mRNA_P-littoralis_Contig618.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig618.23.1
Unique NamemRNA_P-littoralis_Contig618.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 721 bits (1861), Expect = 4.520e-259
Identity = 387/454 (85.24%), Postives = 401/454 (88.33%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELLRQA 1359
            LEDILLF+ARN+LAVDRV LRDAVRRLCNDGRRI WDP++GPGKDWLAGFLRRHPRVAERSTRIYEANR+TE+EE RMVQF+ER AALLDEVKP ANHVHNTDET+                    G  R     N  VVA ISAD HT APTIIFKGQRLQ DWF ERNGPEGA+YTCT SSFMQGDVFIAYLK FHKQLGDRGLLDGKPHILLLDGHASHVSVEV +LAMNLKII FQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGG LPLKRDMPGVIADAWK+SF PEINKSSFAGAGLWPVNK+RALG+LKGTA KKERRDERPPLQDVPIAA NEQLE DIGERALRVL+GQGHTVTGIR GTVLL GLLTQRK AK MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRA KAAAELLRQA
Sbjct:   45 LEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDETA--------------------GCSREPAATN--VVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRATKAAAELLRQA 476          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE)

HSP 1 Score: 622 bits (1604), Expect = 2.330e-219
Identity = 358/461 (77.66%), Postives = 374/461 (81.13%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDET------STTPQGTKTTKAFAESGQKVVGSMRSNLRENTT-VVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELLRQA 1359
            LEDILLF+ARN+LAVDRV L +     C+D                + G L    RV  R      A+          V  Y  R+A     +P +     +  T      S TPQGTKTTKAFAESGQKVVGSMRSN RENTT VV TISADGHTWAPTIIFKG RLQADWFVERNGPEGA+YTCTDSSFMQGDVFIAYLK FHKQ G+RGLLDGKPHILLLDGH+SHV VEV RLAMNLKIIL QLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK+SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERR ERPPLQDV +AA NEQLEKDIGERALRV RGQGHTVTGIRVGTVLLGGLLTQRKRAK MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELLR A
Sbjct:   66 LEDILLFAARNFLAVDRVQLSEM---RCDDSATT------------VGGSLGIQRRV--RGKIGLRAS---------FVGTYGWRSA-----RPASTRQTGSPRTRSLAWCSNTPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTANKKERRAERPPLQDVTMAALNEQLEKDIGERALRVPRGQGHTVTGIRVGTVLLGGLLTQRKRAKKMATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELLRHA 495          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 621 bits (1601), Expect = 7.230e-217
Identity = 315/436 (72.25%), Postives = 367/436 (84.17%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAK 1305
            +ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGFL RHPRV ER+TRIYEANR+T+E E R+V+FY + AALL+++KPEA+HVHNTDET TTPQG KT KA+ ++GQKVV S+R+N RENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NGP  A+YTCTDSSFMQG+VFI YLK FH+QL  RGL+DGKPHILLLDGHASHVSVEVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y  SGGLLP KRD+PGVIA AW  +FT E N+SSFAGAGLWPVN +RA+ RL+GTA++ E +  RPPL+DVPIA  NEQLE+DIGER +R L+  GH  TG+RV TV+LG ++ QRKRAK MATSRGSLGLPDGGNITA +FL  VAEKERADK ESDAKA RA+
Sbjct:   66 IEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGGNITAEDFLAKVAEKERADKEESDAKAERAR 500          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 603 bits (1555), Expect = 2.890e-213
Identity = 314/367 (85.56%), Postives = 325/367 (88.56%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTT-------PQGTKTTKAFAESGQ-------KVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEK 1059
            LE ILLF+ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRH RVAERSTRI+EAN ITE+EE RMVQFYER AALLDEVKPEANHVHNTDET          P+  +  +A             KVVGSMRSN RENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNG EGAKYTCTD SFMQGD+FIAYLK FHKQL DRGLLDGKPHILLLDGHASHVSVEVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVLASFY NSGGLLPLKRDMPGVIADAWK+SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERRDERPPLQDVPIAA NEQLEK
Sbjct:   66 LEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATKKERRDERPPLQDVPIAALNEQLEK 432          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 619 bits (1595), Expect = 1.420e-212
Identity = 314/436 (72.02%), Postives = 366/436 (83.94%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAK 1305
            +ED LL++ RN LAV R+ L + VR LC D R+ PWDPEKGPGKDWLAGFL RHPRV ER+TRIYEANR+T+E E R+V+FY + AALL+++KPEA+HVHNTDET TTPQG KT KA+ ++GQKVV S+R+N RENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NGP  A+YTCTDSSFMQG+VFI YLK FH+QL  RGL+DGKPHILLLDGHASHVSVEVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y  SGGLLP KRD+PGVIA AW  +FT E N+SSFAGAGLWPVN +RA+ RL+GTA++ E +  RPPL+DVPIA  NEQLE+DIGER +R L+  GH  TG+RV TV+LG ++ QRKRAK MATSRGSLGLPDG NITA +FL  VAEKERADK ESDAKA RA+
Sbjct:  307 IEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGANITAEDFLAKVAEKERADKEESDAKAERAR 741          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 590 bits (1520), Expect = 2.930e-207
Identity = 314/403 (77.92%), Postives = 329/403 (81.64%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRV---GTVLLGGLLTQRKRAKMATSRGSLG 1200
            LEDILLF+ARN+LAV RV LRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF RRHPRVAERSTRIYEANRITE+EE RMVQFYER AALLDE KPEANHVHNTDET TTPQGTKTTKAFAESGQKVVGSMR+N RENTTVVATISADGHTWAPTIIFKGQRLQAD FVERNGPEGA++TCTDSSFMQGDVF+ YLK FHKQLGDRGLLDGKPHILLLDGHASHVSVEVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKS                                     INKS FAGA LWPVNK+RALGRLKGTA+KKERRDER PLQD+PIAA NEQ EKDIG RALRVLRGQGHTVTGIR     T  L G  + ++R +    R   G
Sbjct:   66 LEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKS-------------------------------------INKSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTGIRTRRRATRRLRGQKSAKRRGQKKRPRSCCG 431          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE)

HSP 1 Score: 558 bits (1439), Expect = 1.470e-195
Identity = 299/401 (74.56%), Postives = 319/401 (79.55%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL------------------------------------------------LPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEK 1059
            L+DILLF+ARN+LAVDR+ L DAVR+LC+DGRRIPWDPEK PGKDWLAGFLRRHPRVAERSTRIYEANRITE+EE  MVQFYER AAL       +   +    T T     +T +AFAESGQKVVGSMRSN RENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGA+YTCTDS F Q +VFIAYLK FHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVL+SFYHNSGGL                                                LPL+RDMPGVIADAWK+SFTPEIN+SSFAGAGLWPVNK++ALGRLKGTA+KKERRDERPPLQDVPI A NEQLEK
Sbjct:   45 LKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAAL-------STRSNRRPTTCTI----RTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLERDMPGVIADAWKLSFTPEINQSSFAGAGLWPVNKEQALGRLKGTAKKKERRDERPPLQDVPITALNEQLEK 434          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5JIF7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF7_9PHAE)

HSP 1 Score: 552 bits (1423), Expect = 7.100e-194
Identity = 297/326 (91.10%), Postives = 304/326 (93.25%), Query Frame = 1
Query:  385 MRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELLRQA 1359
            MRSN  ENTTVVATISADGHTWAPTIIFKGQRLQAD F ERNGPEGA+YTCT SSFMQGDV IAYLK FHKQLGDRGLLDGKPH LLLDG ASHVSVEVIRLAMNLK ILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLA FYHNSGGLLPLK DMPGVIADAWK SFTPEINKSSFA AGLWPVNK+RALGRLKGTA+KKERR ERPPLQ VP+AA NEQLEKDIGERALR+LRGQGHTVTGIRVGTVLLGGLLTQRKRAK MATSR  LGLP+GGNITAPEFL AVAEKERADKAESDAKAAR KVREEK+AEKAAAELLRQA
Sbjct:    1 MRSNSLENTTVVATISADGHTWAPTIIFKGQRLQADGFEERNGPEGARYTCTGSSFMQGDVLIAYLKDFHKQLGDRGLLDGKPHKLLLDGLASHVSVEVIRLAMNLKTILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLAFFYHNSGGLLPLKCDMPGVIADAWKSSFTPEINKSSFAEAGLWPVNKERALGRLKGTAKKKERRGERPPLQVVPVAALNEQLEKDIGERALRLLRGQGHTVTGIRVGTVLLGGLLTQRKRAKKMATSRVLLGLPNGGNITAPEFLKAVAEKERADKAESDAKAARTKVREEKKAEKAAAELLRQA 326          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE)

HSP 1 Score: 538 bits (1385), Expect = 6.740e-187
Identity = 283/422 (67.06%), Postives = 323/422 (76.54%), Query Frame = 1
Query:   10 ILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPEINKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQLEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAK-MATSRGSLGLPDGGNITAPEFLDAVAEKERADK 1272
            +LL++ R+ LAV R+ L +  R+LCNDGR I WDP K PGKDWLAGFL+RHPRV+ER+TRIYE+NRITE++E R V++Y++ AAL DE KPEA+HVHNTDET TTPQGTKT KAFAE GQKVV SMRSN REN TVV TIS +G TWAPTIIFKGQRLQ DWF ERNGP+ A+YTCTDSSFMQGDVFI YLK F+KQL DRG+LDGKPHIL+L GHAS VS EVI+LAM L IILFQLPSHTSHITQPLDVVAFG FKK VT+VL  +YH +GG LPLKRD+P VIA AW+ SFTPE NK+SF GAGLWP                                     LE+ IGER LR L+  G T+TG++VGTV+LGGLLTQRKRAK + TSRGSLGLPDGGNI + EFL A   +ERA K
Sbjct:    7 VLLYAGRHCLAVGRLHLLETDRQLCNDGRSITWDPGKRPGKDWLAGFLKRHPRVSERTTRIYESNRITEDKEPRNVEYYKKWAALFDEHKPEADHVHNTDETGTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWP-------------------------------------LEEAIGERVLRQLKAGGQTITGLKVGTVMLGGLLTQRKRAKKLTTSRGSLGLPDGGNINSEEFL-AKVNRERARK 390          
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 508 bits (1309), Expect = 2.290e-177
Identity = 255/278 (91.73%), Postives = 261/278 (93.88%), Query Frame = 1
Query:    1 LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVHNTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL 834
            LEDILL +ARN+LAVDRV LRDAVRRLCNDGRRIPWDPEKGPGKDWL GFLRRHPRVAERSTRIYEANRITE+EE RMVQFYER AAL DEVKP+ANHVHNTDET TTPQGTKTTKAFAESGQKVVGSMRSN REN TVVATISADGHTWAPTI FK QRLQ DWFVERNGPEGA+YTCTDSSFMQGDVFIAYLK FHKQLGDRGLLDGKPHILL DGHASHVSVEVIRLAMNLKI+LFQLPSHTSHITQPLDVVAFGRFKKSV  VLASFYH SGGL
Sbjct:   66 LEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLHDGHASHVSVEVIRLAMNLKIVLFQLPSHTSHITQPLDVVAFGRFKKSVPSVLASFYHISGGL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig618.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2E0_9PHAE4.520e-25985.24DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JYS0_9PHAE2.330e-21977.66DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JV04_9PHAE7.230e-21772.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA3_9PHAE2.890e-21385.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE1.420e-21272.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JFM5_9PHAE2.930e-20777.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ5_9PHAE1.470e-19574.56DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JIF7_9PHAE7.100e-19491.10DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHG4_9PHAE6.740e-18767.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KJ62_9PHAE2.290e-17791.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig618contigP-littoralis_Contig618:101618..103701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LN28
PFAMsDDE_1
Model size1359
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.2e-93
EggNOG OGs2CZS4@1|root,2SBGG@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size1359
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791286.4825723-CDS-P-littoralis_Contig618:101617..1019331680791286.4825723-CDS-P-littoralis_Contig618:101617..101933Pylaiella littoralis U1_48CDSP-littoralis_Contig618 101618..101933 +
1680791286.4945447-CDS-P-littoralis_Contig618:102658..1037011680791286.4945447-CDS-P-littoralis_Contig618:102658..103701Pylaiella littoralis U1_48CDSP-littoralis_Contig618 102659..103701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig618.23.1prot_P-littoralis_Contig618.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig618 101618..103701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig618.23.1

>prot_P-littoralis_Contig618.23.1 ID=prot_P-littoralis_Contig618.23.1|Name=mRNA_P-littoralis_Contig618.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=453bp
LEDILLFSARNYLAVDRVPLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGF
LRRHPRVAERSTRIYEANRITEEEESRMVQFYERRAALLDEVKPEANHVH
NTDETSTTPQGTKTTKAFAESGQKVVGSMRSNLRENTTVVATISADGHTW
APTIIFKGQRLQADWFVERNGPEGAKYTCTDSSFMQGDVFIAYLKFFHKQ
LGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQ
PLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKVSFTPE
INKSSFAGAGLWPVNKDRALGRLKGTAQKKERRDERPPLQDVPIAAPNEQ
LEKDIGERALRVLRGQGHTVTGIRVGTVLLGGLLTQRKRAKMATSRGSLG
LPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRAEKAAAELL
RQA
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mRNA from alignment at P-littoralis_Contig618:101618..103701+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig618.23.1 ID=mRNA_P-littoralis_Contig618.23.1|Name=mRNA_P-littoralis_Contig618.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2084bp|location=Sequence derived from alignment at P-littoralis_Contig618:101618..103701+ (Pylaiella littoralis U1_48)
CTGGAAGATATTCTGCTGTTTTCTGCTCGCAACTACTTGGCTGTGGATCG GGTTCCCCTCAGAGATGCGGTGCGACGACTCTGCAACGACGGACGGCGGA TTCCTTGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTC CTTCGTAGGCACCCACGGGTGGCGGAGCGCTCGACCCGCATCTACGAGGC AAACAGGATCACCGAAGAAGAGGAGTCTCGCATGGTGCAGTTCTACGAGA GACGGGCAGCTCTCCTCGACGAAGTCAAACCGGAGGCCAACCACGTGCAC AACACGGACGAGACTAGTATAGTGTAGATACAGTAGTAGAAATGTGGCAG TAGAAACTGCTCGGGTGACTGCTGTGCAAAGACCACGAAACATGTCCCAC GAAAAATATCAGGCAGAGTTCTGCCCCCTTGCGGCGTTATTTTGGCCTCC TCATGTACTGCTGTAGTGTAGTCTACAGAGGCCGTGCTCCCGCATTCCTG CTCAAAAATGCCGAAATTGCCGCTGACTCTGGTCTAGATTACCGGTAGGC TACAGCAGTAGTTCCAGACACAAAAGTAGAGTACAGCACTGGTTCCAGAC AATGTACTGCTGTAGACTATGGTACTCTAAAATACAATATTTTCAGAGCT GCATCGCATCGTCTTCAGCTGGTAGTTCGAGGGAACCTGCGGCGACGAAC GTGTAACTTAGTCTTGTCTAGGGGAGCGATGTTGAGTAGATGCATGTGCC AACACATTAAAGAATCTAGGCTAGTCTACAGCACCCTGCTTTTGCTCTCC CGGTTGCCTCGTCCAGCTATGATACCGCCACAATGACGGTAGACTGCGTA GGTTGAAAGCCCTCGCCGCACAAAAATAAATGAAAAAGAGCCACCGCGTG TCCCTCCCCCGTCCACCCCCGTTGCTTGGCGCGCACGATATTGACTGTAA ATGTTTGGCTGCGTGCGTACACTACTGCTGGTAATTTTGACTATCCATTA GACTACCCCCCCCGACCCTCACATACGCGTTCCCGTTGCAGGTACCACTC CGCAAGGAACCAAGACGACGAAGGCTTTTGCGGAATCAGGGCAGAAGGTG GTTGGTTCGATGCGCTCCAACTTGCGAGAGAACACCACCGTGGTCGCTAC CATCAGCGCTGATGGTCACACCTGGGCACCAACCATTATCTTCAAAGGGC AACGACTTCAGGCCGATTGGTTTGTAGAGCGAAACGGCCCCGAGGGTGCA AAGTACACCTGTACGGATTCTTCGTTCATGCAGGGAGACGTTTTCATCGC CTACTTGAAGTTTTTCCACAAGCAGCTCGGCGACCGAGGGTTGCTCGACG GAAAACCCCACATACTCTTGCTCGATGGACATGCATCACACGTGAGCGTG GAGGTAATCAGGCTGGCCATGAATCTCAAAATCATCTTGTTCCAGCTACC CTCCCACACGTCGCACATCACCCAGCCCTTGGATGTCGTCGCCTTCGGAC GCTTTAAGAAATCGGTGACCAGAGTCTTGGCGTCCTTCTACCACAACTCC GGCGGGTTGTTGCCGCTGAAACGCGACATGCCCGGCGTGATCGCGGATGC TTGGAAAGTGAGCTTTACACCGGAGATAAACAAATCATCATTCGCTGGGG CGGGGTTGTGGCCTGTGAACAAGGACCGGGCGCTGGGCCGGCTGAAGGGC ACAGCGCAGAAGAAAGAGCGGCGAGACGAGCGCCCACCCCTACAGGATGT CCCCATCGCCGCCCCCAACGAGCAGCTGGAAAAAGACATCGGAGAAAGGG CCCTCAGGGTGCTGAGGGGGCAAGGGCACACCGTCACGGGAATCCGAGTA GGCACGGTGTTACTCGGTGGCCTCTTGACTCAAAGGAAGCGCGCGAAGAT GGCGACCTCGCGGGGCTCGCTTGGCCTTCCCGACGGAGGCAACATTACCG CGCCTGAGTTCCTGGACGCTGTTGCAGAAAAAGAACGCGCAGACAAGGCG GAGAGCGACGCGAAGGCTGCGAGGGCGAAAGTCCGCGAAGAGAAGAGGGC AGAAAAAGCGGCCGCGGAGCTGTTGCGGCAGGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig618:101618..103701+

>mRNA_P-littoralis_Contig618.23.1 ID=mRNA_P-littoralis_Contig618.23.1|Name=mRNA_P-littoralis_Contig618.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1359bp|location=Sequence derived from alignment at P-littoralis_Contig618:101618..103701+ (Pylaiella littoralis U1_48)
CTGGAAGATATTCTGCTGTTTTCTGCTCGCAACTACTTGGCTGTGGATCG
GGTTCCCCTCAGAGATGCGGTGCGACGACTCTGCAACGACGGACGGCGGA
TTCCTTGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTC
CTTCGTAGGCACCCACGGGTGGCGGAGCGCTCGACCCGCATCTACGAGGC
AAACAGGATCACCGAAGAAGAGGAGTCTCGCATGGTGCAGTTCTACGAGA
GACGGGCAGCTCTCCTCGACGAAGTCAAACCGGAGGCCAACCACGTGCAC
AACACGGACGAGACTAGTACCACTCCGCAAGGAACCAAGACGACGAAGGC
TTTTGCGGAATCAGGGCAGAAGGTGGTTGGTTCGATGCGCTCCAACTTGC
GAGAGAACACCACCGTGGTCGCTACCATCAGCGCTGATGGTCACACCTGG
GCACCAACCATTATCTTCAAAGGGCAACGACTTCAGGCCGATTGGTTTGT
AGAGCGAAACGGCCCCGAGGGTGCAAAGTACACCTGTACGGATTCTTCGT
TCATGCAGGGAGACGTTTTCATCGCCTACTTGAAGTTTTTCCACAAGCAG
CTCGGCGACCGAGGGTTGCTCGACGGAAAACCCCACATACTCTTGCTCGA
TGGACATGCATCACACGTGAGCGTGGAGGTAATCAGGCTGGCCATGAATC
TCAAAATCATCTTGTTCCAGCTACCCTCCCACACGTCGCACATCACCCAG
CCCTTGGATGTCGTCGCCTTCGGACGCTTTAAGAAATCGGTGACCAGAGT
CTTGGCGTCCTTCTACCACAACTCCGGCGGGTTGTTGCCGCTGAAACGCG
ACATGCCCGGCGTGATCGCGGATGCTTGGAAAGTGAGCTTTACACCGGAG
ATAAACAAATCATCATTCGCTGGGGCGGGGTTGTGGCCTGTGAACAAGGA
CCGGGCGCTGGGCCGGCTGAAGGGCACAGCGCAGAAGAAAGAGCGGCGAG
ACGAGCGCCCACCCCTACAGGATGTCCCCATCGCCGCCCCCAACGAGCAG
CTGGAAAAAGACATCGGAGAAAGGGCCCTCAGGGTGCTGAGGGGGCAAGG
GCACACCGTCACGGGAATCCGAGTAGGCACGGTGTTACTCGGTGGCCTCT
TGACTCAAAGGAAGCGCGCGAAGATGGCGACCTCGCGGGGCTCGCTTGGC
CTTCCCGACGGAGGCAACATTACCGCGCCTGAGTTCCTGGACGCTGTTGC
AGAAAAAGAACGCGCAGACAAGGCGGAGAGCGACGCGAAGGCTGCGAGGG
CGAAAGTCCGCGAAGAGAAGAGGGCAGAAAAAGCGGCCGCGGAGCTGTTG
CGGCAGGCG
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