prot_P-littoralis_Contig617.31.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig617.31.2
Unique Nameprot_P-littoralis_Contig617.31.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length239
Homology
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: D7FS51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS51_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 5.020e-78
Identity = 145/207 (70.05%), Postives = 166/207 (80.19%), Query Frame = 0
Query:    1 MASMRAGVVS-LLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVPSSLRHSGSSSRVGPQCSSSGSSKQXXXXXXXXXQRSGLSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMAAQRE 206
            M++MR+GVVS LLRRAFA RRPP+  TS SFS     + + ++P+      ++ R   + S SG+            QR+GLSTLRRGL+GP SARLRLPMRGLEEFRDPEVVKAGDVPIVGR+W+V ELRRKSFEDLHKLWFVLYKEKNML +QVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRA + ERQ+AA+RE
Sbjct:    1 MSAMRSGVVSCLLRRAFAVRRPPVVSTSSSFSP----ICSTTIPA------AAPRSTAERSCSGNQH-----VPHRHQRAGLSTLRRGLTGPLSARLRLPMRGLEEFRDPEVVKAGDVPIVGRSWTVPELRRKSFEDLHKLWFVLYKEKNMLMSQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAALRERQLAAKRE 192          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A6H5KQ57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ57_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 5.820e-40
Identity = 88/143 (61.54%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    1 MASMRAGVVS-LLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVP-SSLRHSGSSSRVGPQCSSSGSSKQXXXXXXXXXQRSGLSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLW 141
            M++MR+GVVS LLRRAFA RRPP+  TS SFS         + P S+   S S S+  P                   QR+GLSTLRRGL+GP SARLRLPMRGLEEFRDPEVVKAGDVPIVGR+W+V ELRRKSFEDLHKLW
Sbjct:    1 MSAMRSGVVSSLLRRAFAVRRPPMVSTSSSFSPICSTTIPAAAPRSTAERSWSGSQHVPH----------------RRQRAGLSTLRRGLTGPLSARLRLPMRGLEEFRDPEVVKAGDVPIVGRSWTVPELRRKSFEDLHKLW 127          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A835YLR8_9STRA (Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.000e-25
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 0
Query:   81 LSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKV-PIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMA 202
            +  LRRG  GP SA  RLP RGLEEF D +  +  D PI GR W+V ELR+KSF+DLHKLW+VLYKEKN+L T+ +++RR     + A DR +KV  SMKA++ VV ER++ +  +  +++ A
Sbjct:    6 VGALRRGAVGPASAASRLPRRGLEEFIDNDTRRGAD-PIAGRAWTVTELRQKSFDDLHKLWWVLYKEKNLLLTEKLVTRRKGGNELRAPDRAKKVSMSMKAVRHVVDEREKRRMQIKADKEAA 127          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2UD47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD47_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.570e-22
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:  103 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVK 192
            L+ F DP   +A    +VGR WSV+ELRRKSF+DLH+LWFVLY+E+NML T+    RR  + +P  DRR KVK+SM AIK V+GER+R K
Sbjct:   59 LDAFMDPAAYEARQTEMVGRAWSVRELRRKSFDDLHRLWFVLYQERNMLLTEAAKCRRKGMYLPQPDRRHKVKKSMGAIKHVLGERKRDK 148          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2SBW9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SBW9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.740e-22
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 0
Query:  102 GLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 190
            GL  FRD E  +      VGR+WSV+ELRRKSFEDLHKLW+V+Y E+NM+ T+  LSRR  +  P  +R+ KVK+SM AIK V+GER+R
Sbjct:   30 GLNAFRDSESNQTRQSETVGRSWSVKELRRKSFEDLHKLWYVMYMERNMIFTESNLSRRRGIIFPQPERQTKVKKSMAAIKTVLGERKR 118          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2MMC9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MMC9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.400e-21
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0
Query:   90 GPHSARLRLPMRG---LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 190
            G  S   ++P  G   L+ FRD    +A    +VGR+W+V+ELRRKSFEDLH LWFVLYKE NML T+  LSRR  +  P  DR++KVK+SM AIK V+GER+R
Sbjct:  135 GAESTDGKVPNHGNSPLDAFRDSVTREARAKEMVGRSWTVKELRRKSFEDLHSLWFVLYKEWNMLLTEANLSRRKGIVFPQPDRKRKVKKSMGAIKQVLGERKR 238          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S1GS69_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GS69_CYCTE)

HSP 1 Score: 97.4 bits (241), Expect = 1.520e-21
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  103 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMA 202
            L+EFRD          +VGR+WSV+ELRRKSF+DLHKLW+VLYKE+NML T+  L R+  + +P  +R +KVK+SM AIK V+GER+R K A ++  + A
Sbjct:   33 LDEFRDSVSRDKRQREMVGRSWSVKELRRKSFDDLHKLWYVLYKERNMLFTESALLRQRGLRMPQPERARKVKKSMGAIKAVLGERKRAKIAQVNAARRA 132          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A1Z5KBJ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBJ8_FISSO)

HSP 1 Score: 95.9 bits (237), Expect = 3.380e-21
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 0
Query:  103 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQM 201
            L EFRDP   +      VGR+WS +ELRRKSF+DLHKLW VLYKE NML T+  LSRR  +  P  DR QKVK+S+ AI+ V+GER+R K + +  +QM
Sbjct:   42 LSEFRDPVSRQQRMNEPVGRSWSARELRRKSFDDLHKLWLVLYKENNMLLTEQQLSRRRGIIFPQPDRIQKVKKSLGAIRQVMGERKREKLSQMALQQM 140          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S4ALY4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALY4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.100e-20
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  103 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 190
            L+ FRDP   +      VGR WSV+ELRRKS+EDLH+LW+VLYKEKNML T+  LSRR ++  P  DR +KV++SM AI+ V+GER+R
Sbjct:   81 LDAFRDPVGRQTRMEQPVGRQWSVKELRRKSYEDLHRLWYVLYKEKNMLLTEQQLSRRRQLIFPQPDRFKKVQKSMGAIRQVLGERKR 168          
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A6U3P2T2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P2T2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.280e-20
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0
Query:  103 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 190
            L+ FRD     A    +VGR+W+V+ELRRKSF+DLH LWFVLYKE NML T+  LSRR  +  P  +R+ KVK+SM AIK V+GER+R
Sbjct:   67 LDAFRDSVTRDARMNELVGRSWTVKELRRKSFDDLHSLWFVLYKEYNMLLTEANLSRRKGLVFPQPERKVKVKKSMGAIKHVLGERKR 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS51_ECTSI5.020e-7870.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ57_9PHAE5.820e-4061.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLR8_9STRA4.000e-2550.41Mitochondrial 39-S ribosomal protein L47 (MRP-L47)... [more]
A0A7S2UD47_9STRA1.570e-2257.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2SBW9_9STRA4.740e-2257.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2MMC9_9STRA1.400e-2154.81Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1GS69_CYCTE1.520e-2153.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5KBJ8_FISSO3.380e-2155.56Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4ALY4_9STRA4.100e-2057.95Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A6U3P2T2_9STRA4.280e-2057.95Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038340MRP-L47 superfamily, mitochondrialGENE3D6.10.330.20coord: 99..211
e-value: 9.9E-24
score: 85.2
IPR010729Ribosomal protein L47, mitochondrialPFAMPF06984MRP-L47coord: 113..188
e-value: 8.0E-23
score: 80.4
IPR010729Ribosomal protein L47, mitochondrialPANTHERPTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDcoord: 78..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..65
NoneNo IPR availableCDDcd00427Ribosomal_L29_HIPcoord: 127..188
e-value: 5.58497E-4
score: 35.1559
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILY46561Ribosomal protein L29 (L29p)coord: 125..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig617contigP-littoralis_Contig617:82873..89664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig617.31.2mRNA_P-littoralis_Contig617.31.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig617 82855..91017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig617.31.2 ID=prot_P-littoralis_Contig617.31.2|Name=mRNA_P-littoralis_Contig617.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp
MASMRAGVVSLLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVPSSLRHSG
SSSRVGPQCSSSGSSKQQHKHKEKQQQRSGLSTLRRGLSGPHSARLRLPM
RGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNM
LQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQ
MAAQREKREAAAAAAAAAAESEEAALEEGKSQGAATTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038340MRP-L47_sf
IPR010729Ribosomal_L47_mit
IPR036049Ribosomal_L29/L35_sf