTCTCACGGCTGCACGCCCCTCATTCGAGCCTCGGAAGCGCTTCAG
CCTCGCCTGGTAGCCTTCCTGCTGGCGTCCGGAGCGGACTACACCATAAG
GTGCGATGTCTCGCGCCCAGCGCGTGCCGTTGAATTGCGCCTCCTGTGTG
CTGCACCTCGACACCGAGTTTTCTTGCGACTTCCACTCGTCAGCCCTGTC
TCTTGATGCTGCGGCCCCCGAGGATTTGAACTAGGGTTTTGCTTCACGAC
TGCCGTCCGCAGACTTTTCGTTGGTGCGTTGCTCATGGTTCGGCAGGTTT
CGGAAAAATGGCAGGGCCAAGAGAAACGTCACCAAGACGTTCCGAAAAAT
TGAAAGTGTCGAGCACAAATCACGCCAAACACTTTCCGCCCATTTCACCC
ACTCGAGTACAAACCGTCGCCTGCTTCTTGCTGCGCACGACGCAACATCG
TGCAGGAGCTCCTGCGGGTGCGACAAGGATGCTCTTATGAGCATCGGCGA
GAGCATGGGCCTTGACCCGGCTGCCGAAGAGCGCCCTGAAGCTCAGATTA
TCTCCGCCAAGCTAGCGACCCGACGCGTTCTGCTGCGAGGTGTCGCGTAC
CGAGCCATCTCGTGGGCATGGCCTACCGGTAGTCTGGGATTGACGAAGCA
CAGGGGCCGCAAAGATGTGACGGCTTCCGTCAGGGGTGGTGTCGTGAGCG
TGGTGTGGGGGAGGGAGCAGCAACGGCGAAGGCAGGCCGTTCTGAGCGCA
ATGTCTAGGTAAGCGCATCACATGCACCATGATCGCCGGAGTGCCCCGTT
CTTTTCTGAACCATATGCGGTACCGGGCACAACGTGTAGGCGAGAATAGA
CGGCAGTATTTGGTCGGAATGCGCGGGCTCGCTGTTCATTTCAAAGAAAT
TCCGCCACGCGAAGGCTAGCGAGGGCGCACTTCCTTTTGCGATATACGAA
GTAGTCACGTTCTTGGGGGATACCAGGTACAAATATGTATCGCTCTCAAA
TAATGATAATGAACAATAAATAGCGCTATTTATTTGGTTCGTCATGCCGA
ACAAATACGACAAAGGCTCACCCCCCGAACCGAAAATCCTTTCCCAAGAA
ACTTTTGGAGACATGCGGAGGACCCTTTCACCTGAAGCACGACTGCTGTG
AGCACAACTATAAAAATTTCAGCCCACCGTTCTCCTAAATCTATCTACAG
TAGTATCTAAGTTACTCTCTCGGGGTGGACCCTTCATTTGTGACGAACTG
TAATGAGAGGCGCTGCGGATGTTGACACTGTTGGCGGCATGCTCGTGAAG
CGATGGACAATTTGCAGCGTACGCAATGTCTGGCGTCCGCGACTCTTGCC
ACCTTAGGCAGGTGCATGCAGACCGTCTACCCTTCGTTTTTGATTGTTTG
AAAAGGCCAACAATTGATACATGTTGGGATTTCTCGAAACGGTTGTGGGG
CCCGCTTTTCACCACTGTGTATTTTTCGTCACGATCTGTTGATGATGTTC
GCACGTTGAGGACGAACGGGTTCTGCAGGGGCTGGCCTCCCGCCAACTAC
ATAGCAACCTTGTTGGCGAGACGTTATCGACCTCTTATCGCTACCAACAG
ACTTGTGTCAAATGTCAATACTAAAACAACGCCGTGCTGCCACCCCTTTC
CACCCCCCGTCTGTAACGCACAGGCATGCCGGCAAACCGGAACCCAAGAC
CAAACATAAGCGGCAACTAACGATGTGCAAGTTGCATTGACTTCGCGGCA
GCAACTGAGCGTTGTTTGTACCACGGCGCTATTGTGGCGCTTTAGAGCGG
TAATACTGCCAACGGTGGAGGTTGCAGGGGAAGGATTTGCGTTGTTCCGT
GTGTTTGTTTGTATGGCAACCGCCGCTGACTGACTGACCACTGAATATAC
GACAGTTTTAGAAAGACGTCTGTCACAAACATTCCAAAAGGGGTGGGGAA
CGTGCGGAAGGGTTACAGCCCCCGGATGAAGAAAACCCGTGCACCACTGT
TTGTGTGTGTGTTTGTGTGTGTGCGTGCGTGCGTGTGCCTGTGTGTGTGT
GTGTATGCGTTTTCACGTTTTTATCGCACAGCTGGTAGTTGCCCGGTCGG
AGTTCGGTCCGGTGCTAGGTACGGGTTCAGTAGACTGGCTTGTGATGTGG
CGTTCGGTTTTTCGCCATTCAAAACTAGCGATCTTTGGGTGCTACATCCT
TCGGAGCGTCGTTAACGTCGCATGCTTTGGGAGGACGACGAAGACACACC
CTTTGATATGTCGCTGGAAGGTGTCACGTGTTAGATACTTCGTACCAGGT
GGTGGTTCGTAGCGTATTTTCGTCGGAGTTGCCCACTTCAGAGTATGAAC
AAAGGCGAAGCCTGGAGTCAGCCTGCATGCTTTAGGTAGTAGTGCTGCAA
AAGTCAAAACTCGTTTGGTATGGGAAAATCAAGGACGGCCTTGTGTGCAA
ACCTGTATTGCATGTGTGGGACAGCATAATCTGCCTTTTTCTGCCGGCGA
TGCTGTAGTCTACGTCTTTCGAATACGGAGGGTTAAAAAATGCAGTCCCC
GTCGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig619:48618..60372+ >mRNA_P-littoralis_Contig619.14.2 ID=mRNA_P-littoralis_Contig619.14.2|Name=mRNA_P-littoralis_Contig619.14.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1374bp|location=Sequence derived from alignment at P-littoralis_Contig619:48618..60372+ (Pylaiella littoralis U1_48)
ATGAGCAACAGCGAACGTGACGTCAACAAGCTGGTATACCTGGGCAAGGC
AGATAGCGTGCAAAAGCTCATAAATTCTGGAGCTGATCCTGATGGCCGCT
TCAAGGGTGTGCCTCACATCATCGCTGCGGCTCGCGCAGGGCGGACACGG
GTGGTAAAGGTGCTTCTCCGGGCGGGCGCAAATATTGATGCTTTGGACGA
CGCGAAGAAAGGGACGGCTCTCGGCTACGCCGCCTACGCGCTGCACAACG
ACACAGTCACGGCACTCACCGAGGCGGGCGCTCGCCTGAAGGACGTCGAG
GTGGACAAGTACGCCATTCACGGTGCCACCACCGCGCAAAACTTGGGTAT
CGTGGAAGAGTTGGTCTCCGTCGGTGCCGACCTTGATGTCGGATTCCCCG
ACGACCAGAACCGCACCGCGCTCCATCTCGCCGTGGCCCATGGGATGACT
CTCGTGGCGCAAGTCCTGTTGAGAGCAGGATCGAACGTCAACCAGACCGA
CGAGAGCGGATGCACCCCTTTGTACTCGGCGGCGTACGTCGGGCATCTAC
AGTGCGCGGTCGAGCTCCTCAAGTTTGGGGCGGACATGCTGATCATGAAC
AACGACGGGAACAGCGCGCTCGAGGCTAGCAGCCAGGAGGGACACGCCGC
CATCGTCGAAGAGCTCCTGCGGCACGGCGTTCTGCGGTCGCCGCCTCGGA
GTACGGCAGCGTGGGTCGCTTTCGCGGCTCTTTGTGCGGCGGCGAGGTCC
GGACAGATGAAGACGGCTGACGTCTTGCTCAGAGCGGGCGTTCCGCCCGT
CCAGGAAGGCATCCATCGAAGCGGACCACTGTCGTGCGCGGCTAGGGCGG
GACACCTGGCGGTGGCGCGCCGAATCCTGAAGACGTCGGGAACCGTGGAC
GAGCGAGATTCTCACGGCTGCACGCCCCTCATTCGAGCCTCGGAAGCGCT
TCAGCCTCGCCTGGTAGCCTTCCTGCTGGCGTCCGGAGCGGACTACACCA
TAAGGAGCTCCTGCGGGTGCGACAAGGATGCTCTTATGAGCATCGGCGAG
AGCATGGGCCTTGACCCGGCTGCCGAAGAGCGCCCTGAAGCTCAGATTAT
CTCCGCCAAGCTAGCGACCCGACGCGTTCTGCTGCGAGGTGTCGCGTACC
GAGCCATCTCGTGGGCATGGCCTACCGGTAGTCTGGGATTGACGAAGCAC
AGGGGCCGCAAAGATGTGACGGCTTCCGTCAGGGGTGGTGTCGTGAGCGT
GGTGTGGGGGAGGGAGCAGCAACGGCGAAGGCAGGCCGTTCTGAGCGCAA
TGTCTAGGCATGCCGGCAAACCGGAACCCAAGACCAAACATAAGCGGCAA
CTAACGATGTGCAAGTTGCATTGA back to top
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