mRNA_P-littoralis_Contig617.31.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig617.31.2
Unique NamemRNA_P-littoralis_Contig617.31.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: D7FS51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS51_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.000e-72
Identity = 145/207 (70.05%), Postives = 166/207 (80.19%), Query Frame = 1 
Query:   19 MASMRAGVVS-LLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVPSSLRHSGSSSRVGPQCSSSGSSKQXXXXXXXXXQRSGLSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMAAQRE 636
            M++MR+GVVS LLRRAFA RRPP+  TS SFS     + + ++P+      ++ R   + S SG+            QR+GLSTLRRGL+GP SARLRLPMRGLEEFRDPEVVKAGDVPIVGR+W+V ELRRKSFEDLHKLWFVLYKEKNML +QVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRA + ERQ+AA+RE
Sbjct:    1 MSAMRSGVVSCLLRRAFAVRRPPVVSTSSSFSP----ICSTTIPA------AAPRSTAERSCSGNQH-----VPHRHQRAGLSTLRRGLTGPLSARLRLPMRGLEEFRDPEVVKAGDVPIVGRSWTVPELRRKSFEDLHKLWFVLYKEKNMLMSQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAALRERQLAAKRE 192
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A6H5KQ57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ57_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.660e-36
Identity = 88/143 (61.54%), Postives = 99/143 (69.23%), Query Frame = 1 
Query:   19 MASMRAGVVS-LLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVP-SSLRHSGSSSRVGPQCSSSGSSKQXXXXXXXXXQRSGLSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLW 441
            M++MR+GVVS LLRRAFA RRPP+  TS SFS         + P S+   S S S+  P                   QR+GLSTLRRGL+GP SARLRLPMRGLEEFRDPEVVKAGDVPIVGR+W+V ELRRKSFEDLHKLW
Sbjct:    1 MSAMRSGVVSSLLRRAFAVRRPPMVSTSSSFSPICSTTIPAAAPRSTAERSWSGSQHVPH----------------RRQRAGLSTLRRGLTGPLSARLRLPMRGLEEFRDPEVVKAGDVPIVGRSWTVPELRRKSFEDLHKLW 127
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A835YLR8_9STRA (Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.170e-23
Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1 
Query:  259 LSTLRRGLSGPHSARLRLPMRGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKV-PIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMA 624
            +  LRRG  GP SA  RLP RGLEEF D +  +  D PI GR W+V ELR+KSF+DLHKLW+VLYKEKN+L T+ +++RR     + A DR +KV  SMKA++ VV ER++ +  +  +++ A
Sbjct:    6 VGALRRGAVGPASAASRLPRRGLEEFIDNDTRRGAD-PIAGRAWTVTELRQKSFDDLHKLWWVLYKEKNLLLTEKLVTRRKGGNELRAPDRAKKVSMSMKAVRHVVDEREKRRMQIKADKEAA 127
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2UD47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD47_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.370e-20
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:  325 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVK 594
            L+ F DP   +A    +VGR WSV+ELRRKSF+DLH+LWFVLY+E+NML T+    RR  + +P  DRR KVK+SM AIK V+GER+R K
Sbjct:   59 LDAFMDPAAYEARQTEMVGRAWSVRELRRKSFDDLHRLWFVLYQERNMLLTEAAKCRRKGMYLPQPDRRHKVKKSMGAIKHVLGERKRDK 148
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2SBW9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SBW9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.330e-20
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 1 
Query:  322 GLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 588
            GL  FRD E  +      VGR+WSV+ELRRKSFEDLHKLW+V+Y E+NM+ T+  LSRR  +  P  +R+ KVK+SM AIK V+GER+R
Sbjct:   30 GLNAFRDSESNQTRQSETVGRSWSVKELRRKSFEDLHKLWYVMYMERNMIFTESNLSRRRGIIFPQPERQTKVKKSMAAIKTVLGERKR 118
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S1GS69_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GS69_CYCTE)

HSP 1 Score: 97.4 bits (241), Expect = 1.070e-19
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 1 
Query:  325 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQMA 624
            L+EFRD          +VGR+WSV+ELRRKSF+DLHKLW+VLYKE+NML T+  L R+  + +P  +R +KVK+SM AIK V+GER+R K A ++  + A
Sbjct:   33 LDEFRDSVSRDKRQREMVGRSWSVKELRRKSFDDLHKLWYVLYKERNMLFTESALLRQRGLRMPQPERARKVKKSMGAIKAVLGERKRAKIAQVNAARRA 132
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S2MMC9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MMC9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.300e-19
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 1 
Query:  286 GPHSARLRLPMRG---LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 588
            G  S   ++P  G   L+ FRD    +A    +VGR+W+V+ELRRKSFEDLH LWFVLYKE NML T+  LSRR  +  P  DR++KVK+SM AIK V+GER+R
Sbjct:  135 GAESTDGKVPNHGNSPLDAFRDSVTREARAKEMVGRSWTVKELRRKSFEDLHSLWFVLYKEWNMLLTEANLSRRKGIVFPQPDRKRKVKKSMGAIKQVLGERKR 238
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A1Z5KBJ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBJ8_FISSO)

HSP 1 Score: 95.9 bits (237), Expect = 2.060e-19
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 1 
Query:  325 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQM 621
            L EFRDP   +      VGR+WS +ELRRKSF+DLHKLW VLYKE NML T+  LSRR  +  P  DR QKVK+S+ AI+ V+GER+R K + +  +QM
Sbjct:   42 LSEFRDPVSRQQRMNEPVGRSWSARELRRKSFDDLHKLWLVLYKENNMLLTEQQLSRRRGIIFPQPDRIQKVKKSLGAIRQVMGERKREKLSQMALQQM 140
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A6U3P2T2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P2T2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.220e-18
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 1 
Query:  325 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 588
            L+ FRD     A    +VGR+W+V+ELRRKSF+DLH LWFVLYKE NML T+  LSRR  +  P  +R+ KVK+SM AIK V+GER+R
Sbjct:   67 LDAFRDSVTRDARMNELVGRSWTVKELRRKSFDDLHSLWFVLYKEYNMLLTEANLSRRKGLVFPQPERKVKVKKSMGAIKHVLGERKR 154
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BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Match: A0A7S4ALY4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALY4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.440e-18
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 1 
Query:  325 LEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNMLQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQR 588
            L+ FRDP   +      VGR WSV+ELRRKS+EDLH+LW+VLYKEKNML T+  LSRR ++  P  DR +KV++SM AI+ V+GER+R
Sbjct:   81 LDAFRDPVGRQTRMEQPVGRQWSVKELRRKSYEDLHRLWYVLYKEKNMLLTEQQLSRRRQLIFPQPDRFKKVQKSMGAIRQVLGERKR 168
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig617.31.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS51_ECTSI2.000e-7270.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ57_9PHAE1.660e-3661.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLR8_9STRA6.170e-2350.41Mitochondrial 39-S ribosomal protein L47 (MRP-L47)... [more]
A0A7S2UD47_9STRA1.370e-2057.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2SBW9_9STRA3.330e-2057.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1GS69_CYCTE1.070e-1953.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2MMC9_9STRA1.300e-1954.81Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5KBJ8_FISSO2.060e-1955.56Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A6U3P2T2_9STRA2.220e-1857.95Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4ALY4_9STRA2.440e-1857.95Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig617contigP-littoralis_Contig617:82855..91017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FS51
Preferred nameMRPL47
PFAMsMRP-L47
Model size2088
Max annot lvl2759|Eukaryota
KEGG koko:K17428
Hectar predicted targeting categorymitochondrion
GOsGO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons4
Evalue8.22e-79
EggNOG OGsKOG3331@1|root,KOG3331@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L47, mitochondrial
Ec32 orthologEc-16_004340.1
Descriptionmitochondrial translation
Cds size717
COG categoryJ
BRITEbr01610,ko00000,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig617.31.2prot_P-littoralis_Contig617.31.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig617 82873..89664 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791284.877124-UTR-P-littoralis_Contig617:82854..828721680791284.877124-UTR-P-littoralis_Contig617:82854..82872Pylaiella littoralis U1_48UTRP-littoralis_Contig617 82855..82872 +
1680791284.9416714-UTR-P-littoralis_Contig617:89664..910171680791284.9416714-UTR-P-littoralis_Contig617:89664..91017Pylaiella littoralis U1_48UTRP-littoralis_Contig617 89665..91017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791284.8907983-CDS-P-littoralis_Contig617:82872..832111680791284.8907983-CDS-P-littoralis_Contig617:82872..83211Pylaiella littoralis U1_48CDSP-littoralis_Contig617 82873..83211 +
1680791284.9022195-CDS-P-littoralis_Contig617:87307..873901680791284.9022195-CDS-P-littoralis_Contig617:87307..87390Pylaiella littoralis U1_48CDSP-littoralis_Contig617 87308..87390 +
1680791284.920016-CDS-P-littoralis_Contig617:88544..886411680791284.920016-CDS-P-littoralis_Contig617:88544..88641Pylaiella littoralis U1_48CDSP-littoralis_Contig617 88545..88641 +
1680791284.9300954-CDS-P-littoralis_Contig617:89466..896641680791284.9300954-CDS-P-littoralis_Contig617:89466..89664Pylaiella littoralis U1_48CDSP-littoralis_Contig617 89467..89664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig617.31.2

>prot_P-littoralis_Contig617.31.2 ID=prot_P-littoralis_Contig617.31.2|Name=mRNA_P-littoralis_Contig617.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp
MASMRAGVVSLLRRAFAARRPPLGMTSCSFSSSVRCLTAVSVPSSLRHSG
SSSRVGPQCSSSGSSKQQHKHKEKQQQRSGLSTLRRGLSGPHSARLRLPM
RGLEEFRDPEVVKAGDVPIVGRNWSVQELRRKSFEDLHKLWFVLYKEKNM
LQTQVVLSRRSKVPIPAGDRRQKVKRSMKAIKVVVGERQRVKRAVIHERQ
MAAQREKREAAAAAAAAAAESEEAALEEGKSQGAATTW*
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mRNA from alignment at P-littoralis_Contig617:82855..91017+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig617.31.2 ID=mRNA_P-littoralis_Contig617.31.2|Name=mRNA_P-littoralis_Contig617.31.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8163bp|location=Sequence derived from alignment at P-littoralis_Contig617:82855..91017+ (Pylaiella littoralis U1_48)
GCAACAAGTAGTAGCGTTATGGCATCGATGCGTGCCGGGGTGGTCTCGCT
CTTACGTCGAGCTTTTGCTGCTCGTCGGCCACCATTAGGCATGACCTCTT
GCTCTTTTTCCTCCTCCGTTCGTTGTTTGACGGCCGTCTCAGTACCCTCC
TCGCTTCGTCACTCCGGCAGCAGCAGCAGGGTAGGACCGCAGTGCTCCAG
TAGTGGCAGCAGCAAGCAGCAGCACAAGCACAAGGAGAAGCAGCAGCAGC
GGTCAGGGTTGTCGACGCTGCGAAGGGGGCTGAGCGGGCCTCATTCGGCG
AGGCTGCGGCTGCCCATGCGAGGCCTAGAGGAGTTCCGCGATCCAGAGGT
TGTCAAGGTCAGGCATTAGTACCCGGCGCCCGGCGCTGTTCTTTTACGTA
CATATCATGATACAGCAGTATCCTGTAGCACACCCAACAGCCCCAGCAGT
CAACCGCACTTGCCCACACCACGAACCCCTCCATCCTTTTCAAAGCTTGA
CCTCAATTTCGTACAACGCTACCCCGCGATGAAGAGTGGGGGCATGATTA
CATCACAATCCACCCAGTAGTACCTCCTCTGGACGAGATGGTTTCAAACA
GGGATGTACATTACGCGTTACCCGTAATTACCCGTAATGATGTTGGGACG
TACGAAACGTTAATTATAGGTTGTGTTAGCCGGTATTTTTGGCGGTGCCC
CCTCATACCCCCTATTTCAACCAACAAGGcCCCCCCCGCAAATTCAAATC
AGCAGCAGACAGCAGACCAGCACAAACAAAAGCAGCAGCACAGCAGCCGA
CCACGTCATGAGCGAGCAGAACCCCATCACCATTCATAGCGAGCCCGATG
GTCTCAAGGGTCGGCCAGCCCTCATGTTTCTGGTTACGGACGTGAAGCCA
TCGGTTGACCAGTCCAAGAGGAGCGTCAAGTGCAAGCTGTGCGAGAAGAC
GTTCGTGGGCGTGACCGAGCGGATGGCGGCTCACTTTGCCAAGAAAACAT
GTTTCGGCGTCAAGAAGTGCACTGCAGCACCCTGAAGCACTTGACACGGA
ATCCCCCGGGGGAGTGCGACACACGGAACCCCCGGGGATGGGACGCTTTC
ATCCCCTTGCGGTAGCCGTAACGTCGCGTACGTAACGTAAATCGCTGATT
TGCCGTAATTGCGGTACGTAACGTGGACAATCTGCGGTAATGTACATCCC
TGGTTTCAAATACCGCACCAACATCGGTCGCCCCGGTGGTCTAGTCAGTA
GCCTACGCGGACCCATTTCAGAAAACATGAAGGATAAAGAATGGAAATAA
CCGAATATAATCTCGCCGCCTGCGCGCGGAGGTGTGTCGGATCCGATTGG
CCTTGGTTATGGGAAAAGGCCCCAAGTGTCGGGGTTGGGTTAGGGTTAGG
GTTAGCGTTAGCGTTAGTAGACAGCCCTGGGCATCAGATCAACTTTTTTT
TTTACTCGGTTCATTTTTCTGACAGAAGCTTACATTAAGGGCAAACTATG
GGAAAAAAGTCGGCCAATCCTATACTTTATCCTACATGCTGACTTAATCA
AGCTGCGAAGGCAGTCCGGTCTAGGTTCCCTCGTTAACCCTCCTGGGACC
AGGGTGTTTTGTTCCTTTTCACACGAACAGCCCGGGTTCCAAATCAAAAC
CATACAATGTTCCCCCGAGAAAAAATACATATGGCTCAAATCTCCCTTTC
AAATGTACAGCAGTCACGAAACCAGGAGAAAATGTACACAACCGCACCAC
AAAGATATACAGCCAGGGCCCCTGACGGGGGCTTACAGCGGGCTGGTTAC
GTCCCTGGAGAGTACAGAAGAGATACCCGGTGGTCGAGATGCCGCGGCTA
GCTCTCAGGCGTCGTGCAACGTGTTCTAACCATCAATAGCGCTCAAAGTA
TCCAGCAAAACAAGATAATAAGGAAAAAGAGTTACTGCTAAGGAGTTACT
CGTTTCCCGCTGTAGCTCCCGGCCTGTTAAACGTACTTTTGCGTAGGGGC
CCCGTGGCCTGCGGCCGGCCTGAAGGCTGGTTCTTCCTTCTGGCACACAG
GCACATCATTGGTACTGGTAGCGGCAGCGGCAGCAGCCGCAGTAGCAGTA
TTCTAGCAACTCCATGATGTTCATACATAGAGGTATGACTCTCTACTACT
ACTGCTCTTCTTTCTTGTTGTGTCATACCAACAAGGGAGGAGGTATCATA
TGGCATGTGATGTACTGCTGTACAGCAGCGGCAGTAGTAGCAGTAGTTGT
GGTAAGAGTAGTGCTGCTATAATGCTGGTGGTGTGGTGTTGCACTCCAGA
AAAATATGATACACTGCGAAGTGTATATTATACTGTGTCAGACGAGATGA
TTTCAGATTTCGACATGCCGGGGATTTATTATTATGTTGACTGAGTCTTT
TCTGGGCACCTTCACACCCCTTGACCACACACAGCAGCAGCTGTGAGCGG
TGTTTGTTTGTCCTTTTGCCCGTATCTGAGTGCAGCTGGAATGCTGCTCA
ACTCCCAACGTGATGGGGTTCGGGAATTTTTTGTTTCTGTCCCCGTCCCG
AAGAGACTGGCTGATATAAAAAAAATGAAATATTATGATTTTTTTTTATG
CATATATCACCTCAGAAGTTCCAGAAGGGTTAGCCTACTAGTTGTAAGGT
CGTAGGTTCGATTCTCTCTGAGAGCGTTTCTTGCGACTTGACAGTGGAAA
GCGAATTACTCGTGAGTAGAACAGAGGGAAGGGATTGCTGTACCCGACTC
GCATTAACCCTTCTGGGACCAGGCTATTTCGGCGGGGGGCAACCCGAATA
GCCCGGGTTCTAAAAAAAACTGAACCAGCCGGTATTCCACCGCCCAAGAA
CCAGACACAAAAAAAACAGCTGTTGGCTCCGCGTGCACAAATCATGAAAA
AACTGACAAGTGAGACCGCACATTTATTCAGCCAGGGTCACCAACAAGGT
CCGCAACACTGGTAGCGTCCCTGGAGACTAGGAGAGTTAACCGATGATCG
CGATGCCGCCTCCTGCTCTCAAATATCGCGAAATGATGACTGGTCATCAC
AGGCCTTCCTCTCCCATACCCAAATGAAATCAAGTCAATTTAGGAATCGC
GCATTTTTTAGCGCATTTTTGTTCACTACTGTAGCCCACAACCTTCATTT
GGTCAATTTGGGGCACAACAGGATGCATGTAGCAGTCCCTGCGGTGGCTG
GAAGACTGCTGTGTGTTGCTCGTGTTCGATGCTGCTGGTGCGGTGTTTTC
TTTTATAATCAATGTTGTACAACAAACTCCATCGCGTTCTTTGGTTCGGG
ATTTGTTGTTTTCGTCCCCATCCCGGACTCCATCCCCATGTCCCGACGAG
ACCGCCCCAAGAAAAAAAAAAATGAACAATTTATTGTAAACAAAAAAATC
ACTCAAGACCCAGAAAGGTTAAAAACCAAAGGCACGTACCGCAGGAGGAA
GGTATGAGCAATAAAACAAAATAAAAATGAAAAAGAAAAAGCTCGTGTGT
GACCTTCCTCCTGTGTGACCCCGGCTGAAGCACCCACATCATACCGAAAG
GTGTAGACTGTTGCCCAGAATAAAGGAGATGACACACACACTCTGTACAA
TGGTTGGTTGGAAACACGAAAGGACAAAAAAGGAAGCAGCAGCAGTGGAC
GGGCCATCAAGCCATCAACCTCGGTCCACGGGGGTATGGTCCTGCTGTGT
TCCTTGAGAGTAAACAGGGCTCTTCACATTTGATTTTGAGAGAGGGTGTG
CGATTGTGTTTTGAGTTTAGTTCCGTTGCCGGCGCCAACTACGATCAAGA
TACATGATGAGTAAAGTTTTAGTTCTACGGAGATCAGGTGGGGTACATTG
ATAGAGAGAGAACCGACCATGATCATTTGCCGGGGGATACTTGTACGTAC
TGGGGGGTATTTGGCGTGGGTATCACGTAACGGGGCTACACGGTACACCA
TGGATTGCTCCCCAGTATTGCTTGCCACTTGGACTCGGTGCTTCGCTCGT
GTTACTCGGCTCTGTGCTGCGATGCGTGGCCCAATAGACCCAAACTGAGC
CAGTTAACCAACGAACCATCCACATTTCACGAAGCGTGCCACAGCCCGGC
ACACGAATGATCTACCACCATGCACGCGACCAACGGTTACTACAGTATAC
AGACACCCACAGCAGCAGTTTGGTCTCGTCTCTTCACAGCAAGTAGATGA
TTCACCAGCAGTGTCTAAGGAGCTTCTACCGCAACGACTGCTTCTGAACG
AGGCACGCAAAAGCACAGCACGATGAGGATATGGCTTTCGCGGGTAAAGG
CGCAGCAGAGGCGGGCGCACCCAGTGCCAAAGGTCAGCCTCGCAAACGTG
AAACACTAATTTCTGTTTGCCCTGTCCCTGACCTCGTATTGTTTCCGCGT
GCGTGTATTGCTGTTGCTGCTGCCGCCGCTCGTCCTTGTTGTTCACAACA
CAGGCCGGGGACGTTCCGATCGTGGGCAGGAACTGGAGCGTGCAGGAGCT
GCGGAGAAAGAGCTTTGAAGACCTTCACAAACTCTGGTAAGATTATAGAC
CACGAAGACCGAAGCTTGTTGTGTTGTTTTACCTTGTGTGATGAACCTGC
GGCAATTACAATACCCGGACGTAGCGTACACGACGCTGTGGGTGAAAACA
CACGTTGACATTAAGCCACATTTTGCCTACCTGTCCGCAGGTCTGCACAA
ACTCTGGTGAGATTTTAGACTGCGTACGAAGACGAAACGTTGCTCCTTCC
TTGCCCTTTGTGGTAGACCTACAGTGACTACAATACCCTAGAAGTAAACT
CTTGTCAACTGCAAGCCATGTTTTGCTGAGCAAACCGTAGGCCGGCGAAA
GCCCCTCGCAGAATCATACGGCAGTAAGATATTATATGACCGTTTGCTTG
CCCGAAACTCTTGTGAGATTAAGCCGAGCTTGATTAGACGGCAACCTAAC
CACAATAACACCAAGCCTTGTTTGATACGAAGTCGGCAAAGCAACACCAA
CACAACTACGCAGTTACAGCCACACGAGGAGAACCTCTGTAGCCTAAATT
ATACGAAGTAAGTAATTTTTCCTTCCAATTCCCAGCTACTACAAAAGTGC
GACTTACGGATAAACCCTATCGTCGCTCTCAAACAGCTGTACAATAGCCC
AGAGCGACATTCGAGACCCTTTTTTGAACTCCTGCCAGAAACAGTGTTTG
CGAATAAGTAGGAAAAGAGACAAGGCAGGGAGAGAAAGAGACCGACAGAG
ACAGAAAGAGACAGAAAGAGACAGAGAGCCCCCGCCGCCTCTCACCTCTC
ACAACGCACTTGCTTGGTCCTCTTTTCTGAAGCGAATCCCTCCTCTTCGA
GTGCCGCGCGCGCAACCAACACCCATTTCCATGCGCGATTAGTTTTTGGT
TTCCCTCTGAACTTTCGCTTGTATCAAGAATACAAATGTTCGCCACCACG
GGATCTCAATGCCCGTTGGATGACTTTTGGCTCCACTAGCTGTGCGTGTG
CGCTTGTGTTTGTGCGTGTGTGTACATGTGCGTGTGTGCGTGCGTGTGTG
TGTATGGTTGCGTGTGGGGATGTGAAGTGTGCTGGTGCGCTTTTTGTCAT
CCGCGTCAAGTCACCACACGGTGGGTCGTCCCGCATTTTTTCTGCTGGTT
TGCCGACGATTGGACACCGCCCGCCTGCCCGCCCCCGCAGGTTCGTCCTG
TACAAGGAGAAAAACATGCTCCAGACGCAGGTGGTGTTGAGCCGACGATC
GAAGGTGCCCATTCCCGCTGGCGACCGCAGGCAAAAGGTCCGTCCGTCGG
GTGAACCGTCAGGATGTCGTTGTACCGTATGCTGTTGCCATGCGAATATT
CTTAGTAATTCCTAACCTTGCATAACCCGCCCCCCCTCCTCCCCCCGCCC
CGCCCGGCAATTGGTAGAGTCTCTTATGTAGAGGAATATTTTCTGTTGGA
CCTTGTCATACATTCTCGTGTGTCGAGAACCCATAACGCGCTGATCTCCG
CGCTCACCCCCCGCCCTTTCTCCGAATATGACAAGAGTGCAGTCTAGAGA
GAGAGATCTTGACTTTTTCACCTGGTCACACATACTTACGTCGTGAACCG
ACAAAACGCGGATTTCCGCCCTCCCCACCCCCCCCGCTCTTTTCTGAGAG
TATGATGAAAGTGCCGTCTAGGGGGGGATATGTTCTGTCACATGGTCATA
CATACTCGTGTGTCGAGAACCCACAACACGCGGATCTCGGGTATATATCC
GGCCATCACGAAAGTTGTTTTTTGTTACCGGTTCGAGCAGTACGGAACGG
GGAGGTGCTGTATATCATAGAAGTCGGAACGATTTATTTCGGGAACAATA
CACAACAGCAGTTTTCGCACCTAAATTTATGGTGCCGCCTCTGTAGGCTG
AGTATTGGCCTGTCATACACATACCTGGGACACTTCGACCGCTGTCATGT
TCCCGGAAGCACCGATTGCGGCATCCAGAAACGAGCTGTTCGTGATTGTT
GTCCGGACCGACTGCTGTTGCTGTACATCACCTCCATTTCCGCATCGAAG
AGGCCTCTACATAGCAGTGCAATTTTCCGATCATACTACCCCCGTTATGT
GTACGTGACCAGGTGAAGCGATCGATGAAGGCGATCAAGGTGGTCGTGGG
AGAGCGCCAACGCGTGAAGCGGGCTGTTATCCACGAGCGCCAGATGGCAG
CCCAGCGCGAGAAACGGGAGGCGGCGGCAGCTGCCGCAGCAGCCGCGGCG
GAGAGCGAGGAGGCCGCATTGGAAGAGGGAAAAAGTCAAGGAGCGGCGAC
GACTTGGTAGGGCAGATTGTTGCGGGCCGCAGTGACACCCATACCCTCTG
GAGCACCGAAAGGTGAAATGAAATCGAGAGGCCGCATTGGAAGAGGGGAA
AAGTCAAGGAGCGGCGACGAATTTGTGGGTGGATTGCTGCGGGCCGTATT
GACACTCGTACCTTCTCAAGCACCCGAAGGTGAACTGGCGAGAGAGGCTG
CAGTGAAGGAGGAAAAAGATGAAGGAGCGGCGCCGACTTTGTAGGTGGAT
TGCTGCGGGCCGCATTGACACTTTTACCTTCTGAAAGCACCCGAAGATGA
ATGGGGAGCAAGAGGCCGCATTGGACGAGATCAAGGAGCGGCGACGACTC
TGTAGGTAGATTACTGTGGGCCGCATTGACATTCATACCTTCTGAAAGCA
CCCGAAGGTGATTGGGGAGCGAGAGGCCGCATTGGAAGAGATCAAGGAGC
GGTGACGACTCTGTAGGTAGATTGCTGTGGGCCGCATTGATTTTCATACC
TTCCTAAGCACCCGAAAGGTGAGATGGCGCGAGGGAGCAACGGGGGCAGC
AGCCGCGGCGGCCGAGAGCAAGGAGGCCGCAGTGAAAATGAGTCACCAGG
AGTGGCGACTCATGCTGTTCGAGTGGATTGCAGCCGACACCATTCAGATG
TCGTCACGAAGAATCAGAAAATTACAGCAGTGCGTGTGGGCGCACAAAAG
TTGACGCACAAAAAAGTTGCCTCCAGGAGGAGTAAAATGAATACAGGTGT
TGCTTGTGGACACACACTCGGATAGAGGGCAGAGCCGTCGTTGTGAGCCC
GCCCCCCGCAAAGCGTCAGAGACGGAAGCAAAGCTCGGCAAAAACGCCAG
CAAGCCACTTCTCGGCAGGAGAGAATGTCGGCGGTTCAGGCAGGCGGGGG
CCACAGCGAGGCCGGGTCTCGTGGGGTGAGGGTGCCCGGTCCTCTATTTT
CCCGTCCGACTATTTTTTCTTCCCAAAGAATGCTCCGTCGCCGTTACTTG
AAATGCGATGTTCTAAGTTCGGGAGGGCAAAGTGCCCAGCGAAAGCTGTG
ACCATTGAGGATGGGAAACCTCACCTATGAGATACAGTAGCCACTGCTGT
CGCTGCCCCGCAGTGGTGCGGTTTGGTCAGGTACGCGGGAGGCGAAGTTT
GTACCAGATTTTGTCCGGTCGCTTGTATCGGATAGACCCTCTTGTTGGCC
ATTGCTCGAAAACAAGCAACCGTTCTTGCGAGGTGGATCTCTTGTTCGTC
GGGGGCAGTGTAAACATCTCCCGACCACCCTGGAGCAAAAAGAGGAGATT
CTTTTTCGCTGCTTGTACATGGCTGATGAAATGGGACCCCATTGGCCTGG
GTACCAGGATGTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig617:82855..91017+

>mRNA_P-littoralis_Contig617.31.2 ID=mRNA_P-littoralis_Contig617.31.2|Name=mRNA_P-littoralis_Contig617.31.2|organism=Pylaiella littoralis U1_48|type=CDS|length=717bp|location=Sequence derived from alignment at P-littoralis_Contig617:82855..91017+ (Pylaiella littoralis U1_48)
ATGGCATCGATGCGTGCCGGGGTGGTCTCGCTCTTACGTCGAGCTTTTGC
TGCTCGTCGGCCACCATTAGGCATGACCTCTTGCTCTTTTTCCTCCTCCG
TTCGTTGTTTGACGGCCGTCTCAGTACCCTCCTCGCTTCGTCACTCCGGC
AGCAGCAGCAGGGTAGGACCGCAGTGCTCCAGTAGTGGCAGCAGCAAGCA
GCAGCACAAGCACAAGGAGAAGCAGCAGCAGCGGTCAGGGTTGTCGACGC
TGCGAAGGGGGCTGAGCGGGCCTCATTCGGCGAGGCTGCGGCTGCCCATG
CGAGGCCTAGAGGAGTTCCGCGATCCAGAGGTTGTCAAGGCCGGGGACGT
TCCGATCGTGGGCAGGAACTGGAGCGTGCAGGAGCTGCGGAGAAAGAGCT
TTGAAGACCTTCACAAACTCTGGTTCGTCCTGTACAAGGAGAAAAACATG
CTCCAGACGCAGGTGGTGTTGAGCCGACGATCGAAGGTGCCCATTCCCGC
TGGCGACCGCAGGCAAAAGGTGAAGCGATCGATGAAGGCGATCAAGGTGG
TCGTGGGAGAGCGCCAACGCGTGAAGCGGGCTGTTATCCACGAGCGCCAG
ATGGCAGCCCAGCGCGAGAAACGGGAGGCGGCGGCAGCTGCCGCAGCAGC
CGCGGCGGAGAGCGAGGAGGCCGCATTGGAAGAGGGAAAAAGTCAAGGAG
CGGCGACGACTTGGTAG
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